Analysis of 17 STR data on 5362 southern Portuguese individuals-an update on reference database
Autor(a) principal: | |
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Data de Publicação: | 2016 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10400.26/36851 https://doi.org/10.1016/j.fsigen.2015.11.007 |
Resumo: | The main objective of this work consisted of the updating of allele frequencies and other relevant forensic parameters for the 17 autosomal STR loci provided by the combination of the two types of kits used routinely in our laboratory casework: AmpF/STR Identifiler(®) and the Powerplex(®) 16 Systems. This aim was of significant importance, given that the last study on these kits within the southern Portuguese population dates back to 2006, and, as a consequence, it was necessary to correct the deviation caused by population evolution over the last ten years so that they might be better applied to our forensic casework. For this reason genetic data from 5362 unrelated Caucasian Portuguese individuals from the south of Portugal who were involved in paternity testing casework from 2005 to 2014 was used. Of all the markers, TPOX proved to be the least polymorphic, and Penta E the most. Secondly, this up-to-date southern Portuguese population was compared not only with the northern and central Portuguese populations, but also with that of southern Portugal in 2006, along with populations from Spain, Italy, Greece, Romania, Morocco, Angola and Korea in order to infer information about the relatedness of these respective populations, and the variation of the southern Portuguese population over time. |
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Analysis of 17 STR data on 5362 southern Portuguese individuals-an update on reference databaseDatabases, GeneticForensic GeneticsGene FrequencyGenetic VariationGenetics, PopulationHumansPhylogenyPolymerase Chain ReactionPortugalReference ValuesMicrosatellite RepeatsThe main objective of this work consisted of the updating of allele frequencies and other relevant forensic parameters for the 17 autosomal STR loci provided by the combination of the two types of kits used routinely in our laboratory casework: AmpF/STR Identifiler(®) and the Powerplex(®) 16 Systems. This aim was of significant importance, given that the last study on these kits within the southern Portuguese population dates back to 2006, and, as a consequence, it was necessary to correct the deviation caused by population evolution over the last ten years so that they might be better applied to our forensic casework. For this reason genetic data from 5362 unrelated Caucasian Portuguese individuals from the south of Portugal who were involved in paternity testing casework from 2005 to 2014 was used. Of all the markers, TPOX proved to be the least polymorphic, and Penta E the most. Secondly, this up-to-date southern Portuguese population was compared not only with the northern and central Portuguese populations, but also with that of southern Portugal in 2006, along with populations from Spain, Italy, Greece, Romania, Morocco, Angola and Korea in order to infer information about the relatedness of these respective populations, and the variation of the southern Portuguese population over time.info:eu-repo/semantics/acceptedVersionElsevier2021-06-22T09:02:40Z2021-06-222016-03-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/10400.26/36851http://hdl.handle.net/10400.26/36851https://doi.org/10.1016/j.fsigen.2015.11.007engCabezas Silva, R., Ribeiro, T., Lucas, I., Porto, M. J., Costa Santos, J., & Dario, P. (2016). Analysis of 17 STR data on 5362 southern Portuguese individuals-an update on reference database. Forensic science international. Genetics, 21, e10–e12.1878-0326https://www.sciencedirect.com/science/article/pii/S1872497315300934http://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccessCabezas Silva, RaquelRibeiro, TeresaLucas, IsabelPorto, Maria JoãoCosta Santos, JorgeDario, Pauloreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-02-03T04:21:44Zoai:comum.rcaap.pt:10400.26/36851Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T02:07:40.889914Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Analysis of 17 STR data on 5362 southern Portuguese individuals-an update on reference database |
title |
Analysis of 17 STR data on 5362 southern Portuguese individuals-an update on reference database |
