Comparative transcriptome analysis between original and evolved recombinant lactose-consuming Saccharomyces cerevisiae strains
Autor(a) principal: | |
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Data de Publicação: | 2008 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/1822/8669 |
Resumo: | The engineering of Saccharomyces cerevisiae strains for lactose utilization has been attempted with the intent of developing high productivity processes for alcoholic fermentation of cheese whey. A recombinant S. cerevisiae flocculent strain that efficiently ferments lactose to ethanol was previously obtained by evolutionary engineering of an original recombinant that displayed poor lactose fermentation performance. We compared the transcriptomes of the original and the evolved recombinant strains growing in lactose, using cDNA microarrays. Microarray data revealed 173 genes whose expression levels differed more than 1.5-fold. About half of these genes were related to RNA-mediated transposition. We also found genes involved in DNA repair and recombination mechanisms, response to stress, chromatin remodeling, cell cycle control, mitosis regulation, glycolysis and alcoholic fermentation. These transcriptomic data are in agreement with some of the previously identified physiological and molecular differences between the recombinants, and point to further hypotheses to explain those differences. |
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Comparative transcriptome analysis between original and evolved recombinant lactose-consuming Saccharomyces cerevisiae strainscDNA microarraysEvolutionary engineeringLactose fermentationRecombinant Saccharomyces cerevisiaeThe engineering of Saccharomyces cerevisiae strains for lactose utilization has been attempted with the intent of developing high productivity processes for alcoholic fermentation of cheese whey. A recombinant S. cerevisiae flocculent strain that efficiently ferments lactose to ethanol was previously obtained by evolutionary engineering of an original recombinant that displayed poor lactose fermentation performance. We compared the transcriptomes of the original and the evolved recombinant strains growing in lactose, using cDNA microarrays. Microarray data revealed 173 genes whose expression levels differed more than 1.5-fold. About half of these genes were related to RNA-mediated transposition. We also found genes involved in DNA repair and recombination mechanisms, response to stress, chromatin remodeling, cell cycle control, mitosis regulation, glycolysis and alcoholic fermentation. These transcriptomic data are in agreement with some of the previously identified physiological and molecular differences between the recombinants, and point to further hypotheses to explain those differences.(undefined)Wiley-VCH VerlagUniversidade do MinhoGuimarães, Pedro M. R.Le Berre, V.Sokol, SergueiFrançois, J.Teixeira, J. A.Domingues, Lucília2008-122008-12-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/1822/8669eng“Biotechnology Journal”. ISSN 1860-6768. 3:12 (Dec. 2008) 1591–1597.1860-676810.1002/biot.20080011119039778www.biotechnology-journal.cominfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:17:32Zoai:repositorium.sdum.uminho.pt:1822/8669Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:10:12.103591Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Comparative transcriptome analysis between original and evolved recombinant lactose-consuming Saccharomyces cerevisiae strains |
title |
Comparative transcriptome analysis between original and evolved recombinant lactose-consuming Saccharomyces cerevisiae strains |
spellingShingle |
Comparative transcriptome analysis between original and evolved recombinant lactose-consuming Saccharomyces cerevisiae strains Guimarães, Pedro M. R. cDNA microarrays Evolutionary engineering Lactose fermentation Recombinant Saccharomyces cerevisiae |
title_short |
Comparative transcriptome analysis between original and evolved recombinant lactose-consuming Saccharomyces cerevisiae strains |
title_full |
Comparative transcriptome analysis between original and evolved recombinant lactose-consuming Saccharomyces cerevisiae strains |
title_fullStr |
Comparative transcriptome analysis between original and evolved recombinant lactose-consuming Saccharomyces cerevisiae strains |
title_full_unstemmed |
Comparative transcriptome analysis between original and evolved recombinant lactose-consuming Saccharomyces cerevisiae strains |
title_sort |
Comparative transcriptome analysis between original and evolved recombinant lactose-consuming Saccharomyces cerevisiae strains |
author |
Guimarães, Pedro M. R. |
author_facet |
Guimarães, Pedro M. R. Le Berre, V. Sokol, Serguei François, J. Teixeira, J. A. Domingues, Lucília |
author_role |
author |
author2 |
Le Berre, V. Sokol, Serguei François, J. Teixeira, J. A. Domingues, Lucília |
author2_role |
author author author author author |
dc.contributor.none.fl_str_mv |
Universidade do Minho |
dc.contributor.author.fl_str_mv |
Guimarães, Pedro M. R. Le Berre, V. Sokol, Serguei François, J. Teixeira, J. A. Domingues, Lucília |
dc.subject.por.fl_str_mv |
cDNA microarrays Evolutionary engineering Lactose fermentation Recombinant Saccharomyces cerevisiae |
topic |
cDNA microarrays Evolutionary engineering Lactose fermentation Recombinant Saccharomyces cerevisiae |
description |
The engineering of Saccharomyces cerevisiae strains for lactose utilization has been attempted with the intent of developing high productivity processes for alcoholic fermentation of cheese whey. A recombinant S. cerevisiae flocculent strain that efficiently ferments lactose to ethanol was previously obtained by evolutionary engineering of an original recombinant that displayed poor lactose fermentation performance. We compared the transcriptomes of the original and the evolved recombinant strains growing in lactose, using cDNA microarrays. Microarray data revealed 173 genes whose expression levels differed more than 1.5-fold. About half of these genes were related to RNA-mediated transposition. We also found genes involved in DNA repair and recombination mechanisms, response to stress, chromatin remodeling, cell cycle control, mitosis regulation, glycolysis and alcoholic fermentation. These transcriptomic data are in agreement with some of the previously identified physiological and molecular differences between the recombinants, and point to further hypotheses to explain those differences. |
publishDate |
2008 |
dc.date.none.fl_str_mv |
2008-12 2008-12-01T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/1822/8669 |
url |
http://hdl.handle.net/1822/8669 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
“Biotechnology Journal”. ISSN 1860-6768. 3:12 (Dec. 2008) 1591–1597. 1860-6768 10.1002/biot.200800111 19039778 www.biotechnology-journal.com |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Wiley-VCH Verlag |
publisher.none.fl_str_mv |
Wiley-VCH Verlag |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
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Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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1799132529696964608 |