The complete mitochondrial genome of Potomida acarnanica (Kobelt, 1879)
Autor(a) principal: | |
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Data de Publicação: | 2024 |
Outros Autores: | , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10198/29981 |
Resumo: | Freshwater mussels (Bivalvia, Unionida) play essential roles in the well-functioning of ecosystems, even providing essential services to humans. However, these bivalves face numerous threats (e.g. habitat loss and fragmentation, pollution, introduction of invasive species, and climate change) which have already led to the extinction of many populations. This underscores the need to fully characterize the biology of these species, particularly those, such as Potomida acarnanica, that are still poorly studied. This study presents the first mitogenome of P. acarnanica (Kobelt, 1879), an endemic species of Greece with a distribution limited to only two river basins. The mitochondrial genome of a P. acarnanica specimen, collected at Pamisos River (Peloponnese, Greece), was sequenced by Illumina high-throughput sequencing. This mitogenome (16,101 bp) is characterized by 13 protein-coding genes, 22 transfer RNA and 2 ribosomal RNA genes. The size of this mitogenome is within the range of another Potomida mitogenome already published for the species Potomida littoralis. In the phylogenetic inference, P. acarnanica was recovered as monophyletic with P. littoralis mitogenome in the Lamprotulini tribe, as expected. This genomic resource will assist in genetically characterizing the species, potentially benefiting future evolutionary studies and conservation efforts. |
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The complete mitochondrial genome of Potomida acarnanica (Kobelt, 1879)Freshwater musselsMitogenomePhylogenyFreshwater mussels (Bivalvia, Unionida) play essential roles in the well-functioning of ecosystems, even providing essential services to humans. However, these bivalves face numerous threats (e.g. habitat loss and fragmentation, pollution, introduction of invasive species, and climate change) which have already led to the extinction of many populations. This underscores the need to fully characterize the biology of these species, particularly those, such as Potomida acarnanica, that are still poorly studied. This study presents the first mitogenome of P. acarnanica (Kobelt, 1879), an endemic species of Greece with a distribution limited to only two river basins. The mitochondrial genome of a P. acarnanica specimen, collected at Pamisos River (Peloponnese, Greece), was sequenced by Illumina high-throughput sequencing. This mitogenome (16,101 bp) is characterized by 13 protein-coding genes, 22 transfer RNA and 2 ribosomal RNA genes. The size of this mitogenome is within the range of another Potomida mitogenome already published for the species Potomida littoralis. In the phylogenetic inference, P. acarnanica was recovered as monophyletic with P. littoralis mitogenome in the Lamprotulini tribe, as expected. This genomic resource will assist in genetically characterizing the species, potentially benefiting future evolutionary studies and conservation efforts.Foundation for Science and Technology (FCT) supported EF by project reference CEECINST/00027/2021/CP2789/CT0003 and DOI identifier https://doi.org/10.54499/CEECINST/00027/2021/CP2789/CT0003, and MLL (2020.03608.CEECIND).Taylor & FrancisBiblioteca Digital do IPBMatos, AnaGomes-dos-Santos, AndréTeixeira, AmílcarVarandas, SimoneSousa, RonaldoKaraouzas, IoannisZogaris, StamatisFroufe, ElsaLopes-Lima, Manuel2024-07-01T10:45:36Z20242024-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10198/29981engMatos, Ana; Gomes-dos-Santos, André; Teixeira, Amílcar; Varandas, Simone; Sousa, Ronaldo; Karaouzas, Ioannis; Zogaris, Stamatis; Froufe, Elsa; Lopes-Lima, Manuel (2024). The complete mitochondrial genome of Potomida acarnanica (Kobelt, 1879). Mitochondrial DNA Part B. ISSN 2380-2359. 9:6, p. 696-7002380-235910.1080/23802359.2024.2353271info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-07-03T01:18:55Zoai:bibliotecadigital.ipb.pt:10198/29981Portal AgregadorONGhttps://www.rcaap.pt/oai/openairemluisa.alvim@gmail.comopendoar:71602024-07-03T01:18:55Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
