The complete mitochondrial genome of Potomida acarnanica (Kobelt, 1879)

Detalhes bibliográficos
Autor(a) principal: Matos, Ana
Data de Publicação: 2024
Outros Autores: Gomes-dos-Santos, André, Teixeira, Amílcar, Varandas, Simone, Sousa, Ronaldo, Karaouzas, Ioannis, Zogaris, Stamatis, Froufe, Elsa, Lopes-Lima, Manuel
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10198/29981
Resumo: Freshwater mussels (Bivalvia, Unionida) play essential roles in the well-functioning of ecosystems, even providing essential services to humans. However, these bivalves face numerous threats (e.g. habitat loss and fragmentation, pollution, introduction of invasive species, and climate change) which have already led to the extinction of many populations. This underscores the need to fully characterize the biology of these species, particularly those, such as Potomida acarnanica, that are still poorly studied. This study presents the first mitogenome of P. acarnanica (Kobelt, 1879), an endemic species of Greece with a distribution limited to only two river basins. The mitochondrial genome of a P. acarnanica specimen, collected at Pamisos River (Peloponnese, Greece), was sequenced by Illumina high-throughput sequencing. This mitogenome (16,101 bp) is characterized by 13 protein-coding genes, 22 transfer RNA and 2 ribosomal RNA genes. The size of this mitogenome is within the range of another Potomida mitogenome already published for the species Potomida littoralis. In the phylogenetic inference, P. acarnanica was recovered as monophyletic with P. littoralis mitogenome in the Lamprotulini tribe, as expected. This genomic resource will assist in genetically characterizing the species, potentially benefiting future evolutionary studies and conservation efforts.
id RCAP_0444ac39c9ba720fbf162c4fb7750d47
oai_identifier_str oai:bibliotecadigital.ipb.pt:10198/29981
network_acronym_str RCAP
network_name_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository_id_str 7160
spelling The complete mitochondrial genome of Potomida acarnanica (Kobelt, 1879)Freshwater musselsMitogenomePhylogenyFreshwater mussels (Bivalvia, Unionida) play essential roles in the well-functioning of ecosystems, even providing essential services to humans. However, these bivalves face numerous threats (e.g. habitat loss and fragmentation, pollution, introduction of invasive species, and climate change) which have already led to the extinction of many populations. This underscores the need to fully characterize the biology of these species, particularly those, such as Potomida acarnanica, that are still poorly studied. This study presents the first mitogenome of P. acarnanica (Kobelt, 1879), an endemic species of Greece with a distribution limited to only two river basins. The mitochondrial genome of a P. acarnanica specimen, collected at Pamisos River (Peloponnese, Greece), was sequenced by Illumina high-throughput sequencing. This mitogenome (16,101 bp) is characterized by 13 protein-coding genes, 22 transfer RNA and 2 ribosomal RNA genes. The size of this mitogenome is within the range of another Potomida mitogenome already published for the species Potomida littoralis. In the phylogenetic inference, P. acarnanica was recovered as monophyletic with P. littoralis mitogenome in the Lamprotulini tribe, as expected. This genomic resource will assist in genetically characterizing the species, potentially benefiting future evolutionary studies and conservation efforts.Foundation for Science and Technology (FCT) supported EF by project reference CEECINST/00027/2021/CP2789/CT0003 and DOI identifier https://doi.org/10.54499/CEECINST/00027/2021/CP2789/CT0003, and MLL (2020.03608.CEECIND).Taylor & FrancisBiblioteca Digital do IPBMatos, AnaGomes-dos-Santos, AndréTeixeira, AmílcarVarandas, SimoneSousa, RonaldoKaraouzas, IoannisZogaris, StamatisFroufe, ElsaLopes-Lima, Manuel2024-07-01T10:45:36Z20242024-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10198/29981engMatos, Ana; Gomes-dos-Santos, André; Teixeira, Amílcar; Varandas, Simone; Sousa, Ronaldo; Karaouzas, Ioannis; Zogaris, Stamatis; Froufe, Elsa; Lopes-Lima, Manuel (2024). The complete mitochondrial genome of Potomida acarnanica (Kobelt, 1879). Mitochondrial DNA Part B. ISSN 2380-2359. 9:6, p. 696-7002380-235910.1080/23802359.2024.2353271info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-07-03T01:18:55Zoai:bibliotecadigital.ipb.pt:10198/29981Portal AgregadorONGhttps://www.rcaap.pt/oai/openairemluisa.alvim@gmail.comopendoar:71602024-07-03T01:18:55Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv The complete mitochondrial genome of Potomida acarnanica (Kobelt, 1879)
