New solutions to capture and enrich bacteria from complex samples

Detalhes bibliográficos
Autor(a) principal: Sande, Maria
Data de Publicação: 2020
Outros Autores: Çaykara, Tugçe, Silva, Carla Joana, Rodrigues, L. R.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/1822/65541
Resumo: Current solutions to diagnose bacterial infections though reliable are often time-consuming, laborious and need a specific laboratory setting. There is an unmet need for bedside accurate diagnosis of infectious diseases with a short turnaround time. Moreover, low-cost diagnostics will greatly benefit regions with poor resources. Immunoassays and molecular techniques have been used to develop highly sensitive diagnosis solutions but retaining many of the abovementioned limitations. The detection of bacteria in a biological sample can be enhanced by a previous step of capture and enrichment. This will ease the following process enabling a more sensitive detection and increasing the possibility of a conclusive identification in the downstream diagnosis. This review explores the latest developments regarding the initial steps of capture and enrichment of bacteria from complex samples with the ultimate goal of designing low cost and reliable diagnostics for bacterial infections. Some solutions use specific ligands tethered to magnetic constructs for separation under magnetic fields, microfluidic platforms and engineered nano-patterned surfaces to trap bacteria. Bulk acoustics, advection and nano-filters comprise some of the most innovative solutions for bacteria enrichment.
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spelling New solutions to capture and enrich bacteria from complex samplesDiagnosticsBacteria captureEnrichmentDetection limitMicrofuidicsMagnetic beadsMagnetic nanoparticlesAcoustophoresisAptamerBacteriophagePeptidePoint-of-careNano-patterningMicrofluidicsScience & TechnologyCurrent solutions to diagnose bacterial infections though reliable are often time-consuming, laborious and need a specific laboratory setting. There is an unmet need for bedside accurate diagnosis of infectious diseases with a short turnaround time. Moreover, low-cost diagnostics will greatly benefit regions with poor resources. Immunoassays and molecular techniques have been used to develop highly sensitive diagnosis solutions but retaining many of the abovementioned limitations. The detection of bacteria in a biological sample can be enhanced by a previous step of capture and enrichment. This will ease the following process enabling a more sensitive detection and increasing the possibility of a conclusive identification in the downstream diagnosis. This review explores the latest developments regarding the initial steps of capture and enrichment of bacteria from complex samples with the ultimate goal of designing low cost and reliable diagnostics for bacterial infections. Some solutions use specific ligands tethered to magnetic constructs for separation under magnetic fields, microfluidic platforms and engineered nano-patterned surfaces to trap bacteria. Bulk acoustics, advection and nano-filters comprise some of the most innovative solutions for bacteria enrichment.This research is affiliated to the VibrANT project that received funding from the EU Horizon 2020 Research and Innovation Programme under the Marie Sklowdowska-Curie Grant, agreement no 765042. In addition, MGS, TC and LRR acknowledge the fnancial support from Fundação para a Ciência e Tecnologia (FCT) under the scope of the strategic funding of UID/BIO/04469/2020 unit and COMPETE 2020 (POCI-01-0145-FEDER-006684), through national funds and where applicable co-fnanced by the FEDER, within the PT2020 Partnership Agreement. The same authors also acknowledge BioTecNorte operation (NORTE-01-0145-FEDER-000004) funded by the European Regional Development Fund under the scope of Norte2020-Programa Operacional Regional do Norte.info:eu-repo/semantics/publishedVersionSpringer NatureUniversidade do MinhoSande, MariaÇaykara, TugçeSilva, Carla JoanaRodrigues, L. R.2020-02-052020-02-05T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/1822/65541engSande, Maria; Çaykara, Tugçe; Silva, Carla Joana; Rodrigues, Lígia R., New solutions to capture and enrich bacteria from complex samples. Medical Microbiology and Immunology, 209, 335-341, 20200300-85841432-183110.1007/s00430-020-00659-132025887https://www.springer.com/journal/430info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:07:24Zoai:repositorium.sdum.uminho.pt:1822/65541Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T18:58:23.093663Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv New solutions to capture and enrich bacteria from complex samples
title New solutions to capture and enrich bacteria from complex samples
spellingShingle New solutions to capture and enrich bacteria from complex samples
Sande, Maria
Diagnostics
Bacteria capture
Enrichment
Detection limit
Microfuidics
Magnetic beads
Magnetic nanoparticles
Acoustophoresis
Aptamer
Bacteriophage
Peptide
Point-of-care
Nano-patterning
Microfluidics
Science & Technology
title_short New solutions to capture and enrich bacteria from complex samples
title_full New solutions to capture and enrich bacteria from complex samples
title_fullStr New solutions to capture and enrich bacteria from complex samples
title_full_unstemmed New solutions to capture and enrich bacteria from complex samples
title_sort New solutions to capture and enrich bacteria from complex samples
author Sande, Maria
author_facet Sande, Maria
Çaykara, Tugçe
Silva, Carla Joana
Rodrigues, L. R.
author_role author
author2 Çaykara, Tugçe
Silva, Carla Joana
Rodrigues, L. R.
author2_role author
author
author
dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv Sande, Maria
Çaykara, Tugçe
Silva, Carla Joana
Rodrigues, L. R.
dc.subject.por.fl_str_mv Diagnostics
Bacteria capture
Enrichment
Detection limit
Microfuidics
Magnetic beads
Magnetic nanoparticles
Acoustophoresis
Aptamer
Bacteriophage
Peptide
Point-of-care
Nano-patterning
Microfluidics
Science & Technology
topic Diagnostics
Bacteria capture
Enrichment
Detection limit
Microfuidics
Magnetic beads
Magnetic nanoparticles
Acoustophoresis
Aptamer
Bacteriophage
Peptide
Point-of-care
Nano-patterning
Microfluidics
Science & Technology
description Current solutions to diagnose bacterial infections though reliable are often time-consuming, laborious and need a specific laboratory setting. There is an unmet need for bedside accurate diagnosis of infectious diseases with a short turnaround time. Moreover, low-cost diagnostics will greatly benefit regions with poor resources. Immunoassays and molecular techniques have been used to develop highly sensitive diagnosis solutions but retaining many of the abovementioned limitations. The detection of bacteria in a biological sample can be enhanced by a previous step of capture and enrichment. This will ease the following process enabling a more sensitive detection and increasing the possibility of a conclusive identification in the downstream diagnosis. This review explores the latest developments regarding the initial steps of capture and enrichment of bacteria from complex samples with the ultimate goal of designing low cost and reliable diagnostics for bacterial infections. Some solutions use specific ligands tethered to magnetic constructs for separation under magnetic fields, microfluidic platforms and engineered nano-patterned surfaces to trap bacteria. Bulk acoustics, advection and nano-filters comprise some of the most innovative solutions for bacteria enrichment.
publishDate 2020
dc.date.none.fl_str_mv 2020-02-05
2020-02-05T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/1822/65541
url http://hdl.handle.net/1822/65541
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Sande, Maria; Çaykara, Tugçe; Silva, Carla Joana; Rodrigues, Lígia R., New solutions to capture and enrich bacteria from complex samples. Medical Microbiology and Immunology, 209, 335-341, 2020
0300-8584
1432-1831
10.1007/s00430-020-00659-1
32025887
https://www.springer.com/journal/430
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Springer Nature
publisher.none.fl_str_mv Springer Nature
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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