Dynamics of Histone H3 Deposition In Vivo Reveal a Nucleosome Gap-Filling Mechanism for H3.3 to Maintain Chromatin Integrity

Detalhes bibliográficos
Autor(a) principal: Ray-Gallet, Dominique
Data de Publicação: 2011
Outros Autores: Woolfe, Adam, Vassias, Isabelle, Pellentz, Céline, Lacoste, Nicolas, Puri, Aastha, Schultz, David C., Pchelintsev, Nikolay A., Adams, Peter D., Jansen, Lars E.T., Almouzni, Geneviève
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.7/806
Resumo: Establishment of a proper chromatin landscape is central to genome function. Here, we explain H3 variant distribution by specific targeting and dynamics of deposition involving the CAF-1 and HIRA histone chaperones. Impairing replicative H3.1 incorporation via CAF-1 enables an alternative H3.3 deposition at replication sites via HIRA. Conversely, the H3.3 incorporation throughout the cell cycle via HIRA cannot be replaced by H3.1. ChIP-seq analyses reveal correlation between HIRA-dependent H3.3 accumulation and RNA pol II at transcription sites and specific regulatory elements, further supported by their biochemical association. The HIRA complex shows unique DNA binding properties, and depletion of HIRA increases DNA sensitivity to nucleases. We propose that protective nucleosome gap filling of naked DNA by HIRA leads to a broad distribution of H3.3, and HIRA association with Pol II ensures local H3.3 enrichment at specific sites. We discuss the importance of this H3.3 deposition as a salvage pathway to maintain chromatin integrity.
id RCAP_0f6b09005a14946e6e0485e703d9a127
oai_identifier_str oai:arca.igc.gulbenkian.pt:10400.7/806
network_acronym_str RCAP
network_name_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository_id_str 7160
spelling Dynamics of Histone H3 Deposition In Vivo Reveal a Nucleosome Gap-Filling Mechanism for H3.3 to Maintain Chromatin IntegrityCell Cycle ProteinsChromatin Assembly Factor-1DNA ReplicationDeoxyribonucleasesHeLa CellsHistone ChaperonesHistonesHumansMolecular ChaperonesNucleosomesRNA Polymerase IITranscription FactorsEstablishment of a proper chromatin landscape is central to genome function. Here, we explain H3 variant distribution by specific targeting and dynamics of deposition involving the CAF-1 and HIRA histone chaperones. Impairing replicative H3.1 incorporation via CAF-1 enables an alternative H3.3 deposition at replication sites via HIRA. Conversely, the H3.3 incorporation throughout the cell cycle via HIRA cannot be replaced by H3.1. ChIP-seq analyses reveal correlation between HIRA-dependent H3.3 accumulation and RNA pol II at transcription sites and specific regulatory elements, further supported by their biochemical association. The HIRA complex shows unique DNA binding properties, and depletion of HIRA increases DNA sensitivity to nucleases. We propose that protective nucleosome gap filling of naked DNA by HIRA leads to a broad distribution of H3.3, and HIRA association with Pol II ensures local H3.3 enrichment at specific sites. We discuss the importance of this H3.3 deposition as a salvage pathway to maintain chromatin integrity.Cell PressARCARay-Gallet, DominiqueWoolfe, AdamVassias, IsabellePellentz, CélineLacoste, NicolasPuri, AasthaSchultz, David C.Pchelintsev, Nikolay A.Adams, Peter D.Jansen, Lars E.T.Almouzni, Geneviève2017-11-15T12:24:37Z2011-12-232011-12-23T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.7/806eng10.1016/j.molcel.2011.12.006info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-11-21T14:21:49Zoai:arca.igc.gulbenkian.pt:10400.7/806Portal AgregadorONGhttps://www.rcaap.pt/oai/openairemluisa.alvim@gmail.comopendoar:71602024-11-21T14:21:49Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Dynamics of Histone H3 Deposition In Vivo Reveal a Nucleosome Gap-Filling Mechanism for H3.3 to Maintain Chromatin Integrity
