The evolution of metazoan α-carbonic anhydrases and their roles in calcium carbonate biomineralization

Detalhes bibliográficos
Autor(a) principal: Le Roy, Nathalie
Data de Publicação: 2014
Outros Autores: Jackson, Daniel J, Marie, Benjamin, Ramos-Silva, Paula, Marin, Frédéric
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.7/386
Resumo: The carbonic anhydrase (CA; EC 4.2.1.1) superfamily is a class of ubiquitous metallo-enzymes that catalyse the reversible hydration of carbon dioxide. The ?-CA family, present in all metazoan clades, is a key enzyme involved in a wide range of physiological functions including pH regulation, respiration, photosynthesis, and biocalcification. This paper reviews the evolution of the ?-CA family, with an emphasis on metazoan ?-CA members involved in biocalcification. Phylogenetic analyses reveal a complex evolutionary history of ?-CAs, and suggest ?-CA was independently co-opted into a variety of skeleton forming roles (e.g. as a provider of HCO3? ions, a structural protein, a nucleation activator, etc.) in multiple metazoan lineages. This evolutionary history is most likely the result of multiple gene duplications coupled with the insertion of repetitive or non-repetitive low-complexity domains (RLCDs/LCDs). These domains, of largely unknown function, appear to be lineage-specific, and provide further support for the hypothesis of independent recruitment of ?-CAs to diverse metazoan biocalcification processes. An analysis of ?-CA sequences associated with biocalcification processes indicates that the domains involved in the activity and conformation of the active site are extremely conserved among metazoans.
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spelling The evolution of metazoan α-carbonic anhydrases and their roles in calcium carbonate biomineralizationα -Carbonic anhydraseMetazoaBiocalcificationBiomineralizationMolecular evolutionLow complexity domains (LCDs)Repetitive low complexity domains (RLCDs)The carbonic anhydrase (CA; EC 4.2.1.1) superfamily is a class of ubiquitous metallo-enzymes that catalyse the reversible hydration of carbon dioxide. The ?-CA family, present in all metazoan clades, is a key enzyme involved in a wide range of physiological functions including pH regulation, respiration, photosynthesis, and biocalcification. This paper reviews the evolution of the ?-CA family, with an emphasis on metazoan ?-CA members involved in biocalcification. Phylogenetic analyses reveal a complex evolutionary history of ?-CAs, and suggest ?-CA was independently co-opted into a variety of skeleton forming roles (e.g. as a provider of HCO3? ions, a structural protein, a nucleation activator, etc.) in multiple metazoan lineages. This evolutionary history is most likely the result of multiple gene duplications coupled with the insertion of repetitive or non-repetitive low-complexity domains (RLCDs/LCDs). These domains, of largely unknown function, appear to be lineage-specific, and provide further support for the hypothesis of independent recruitment of ?-CAs to diverse metazoan biocalcification processes. An analysis of ?-CA sequences associated with biocalcification processes indicates that the domains involved in the activity and conformation of the active site are extremely conserved among metazoans.PhD Fellowship from the Ministère de l' Education Nationale et de la Recherche (contract number 27264–2007), ANR project (ACCRO-Earth, ref. BLAN06-2_159971, coordinator Gilles Ramstein, LSCE, Gif/Yvette, France) for years 2007–2011, SU (INTERRVIE project year 2010), COST network TD0903 "Biomineralix", ECTS (internship grant, 2012).BioMed CentralARCALe Roy, NathalieJackson, Daniel JMarie, BenjaminRamos-Silva, PaulaMarin, Frédéric2015-10-08T10:42:17Z2014-10-172014-10-17T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.7/386engLe Roy et al. : The evolution of metazoan α -carbonic anhydrases and their roles in calcium carbonate biomineralization. Frontiers in Zoology 2014 11 :75.10.1186/s12983-014-0075-8info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2022-11-29T14:34:46Zoai:arca.igc.gulbenkian.pt:10400.7/386Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T16:11:41.178826Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv The evolution of metazoan α-carbonic anhydrases and their roles in calcium carbonate biomineralization
title The evolution of metazoan α-carbonic anhydrases and their roles in calcium carbonate biomineralization
spellingShingle The evolution of metazoan α-carbonic anhydrases and their roles in calcium carbonate biomineralization
Le Roy, Nathalie
α -Carbonic anhydrase
Metazoa
Biocalcification
Biomineralization
Molecular evolution
Low complexity domains (LCDs)
Repetitive low complexity domains (RLCDs)
title_short The evolution of metazoan α-carbonic anhydrases and their roles in calcium carbonate biomineralization
title_full The evolution of metazoan α-carbonic anhydrases and their roles in calcium carbonate biomineralization
title_fullStr The evolution of metazoan α-carbonic anhydrases and their roles in calcium carbonate biomineralization
title_full_unstemmed The evolution of metazoan α-carbonic anhydrases and their roles in calcium carbonate biomineralization
title_sort The evolution of metazoan α-carbonic anhydrases and their roles in calcium carbonate biomineralization
author Le Roy, Nathalie
author_facet Le Roy, Nathalie
Jackson, Daniel J
Marie, Benjamin
Ramos-Silva, Paula
Marin, Frédéric
author_role author
author2 Jackson, Daniel J
Marie, Benjamin
Ramos-Silva, Paula
Marin, Frédéric
author2_role author
author
author
author
dc.contributor.none.fl_str_mv ARCA
dc.contributor.author.fl_str_mv Le Roy, Nathalie
Jackson, Daniel J
Marie, Benjamin
Ramos-Silva, Paula
Marin, Frédéric
dc.subject.por.fl_str_mv α -Carbonic anhydrase
Metazoa
Biocalcification
Biomineralization
Molecular evolution
Low complexity domains (LCDs)
Repetitive low complexity domains (RLCDs)
topic α -Carbonic anhydrase
Metazoa
Biocalcification
Biomineralization
Molecular evolution
Low complexity domains (LCDs)
Repetitive low complexity domains (RLCDs)
description The carbonic anhydrase (CA; EC 4.2.1.1) superfamily is a class of ubiquitous metallo-enzymes that catalyse the reversible hydration of carbon dioxide. The ?-CA family, present in all metazoan clades, is a key enzyme involved in a wide range of physiological functions including pH regulation, respiration, photosynthesis, and biocalcification. This paper reviews the evolution of the ?-CA family, with an emphasis on metazoan ?-CA members involved in biocalcification. Phylogenetic analyses reveal a complex evolutionary history of ?-CAs, and suggest ?-CA was independently co-opted into a variety of skeleton forming roles (e.g. as a provider of HCO3? ions, a structural protein, a nucleation activator, etc.) in multiple metazoan lineages. This evolutionary history is most likely the result of multiple gene duplications coupled with the insertion of repetitive or non-repetitive low-complexity domains (RLCDs/LCDs). These domains, of largely unknown function, appear to be lineage-specific, and provide further support for the hypothesis of independent recruitment of ?-CAs to diverse metazoan biocalcification processes. An analysis of ?-CA sequences associated with biocalcification processes indicates that the domains involved in the activity and conformation of the active site are extremely conserved among metazoans.
publishDate 2014
dc.date.none.fl_str_mv 2014-10-17
2014-10-17T00:00:00Z
2015-10-08T10:42:17Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.7/386
url http://hdl.handle.net/10400.7/386
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Le Roy et al. : The evolution of metazoan α -carbonic anhydrases and their roles in calcium carbonate biomineralization. Frontiers in Zoology 2014 11 :75.
10.1186/s12983-014-0075-8
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv BioMed Central
publisher.none.fl_str_mv BioMed Central
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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