The complete mitochondrial genome of Potomida acarnanica (Kobelt, 1879) |
title |
The complete mitochondrial genome of Potomida acarnanica (Kobelt, 1879) |
spellingShingle |
The complete mitochondrial genome of Potomida acarnanica (Kobelt, 1879) Matos, Ana Freshwater mussels Mitogenome Phylogeny |
title_short |
The complete mitochondrial genome of Potomida acarnanica (Kobelt, 1879) |
title_full |
The complete mitochondrial genome of Potomida acarnanica (Kobelt, 1879) |
title_fullStr |
The complete mitochondrial genome of Potomida acarnanica (Kobelt, 1879) |
title_full_unstemmed |
The complete mitochondrial genome of Potomida acarnanica (Kobelt, 1879) |
title_sort |
The complete mitochondrial genome of Potomida acarnanica (Kobelt, 1879) |
author |
Matos, Ana |
author_facet |
Matos, Ana Gomes-dos-Santos, André Teixeira, Amílcar Varandas, Simone Sousa, Ronaldo Karaouzas, Ioannis Zogaris, Stamatis Froufe, Elsa Lopes-Lima, Manuel |
author_role |
author |
author2 |
Gomes-dos-Santos, André Teixeira, Amílcar Varandas, Simone Sousa, Ronaldo Karaouzas, Ioannis Zogaris, Stamatis Froufe, Elsa Lopes-Lima, Manuel |
author2_role |
author author author author author author author author |
dc.contributor.none.fl_str_mv |
Biblioteca Digital do IPB |
dc.contributor.author.fl_str_mv |
Matos, Ana Gomes-dos-Santos, André Teixeira, Amílcar Varandas, Simone Sousa, Ronaldo Karaouzas, Ioannis Zogaris, Stamatis Froufe, Elsa Lopes-Lima, Manuel |
dc.subject.por.fl_str_mv |
Freshwater mussels Mitogenome Phylogeny |
topic |
Freshwater mussels Mitogenome Phylogeny |
description |
Freshwater mussels (Bivalvia, Unionida) play essential roles in the well-functioning of ecosystems, even providing essential services to humans. However, these bivalves face numerous threats (e.g. habitat loss and fragmentation, pollution, introduction of invasive species, and climate change) which have already led to the extinction of many populations. This underscores the need to fully characterize the biology of these species, particularly those, such as Potomida acarnanica, that are still poorly studied. This study presents the first mitogenome of P. acarnanica (Kobelt, 1879), an endemic species of Greece with a distribution limited to only two river basins. The mitochondrial genome of a P. acarnanica specimen, collected at Pamisos River (Peloponnese, Greece), was sequenced by Illumina high-throughput sequencing. This mitogenome (16,101 bp) is characterized by 13 protein-coding genes, 22 transfer RNA and 2 ribosomal RNA genes. The size of this mitogenome is within the range of another Potomida mitogenome already published for the species Potomida littoralis. In the phylogenetic inference, P. acarnanica was recovered as monophyletic with P. littoralis mitogenome in the Lamprotulini tribe, as expected. This genomic resource will assist in genetically characterizing the species, potentially benefiting future evolutionary studies and conservation efforts. |
publishDate |
2024 |
dc.date.none.fl_str_mv |
2024-07-01T10:45:36Z 2024 2024-01-01T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10198/29981 |
url |
http://hdl.handle.net/10198/29981 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Matos, Ana; Gomes-dos-Santos, André; Teixeira, Amílcar; Varandas, Simone; Sousa, Ronaldo; Karaouzas, Ioannis; Zogaris, Stamatis; Froufe, Elsa; Lopes-Lima, Manuel (2024). The complete mitochondrial genome of Potomida acarnanica (Kobelt, 1879). Mitochondrial DNA Part B. ISSN 2380-2359. 9:6, p. 696-700 2380-2359 10.1080/23802359.2024.2353271 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Taylor & Francis |
publisher.none.fl_str_mv |
Taylor & Francis |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
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Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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RCAAP |
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RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
repository.mail.fl_str_mv |
mluisa.alvim@gmail.com |
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1817546230609215488 |