spellingShingle |
Analysis of 17 STR data on 5362 southern Portuguese individuals-an update on reference database Cabezas Silva, Raquel Databases, Genetic Forensic Genetics Gene Frequency Genetic Variation Genetics, Population Humans Phylogeny Polymerase Chain Reaction Portugal Reference Values Microsatellite Repeats |
title_short |
Analysis of 17 STR data on 5362 southern Portuguese individuals-an update on reference database |
title_full |
Analysis of 17 STR data on 5362 southern Portuguese individuals-an update on reference database |
title_fullStr |
Analysis of 17 STR data on 5362 southern Portuguese individuals-an update on reference database |
title_full_unstemmed |
Analysis of 17 STR data on 5362 southern Portuguese individuals-an update on reference database |
title_sort |
Analysis of 17 STR data on 5362 southern Portuguese individuals-an update on reference database |
author |
Cabezas Silva, Raquel |
author_facet |
Cabezas Silva, Raquel Ribeiro, Teresa Lucas, Isabel Porto, Maria João Costa Santos, Jorge Dario, Paulo |
author_role |
author |
author2 |
Ribeiro, Teresa Lucas, Isabel Porto, Maria João Costa Santos, Jorge Dario, Paulo |
author2_role |
author author author author author |
dc.contributor.author.fl_str_mv |
Cabezas Silva, Raquel Ribeiro, Teresa Lucas, Isabel Porto, Maria João Costa Santos, Jorge Dario, Paulo |
dc.subject.por.fl_str_mv |
Databases, Genetic Forensic Genetics Gene Frequency Genetic Variation Genetics, Population Humans Phylogeny Polymerase Chain Reaction Portugal Reference Values Microsatellite Repeats |
topic |
Databases, Genetic Forensic Genetics Gene Frequency Genetic Variation Genetics, Population Humans Phylogeny Polymerase Chain Reaction Portugal Reference Values Microsatellite Repeats |
description |
The main objective of this work consisted of the updating of allele frequencies and other relevant forensic parameters for the 17 autosomal STR loci provided by the combination of the two types of kits used routinely in our laboratory casework: AmpF/STR Identifiler(®) and the Powerplex(®) 16 Systems. This aim was of significant importance, given that the last study on these kits within the southern Portuguese population dates back to 2006, and, as a consequence, it was necessary to correct the deviation caused by population evolution over the last ten years so that they might be better applied to our forensic casework. For this reason genetic data from 5362 unrelated Caucasian Portuguese individuals from the south of Portugal who were involved in paternity testing casework from 2005 to 2014 was used. Of all the markers, TPOX proved to be the least polymorphic, and Penta E the most. Secondly, this up-to-date southern Portuguese population was compared not only with the northern and central Portuguese populations, but also with that of southern Portugal in 2006, along with populations from Spain, Italy, Greece, Romania, Morocco, Angola and Korea in order to infer information about the relatedness of these respective populations, and the variation of the southern Portuguese population over time. |
publishDate |
2016 |
dc.date.none.fl_str_mv |
2016-03-01T00:00:00Z 2021-06-22T09:02:40Z 2021-06-22 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10400.26/36851 http://hdl.handle.net/10400.26/36851 https://doi.org/10.1016/j.fsigen.2015.11.007 |
url |
http://hdl.handle.net/10400.26/36851 https://doi.org/10.1016/j.fsigen.2015.11.007 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Cabezas Silva, R., Ribeiro, T., Lucas, I., Porto, M. J., Costa Santos, J., & Dario, P. (2016). Analysis of 17 STR data on 5362 southern Portuguese individuals-an update on reference database. Forensic science international. Genetics, 21, e10–e12. 1878-0326 https://www.sciencedirect.com/science/article/pii/S1872497315300934 |
dc.rights.driver.fl_str_mv |
http://creativecommons.org/licenses/by-nc-nd/4.0/ info:eu-repo/semantics/openAccess |
rights_invalid_str_mv |
http://creativecommons.org/licenses/by-nc-nd/4.0/ |
eu_rights_str_mv |
openAccess |
dc.publisher.none.fl_str_mv |
Elsevier |
publisher.none.fl_str_mv |
Elsevier |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
instname_str |
Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
repository.mail.fl_str_mv |
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1799137165119062016 |