title Dynamics of Histone H3 Deposition In Vivo Reveal a Nucleosome Gap-Filling Mechanism for H3.3 to Maintain Chromatin Integrity
spellingShingle Dynamics of Histone H3 Deposition In Vivo Reveal a Nucleosome Gap-Filling Mechanism for H3.3 to Maintain Chromatin Integrity
Ray-Gallet, Dominique
Cell Cycle Proteins
Chromatin Assembly Factor-1
DNA Replication
Deoxyribonucleases
HeLa Cells
Histone Chaperones
Histones
Humans
Molecular Chaperones
Nucleosomes
RNA Polymerase II
Transcription Factors
title_short Dynamics of Histone H3 Deposition In Vivo Reveal a Nucleosome Gap-Filling Mechanism for H3.3 to Maintain Chromatin Integrity
title_full Dynamics of Histone H3 Deposition In Vivo Reveal a Nucleosome Gap-Filling Mechanism for H3.3 to Maintain Chromatin Integrity
title_fullStr Dynamics of Histone H3 Deposition In Vivo Reveal a Nucleosome Gap-Filling Mechanism for H3.3 to Maintain Chromatin Integrity
title_full_unstemmed Dynamics of Histone H3 Deposition In Vivo Reveal a Nucleosome Gap-Filling Mechanism for H3.3 to Maintain Chromatin Integrity
title_sort Dynamics of Histone H3 Deposition In Vivo Reveal a Nucleosome Gap-Filling Mechanism for H3.3 to Maintain Chromatin Integrity
author Ray-Gallet, Dominique
author_facet Ray-Gallet, Dominique
Woolfe, Adam
Vassias, Isabelle
Pellentz, Céline
Lacoste, Nicolas
Puri, Aastha
Schultz, David C.
Pchelintsev, Nikolay A.
Adams, Peter D.
Jansen, Lars E.T.
Almouzni, Geneviève
author_role author
author2 Woolfe, Adam
Vassias, Isabelle
Pellentz, Céline
Lacoste, Nicolas
Puri, Aastha
Schultz, David C.
Pchelintsev, Nikolay A.
Adams, Peter D.
Jansen, Lars E.T.
Almouzni, Geneviève
author2_role author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv ARCA
dc.contributor.author.fl_str_mv Ray-Gallet, Dominique
Woolfe, Adam
Vassias, Isabelle
Pellentz, Céline
Lacoste, Nicolas
Puri, Aastha
Schultz, David C.
Pchelintsev, Nikolay A.
Adams, Peter D.
Jansen, Lars E.T.
Almouzni, Geneviève
dc.subject.por.fl_str_mv Cell Cycle Proteins
Chromatin Assembly Factor-1
DNA Replication
Deoxyribonucleases
HeLa Cells
Histone Chaperones
Histones
Humans
Molecular Chaperones
Nucleosomes
RNA Polymerase II
Transcription Factors
topic Cell Cycle Proteins
Chromatin Assembly Factor-1
DNA Replication
Deoxyribonucleases
HeLa Cells
Histone Chaperones
Histones
Humans
Molecular Chaperones
Nucleosomes
RNA Polymerase II
Transcription Factors
description Establishment of a proper chromatin landscape is central to genome function. Here, we explain H3 variant distribution by specific targeting and dynamics of deposition involving the CAF-1 and HIRA histone chaperones. Impairing replicative H3.1 incorporation via CAF-1 enables an alternative H3.3 deposition at replication sites via HIRA. Conversely, the H3.3 incorporation throughout the cell cycle via HIRA cannot be replaced by H3.1. ChIP-seq analyses reveal correlation between HIRA-dependent H3.3 accumulation and RNA pol II at transcription sites and specific regulatory elements, further supported by their biochemical association. The HIRA complex shows unique DNA binding properties, and depletion of HIRA increases DNA sensitivity to nucleases. We propose that protective nucleosome gap filling of naked DNA by HIRA leads to a broad distribution of H3.3, and HIRA association with Pol II ensures local H3.3 enrichment at specific sites. We discuss the importance of this H3.3 deposition as a salvage pathway to maintain chromatin integrity.
publishDate 2011
dc.date.none.fl_str_mv 2011-12-23
2011-12-23T00:00:00Z
2017-11-15T12:24:37Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.7/806
url http://hdl.handle.net/10400.7/806
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1016/j.molcel.2011.12.006
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Cell Press
publisher.none.fl_str_mv Cell Press
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv mluisa.alvim@gmail.com
_version_ 1817549562421706752