Study of genetic diversity of three portuguese cattle breeds by 93 micro satellite markers

Detalhes bibliográficos
Autor(a) principal: Almeida, Armandina dos Santos
Data de Publicação: 2012
Outros Autores: Araújo, José Pedro, Medurogac, Ivica, Cadavez, Vasco
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10198/17608
Resumo: The objectives of this work were to assess the genetic diversity within and between three Portuguese cattle breeds using 93 microsatellites markers. Blood samples were collected from 50 individuals of each breed, and ninety-three microsatellites were analysed to get thorough information about genetic diversity and interrelationships among three Portuguese cattle breeds: Mirandesa (MIR), Maronesa (MAR), and Barrosã (BAR). Estimates of genetic variability, observed (Ho) and expected heterozygosity (He), allelic richness for each locus were determined. The alleles were classified in three classes according to their frequency: common alleles (observed in the three sub-populations), private alleles (alleles observed in one sub-population) and rare alleles (non-private alleles with a frequency < 0.01 over the whole population). The number of rare alleles found was 52 in MAR, 33 in MIR, and 30 in BAR. The number of private alleles found was 5 in MIR and BAR, and 2 in MAR. The MIR showed the lowest genetic diversity, and the highest genetic distance to the other two breeds. The three breeds could be considered as genetically distinct populations. This study shows that measures should be taken in order to preserve the genetic diversity of MIR, MAR, and BAR cattle breeds.
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spelling Study of genetic diversity of three portuguese cattle breeds by 93 micro satellite markersCattleConservationGenetic diversityMicrosatellitesThe objectives of this work were to assess the genetic diversity within and between three Portuguese cattle breeds using 93 microsatellites markers. Blood samples were collected from 50 individuals of each breed, and ninety-three microsatellites were analysed to get thorough information about genetic diversity and interrelationships among three Portuguese cattle breeds: Mirandesa (MIR), Maronesa (MAR), and Barrosã (BAR). Estimates of genetic variability, observed (Ho) and expected heterozygosity (He), allelic richness for each locus were determined. The alleles were classified in three classes according to their frequency: common alleles (observed in the three sub-populations), private alleles (alleles observed in one sub-population) and rare alleles (non-private alleles with a frequency < 0.01 over the whole population). The number of rare alleles found was 52 in MAR, 33 in MIR, and 30 in BAR. The number of private alleles found was 5 in MIR and BAR, and 2 in MAR. The MIR showed the lowest genetic diversity, and the highest genetic distance to the other two breeds. The three breeds could be considered as genetically distinct populations. This study shows that measures should be taken in order to preserve the genetic diversity of MIR, MAR, and BAR cattle breeds.Biblioteca Digital do IPBAlmeida, Armandina dos SantosAraújo, José PedroMedurogac, IvicaCadavez, Vasco2018-05-08T16:26:23Z20122012-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10198/17608engAlmeida, Armandina; Araújo, José P.P.; Medurogac, Ivica; Cadavez, Vasco (2012). Study of genetic diversity of three portuguese cattle breeds by 93 micro satellite markers. Scientific Papers. Series D. Animal Science. ISSN 2285-5750. 56, p. 41-472285-5750info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-11-21T10:40:17Zoai:bibliotecadigital.ipb.pt:10198/17608Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T23:07:19.929441Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Study of genetic diversity of three portuguese cattle breeds by 93 micro satellite markers
title Study of genetic diversity of three portuguese cattle breeds by 93 micro satellite markers
spellingShingle Study of genetic diversity of three portuguese cattle breeds by 93 micro satellite markers
Almeida, Armandina dos Santos
Cattle
Conservation
Genetic diversity
Microsatellites
title_short Study of genetic diversity of three portuguese cattle breeds by 93 micro satellite markers
title_full Study of genetic diversity of three portuguese cattle breeds by 93 micro satellite markers
title_fullStr Study of genetic diversity of three portuguese cattle breeds by 93 micro satellite markers
title_full_unstemmed Study of genetic diversity of three portuguese cattle breeds by 93 micro satellite markers
title_sort Study of genetic diversity of three portuguese cattle breeds by 93 micro satellite markers
author Almeida, Armandina dos Santos
author_facet Almeida, Armandina dos Santos
Araújo, José Pedro
Medurogac, Ivica
Cadavez, Vasco
author_role author
author2 Araújo, José Pedro
Medurogac, Ivica
Cadavez, Vasco
author2_role author
author
author
dc.contributor.none.fl_str_mv Biblioteca Digital do IPB
dc.contributor.author.fl_str_mv Almeida, Armandina dos Santos
Araújo, José Pedro
Medurogac, Ivica
Cadavez, Vasco
dc.subject.por.fl_str_mv Cattle
Conservation
Genetic diversity
Microsatellites
topic Cattle
Conservation
Genetic diversity
Microsatellites
description The objectives of this work were to assess the genetic diversity within and between three Portuguese cattle breeds using 93 microsatellites markers. Blood samples were collected from 50 individuals of each breed, and ninety-three microsatellites were analysed to get thorough information about genetic diversity and interrelationships among three Portuguese cattle breeds: Mirandesa (MIR), Maronesa (MAR), and Barrosã (BAR). Estimates of genetic variability, observed (Ho) and expected heterozygosity (He), allelic richness for each locus were determined. The alleles were classified in three classes according to their frequency: common alleles (observed in the three sub-populations), private alleles (alleles observed in one sub-population) and rare alleles (non-private alleles with a frequency < 0.01 over the whole population). The number of rare alleles found was 52 in MAR, 33 in MIR, and 30 in BAR. The number of private alleles found was 5 in MIR and BAR, and 2 in MAR. The MIR showed the lowest genetic diversity, and the highest genetic distance to the other two breeds. The three breeds could be considered as genetically distinct populations. This study shows that measures should be taken in order to preserve the genetic diversity of MIR, MAR, and BAR cattle breeds.
publishDate 2012
dc.date.none.fl_str_mv 2012
2012-01-01T00:00:00Z
2018-05-08T16:26:23Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10198/17608
url http://hdl.handle.net/10198/17608
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Almeida, Armandina; Araújo, José P.P.; Medurogac, Ivica; Cadavez, Vasco (2012). Study of genetic diversity of three portuguese cattle breeds by 93 micro satellite markers. Scientific Papers. Series D. Animal Science. ISSN 2285-5750. 56, p. 41-47
2285-5750
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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