A versatile method for bladder segmentation in computed tomography two-dimensional images under adverse conditions

Detalhes bibliográficos
Autor(a) principal: João Ribeiro Pinto
Data de Publicação: 2017
Outros Autores: João Manuel R. S. Tavares
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: https://hdl.handle.net/10216/106304
Resumo: This article presents the design and evaluation of an algorithm for urinary bladder segmentation in medical images, from contrastless computed tomography studies of patients suffering from bladder wall tumours. These situations require versatile methods of segmentation, able to adapt to the structural changes the tumours provoke in the bladder wall, reflected as irregularities on the images obtained, creating adversities to the segmentation process. This semi-automatic method uses fuzzy c-means clustering, a Gaussian-curve-based intensity transformation, and active contour models, requiring only the physician's input of a single seed point for each anatomical view, in order to segment the bladder volume in all frames that include it. The performance of the method was evaluated on eight patients of The Cancer Genome Atlas-Urothelial Bladder Carcinoma collection, achieving approximately 79% of successful segmentations for small tumour patients (below 2.0 cm of diameter) and approximately 72% between 2.0 and 2.9 cm. Successful segmentations for small tumour patients presented an average of 3.7 mm Hausdorff distance and 91.0% degree of overlap. The promising performance attained, especially for small tumour patients, revealed a high potential of this method to serve as basis for an effective early-stage bladder wall tumour computer-aided diagnosis system.
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spelling A versatile method for bladder segmentation in computed tomography two-dimensional images under adverse conditionsCiências Tecnológicas, Ciências médicas e da saúdeTechnological sciences, Medical and Health sciencesThis article presents the design and evaluation of an algorithm for urinary bladder segmentation in medical images, from contrastless computed tomography studies of patients suffering from bladder wall tumours. These situations require versatile methods of segmentation, able to adapt to the structural changes the tumours provoke in the bladder wall, reflected as irregularities on the images obtained, creating adversities to the segmentation process. This semi-automatic method uses fuzzy c-means clustering, a Gaussian-curve-based intensity transformation, and active contour models, requiring only the physician's input of a single seed point for each anatomical view, in order to segment the bladder volume in all frames that include it. The performance of the method was evaluated on eight patients of The Cancer Genome Atlas-Urothelial Bladder Carcinoma collection, achieving approximately 79% of successful segmentations for small tumour patients (below 2.0 cm of diameter) and approximately 72% between 2.0 and 2.9 cm. Successful segmentations for small tumour patients presented an average of 3.7 mm Hausdorff distance and 91.0% degree of overlap. The promising performance attained, especially for small tumour patients, revealed a high potential of this method to serve as basis for an effective early-stage bladder wall tumour computer-aided diagnosis system.2017-09-012017-09-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleimage/pngapplication/pdfhttps://hdl.handle.net/10216/106304eng0954-411910.1177/0954411917714294João Ribeiro PintoJoão Manuel R. S. Tavaresinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-09-27T07:11:15Zoai:repositorio-aberto.up.pt:10216/106304Portal AgregadorONGhttps://www.rcaap.pt/oai/openairemluisa.alvim@gmail.comopendoar:71602024-09-27T07:11:15Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv A versatile method for bladder segmentation in computed tomography two-dimensional images under adverse conditions
title A versatile method for bladder segmentation in computed tomography two-dimensional images under adverse conditions
spellingShingle A versatile method for bladder segmentation in computed tomography two-dimensional images under adverse conditions
João Ribeiro Pinto
Ciências Tecnológicas, Ciências médicas e da saúde
Technological sciences, Medical and Health sciences
title_short A versatile method for bladder segmentation in computed tomography two-dimensional images under adverse conditions
title_full A versatile method for bladder segmentation in computed tomography two-dimensional images under adverse conditions
title_fullStr A versatile method for bladder segmentation in computed tomography two-dimensional images under adverse conditions
title_full_unstemmed A versatile method for bladder segmentation in computed tomography two-dimensional images under adverse conditions
title_sort A versatile method for bladder segmentation in computed tomography two-dimensional images under adverse conditions
author João Ribeiro Pinto
author_facet João Ribeiro Pinto
João Manuel R. S. Tavares
author_role author
author2 João Manuel R. S. Tavares
author2_role author
dc.contributor.author.fl_str_mv João Ribeiro Pinto
João Manuel R. S. Tavares
dc.subject.por.fl_str_mv Ciências Tecnológicas, Ciências médicas e da saúde
Technological sciences, Medical and Health sciences
topic Ciências Tecnológicas, Ciências médicas e da saúde
Technological sciences, Medical and Health sciences
description This article presents the design and evaluation of an algorithm for urinary bladder segmentation in medical images, from contrastless computed tomography studies of patients suffering from bladder wall tumours. These situations require versatile methods of segmentation, able to adapt to the structural changes the tumours provoke in the bladder wall, reflected as irregularities on the images obtained, creating adversities to the segmentation process. This semi-automatic method uses fuzzy c-means clustering, a Gaussian-curve-based intensity transformation, and active contour models, requiring only the physician's input of a single seed point for each anatomical view, in order to segment the bladder volume in all frames that include it. The performance of the method was evaluated on eight patients of The Cancer Genome Atlas-Urothelial Bladder Carcinoma collection, achieving approximately 79% of successful segmentations for small tumour patients (below 2.0 cm of diameter) and approximately 72% between 2.0 and 2.9 cm. Successful segmentations for small tumour patients presented an average of 3.7 mm Hausdorff distance and 91.0% degree of overlap. The promising performance attained, especially for small tumour patients, revealed a high potential of this method to serve as basis for an effective early-stage bladder wall tumour computer-aided diagnosis system.
publishDate 2017
dc.date.none.fl_str_mv 2017-09-01
2017-09-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.uri.fl_str_mv https://hdl.handle.net/10216/106304
url https://hdl.handle.net/10216/106304
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 0954-4119
10.1177/0954411917714294
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application/pdf
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv mluisa.alvim@gmail.com
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