New solutions to capture and enrich bacteria from complex samples
Autor(a) principal: | |
---|---|
Data de Publicação: | 2020 |
Outros Autores: | , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/1822/65541 |
Resumo: | Current solutions to diagnose bacterial infections though reliable are often time-consuming, laborious and need a specific laboratory setting. There is an unmet need for bedside accurate diagnosis of infectious diseases with a short turnaround time. Moreover, low-cost diagnostics will greatly benefit regions with poor resources. Immunoassays and molecular techniques have been used to develop highly sensitive diagnosis solutions but retaining many of the abovementioned limitations. The detection of bacteria in a biological sample can be enhanced by a previous step of capture and enrichment. This will ease the following process enabling a more sensitive detection and increasing the possibility of a conclusive identification in the downstream diagnosis. This review explores the latest developments regarding the initial steps of capture and enrichment of bacteria from complex samples with the ultimate goal of designing low cost and reliable diagnostics for bacterial infections. Some solutions use specific ligands tethered to magnetic constructs for separation under magnetic fields, microfluidic platforms and engineered nano-patterned surfaces to trap bacteria. Bulk acoustics, advection and nano-filters comprise some of the most innovative solutions for bacteria enrichment. |
id |
RCAP_0d6a680cebb1458a4d9e6a237a68abfc |
---|---|
oai_identifier_str |
oai:repositorium.sdum.uminho.pt:1822/65541 |
network_acronym_str |
RCAP |
network_name_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository_id_str |
7160 |
spelling |
New solutions to capture and enrich bacteria from complex samplesDiagnosticsBacteria captureEnrichmentDetection limitMicrofuidicsMagnetic beadsMagnetic nanoparticlesAcoustophoresisAptamerBacteriophagePeptidePoint-of-careNano-patterningMicrofluidicsScience & TechnologyCurrent solutions to diagnose bacterial infections though reliable are often time-consuming, laborious and need a specific laboratory setting. There is an unmet need for bedside accurate diagnosis of infectious diseases with a short turnaround time. Moreover, low-cost diagnostics will greatly benefit regions with poor resources. Immunoassays and molecular techniques have been used to develop highly sensitive diagnosis solutions but retaining many of the abovementioned limitations. The detection of bacteria in a biological sample can be enhanced by a previous step of capture and enrichment. This will ease the following process enabling a more sensitive detection and increasing the possibility of a conclusive identification in the downstream diagnosis. This review explores the latest developments regarding the initial steps of capture and enrichment of bacteria from complex samples with the ultimate goal of designing low cost and reliable diagnostics for bacterial infections. Some solutions use specific ligands tethered to magnetic constructs for separation under magnetic fields, microfluidic platforms and engineered nano-patterned surfaces to trap bacteria. Bulk acoustics, advection and nano-filters comprise some of the most innovative solutions for bacteria enrichment.This research is affiliated to the VibrANT project that received funding from the EU Horizon 2020 Research and Innovation Programme under the Marie Sklowdowska-Curie Grant, agreement no 765042. In addition, MGS, TC and LRR acknowledge the fnancial support from Fundação para a Ciência e Tecnologia (FCT) under the scope of the strategic funding of UID/BIO/04469/2020 unit and COMPETE 2020 (POCI-01-0145-FEDER-006684), through national funds and where applicable co-fnanced by the FEDER, within the PT2020 Partnership Agreement. The same authors also acknowledge BioTecNorte operation (NORTE-01-0145-FEDER-000004) funded by the European Regional Development Fund under the scope of Norte2020-Programa Operacional Regional do Norte.info:eu-repo/semantics/publishedVersionSpringer NatureUniversidade do MinhoSande, MariaÇaykara, TugçeSilva, Carla JoanaRodrigues, L. R.2020-02-052020-02-05T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/1822/65541engSande, Maria; Çaykara, Tugçe; Silva, Carla Joana; Rodrigues, Lígia R., New solutions to capture and enrich bacteria from complex samples. Medical Microbiology and Immunology, 209, 335-341, 20200300-85841432-183110.1007/s00430-020-00659-132025887https://www.springer.com/journal/430info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:07:24Zoai:repositorium.sdum.uminho.pt:1822/65541Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T18:58:23.093663Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