title The complete mitochondrial genome of Potomida acarnanica (Kobelt, 1879)
spellingShingle The complete mitochondrial genome of Potomida acarnanica (Kobelt, 1879)
Matos, Ana
Freshwater mussels
Mitogenome
Phylogeny
title_short The complete mitochondrial genome of Potomida acarnanica (Kobelt, 1879)
title_full The complete mitochondrial genome of Potomida acarnanica (Kobelt, 1879)
title_fullStr The complete mitochondrial genome of Potomida acarnanica (Kobelt, 1879)
title_full_unstemmed The complete mitochondrial genome of Potomida acarnanica (Kobelt, 1879)
title_sort The complete mitochondrial genome of Potomida acarnanica (Kobelt, 1879)
author Matos, Ana
author_facet Matos, Ana
Gomes-dos-Santos, André
Teixeira, Amílcar
Varandas, Simone
Sousa, Ronaldo
Karaouzas, Ioannis
Zogaris, Stamatis
Froufe, Elsa
Lopes-Lima, Manuel
author_role author
author2 Gomes-dos-Santos, André
Teixeira, Amílcar
Varandas, Simone
Sousa, Ronaldo
Karaouzas, Ioannis
Zogaris, Stamatis
Froufe, Elsa
Lopes-Lima, Manuel
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Biblioteca Digital do IPB
dc.contributor.author.fl_str_mv Matos, Ana
Gomes-dos-Santos, André
Teixeira, Amílcar
Varandas, Simone
Sousa, Ronaldo
Karaouzas, Ioannis
Zogaris, Stamatis
Froufe, Elsa
Lopes-Lima, Manuel
dc.subject.por.fl_str_mv Freshwater mussels
Mitogenome
Phylogeny
topic Freshwater mussels
Mitogenome
Phylogeny
description Freshwater mussels (Bivalvia, Unionida) play essential roles in the well-functioning of ecosystems, even providing essential services to humans. However, these bivalves face numerous threats (e.g. habitat loss and fragmentation, pollution, introduction of invasive species, and climate change) which have already led to the extinction of many populations. This underscores the need to fully characterize the biology of these species, particularly those, such as Potomida acarnanica, that are still poorly studied. This study presents the first mitogenome of P. acarnanica (Kobelt, 1879), an endemic species of Greece with a distribution limited to only two river basins. The mitochondrial genome of a P. acarnanica specimen, collected at Pamisos River (Peloponnese, Greece), was sequenced by Illumina high-throughput sequencing. This mitogenome (16,101 bp) is characterized by 13 protein-coding genes, 22 transfer RNA and 2 ribosomal RNA genes. The size of this mitogenome is within the range of another Potomida mitogenome already published for the species Potomida littoralis. In the phylogenetic inference, P. acarnanica was recovered as monophyletic with P. littoralis mitogenome in the Lamprotulini tribe, as expected. This genomic resource will assist in genetically characterizing the species, potentially benefiting future evolutionary studies and conservation efforts.
publishDate 2024
dc.date.none.fl_str_mv 2024-07-01T10:45:36Z
2024
2024-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10198/29981
url http://hdl.handle.net/10198/29981
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Matos, Ana; Gomes-dos-Santos, André; Teixeira, Amílcar; Varandas, Simone; Sousa, Ronaldo; Karaouzas, Ioannis; Zogaris, Stamatis; Froufe, Elsa; Lopes-Lima, Manuel (2024). The complete mitochondrial genome of Potomida acarnanica (Kobelt, 1879). Mitochondrial DNA Part B. ISSN 2380-2359. 9:6, p. 696-700
2380-2359
10.1080/23802359.2024.2353271
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Taylor & Francis
publisher.none.fl_str_mv Taylor & Francis
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv mluisa.alvim@gmail.com
_version_ 1817546230609215488