New solutions to capture and enrich bacteria from complex samples |
title |
New solutions to capture and enrich bacteria from complex samples |
spellingShingle |
New solutions to capture and enrich bacteria from complex samples Sande, Maria Diagnostics Bacteria capture Enrichment Detection limit Microfuidics Magnetic beads Magnetic nanoparticles Acoustophoresis Aptamer Bacteriophage Peptide Point-of-care Nano-patterning Microfluidics Science & Technology |
title_short |
New solutions to capture and enrich bacteria from complex samples |
title_full |
New solutions to capture and enrich bacteria from complex samples |
title_fullStr |
New solutions to capture and enrich bacteria from complex samples |
title_full_unstemmed |
New solutions to capture and enrich bacteria from complex samples |
title_sort |
New solutions to capture and enrich bacteria from complex samples |
author |
Sande, Maria |
author_facet |
Sande, Maria Çaykara, Tugçe Silva, Carla Joana Rodrigues, L. R. |
author_role |
author |
author2 |
Çaykara, Tugçe Silva, Carla Joana Rodrigues, L. R. |
author2_role |
author author author |
dc.contributor.none.fl_str_mv |
Universidade do Minho |
dc.contributor.author.fl_str_mv |
Sande, Maria Çaykara, Tugçe Silva, Carla Joana Rodrigues, L. R. |
dc.subject.por.fl_str_mv |
Diagnostics Bacteria capture Enrichment Detection limit Microfuidics Magnetic beads Magnetic nanoparticles Acoustophoresis Aptamer Bacteriophage Peptide Point-of-care Nano-patterning Microfluidics Science & Technology |
topic |
Diagnostics Bacteria capture Enrichment Detection limit Microfuidics Magnetic beads Magnetic nanoparticles Acoustophoresis Aptamer Bacteriophage Peptide Point-of-care Nano-patterning Microfluidics Science & Technology |
description |
Current solutions to diagnose bacterial infections though reliable are often time-consuming, laborious and need a specific laboratory setting. There is an unmet need for bedside accurate diagnosis of infectious diseases with a short turnaround time. Moreover, low-cost diagnostics will greatly benefit regions with poor resources. Immunoassays and molecular techniques have been used to develop highly sensitive diagnosis solutions but retaining many of the abovementioned limitations. The detection of bacteria in a biological sample can be enhanced by a previous step of capture and enrichment. This will ease the following process enabling a more sensitive detection and increasing the possibility of a conclusive identification in the downstream diagnosis. This review explores the latest developments regarding the initial steps of capture and enrichment of bacteria from complex samples with the ultimate goal of designing low cost and reliable diagnostics for bacterial infections. Some solutions use specific ligands tethered to magnetic constructs for separation under magnetic fields, microfluidic platforms and engineered nano-patterned surfaces to trap bacteria. Bulk acoustics, advection and nano-filters comprise some of the most innovative solutions for bacteria enrichment. |
publishDate |
2020 |
dc.date.none.fl_str_mv |
2020-02-05 2020-02-05T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/1822/65541 |
url |
http://hdl.handle.net/1822/65541 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Sande, Maria; Çaykara, Tugçe; Silva, Carla Joana; Rodrigues, Lígia R., New solutions to capture and enrich bacteria from complex samples. Medical Microbiology and Immunology, 209, 335-341, 2020 0300-8584 1432-1831 10.1007/s00430-020-00659-1 32025887 https://www.springer.com/journal/430 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Springer Nature |
publisher.none.fl_str_mv |
Springer Nature |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
instname_str |
Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
repository.mail.fl_str_mv |
|
_version_ |
1799132373556658176 |