Pancreas Rejection in the Artificial Intelligence Era
Autor(a) principal: | |
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Data de Publicação: | 2023 |
Outros Autores: | , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10362/158425 |
Resumo: | Introduction: Pancreas transplantation is currently the only treatment that can re-establish normal endocrine pancreatic function. Despite all efforts, pancreas allograft survival and rejection remain major clinical problems. The purpose of this study was to identify features that could signal patients at risk of pancreas allograft rejection. Methods: We collected 74 features from 79 patients who underwent simultaneous pancreas–kidney transplantation (SPK) and used two widely-applicable classification methods, the Naive Bayesian Classifier and Support Vector Machine, to build predictive models. We used the area under the receiver operating characteristic curve and classification accuracy to evaluate the predictive performance via leave-one-out cross-validation. Results: Rejection events were identified in 13 SPK patients (17.8%). In feature selection approach, it was possible to identify 10 features, namely: previous treatment for diabetes mellitus with long-term Insulin (U/I/day), type of dialysis (peritoneal dialysis, hemodialysis, or pre-emptive), de novo DSA, vPRA_Pre-Transplant (%), donor blood glucose, pancreas donor risk index (pDRI), recipient height, dialysis time (days), warm ischemia (minutes), recipient of intensive care (days). The results showed that the Naive Bayes and Support Vector Machine classifiers prediction performed very well, with an AUROC and classification accuracy of 0.97 and 0.87, respectively, in the first model and 0.96 and 0.94 in the second model. Conclusion: Our results indicated that it is feasible to develop successful classifiers for the prediction of graft rejection. The Naive Bayesian generated nomogram can be used for rejection probability prediction, thus supporting clinical decision making. |
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Pancreas Rejection in the Artificial Intelligence EraNew Tool for Signal Patients at Riskallograft rejectionallograft survivalartificial intelligencemachine learningpancreas transplantationpatient risk managementMedicine (miscellaneous)SDG 3 - Good Health and Well-beingIntroduction: Pancreas transplantation is currently the only treatment that can re-establish normal endocrine pancreatic function. Despite all efforts, pancreas allograft survival and rejection remain major clinical problems. The purpose of this study was to identify features that could signal patients at risk of pancreas allograft rejection. Methods: We collected 74 features from 79 patients who underwent simultaneous pancreas–kidney transplantation (SPK) and used two widely-applicable classification methods, the Naive Bayesian Classifier and Support Vector Machine, to build predictive models. We used the area under the receiver operating characteristic curve and classification accuracy to evaluate the predictive performance via leave-one-out cross-validation. Results: Rejection events were identified in 13 SPK patients (17.8%). In feature selection approach, it was possible to identify 10 features, namely: previous treatment for diabetes mellitus with long-term Insulin (U/I/day), type of dialysis (peritoneal dialysis, hemodialysis, or pre-emptive), de novo DSA, vPRA_Pre-Transplant (%), donor blood glucose, pancreas donor risk index (pDRI), recipient height, dialysis time (days), warm ischemia (minutes), recipient of intensive care (days). The results showed that the Naive Bayes and Support Vector Machine classifiers prediction performed very well, with an AUROC and classification accuracy of 0.97 and 0.87, respectively, in the first model and 0.96 and 0.94 in the second model. Conclusion: Our results indicated that it is feasible to develop successful classifiers for the prediction of graft rejection. The Naive Bayesian generated nomogram can be used for rejection probability prediction, thus supporting clinical decision making.NOVA Medical School|Faculdade de Ciências Médicas (NMS|FCM)iNOVA4Health - pólo NMSRUNVigia, EmanuelRamalhete, LuísRibeiro, RitaBarros, InêsChumbinho, BeatrizFilipe, EditePena, AnaBicho, LuísNobre, AnaCarrelha, SofiaSobral, MafaldaLamelas, JorgeCoelho, João SantosFerreira, AníbalMarques, Hugo Pinto2023-09-28T22:19:36Z2023-072023-07-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10362/158425eng2075-4426PURE: 70559091https://doi.org/10.3390/jpm13071071info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-03-11T05:40:48Zoai:run.unl.pt:10362/158425Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T03:57:07.842888Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Pancreas Rejection in the Artificial Intelligence Era New Tool for Signal Patients at Risk |
title |
Pancreas Rejection in the Artificial Intelligence Era |
spellingShingle |
Pancreas Rejection in the Artificial Intelligence Era Vigia, Emanuel allograft rejection allograft survival artificial intelligence machine learning pancreas transplantation patient risk management Medicine (miscellaneous) SDG 3 - Good Health and Well-being |
title_short |
Pancreas Rejection in the Artificial Intelligence Era |
title_full |
Pancreas Rejection in the Artificial Intelligence Era |
title_fullStr |
Pancreas Rejection in the Artificial Intelligence Era |
title_full_unstemmed |
Pancreas Rejection in the Artificial Intelligence Era |
title_sort |
Pancreas Rejection in the Artificial Intelligence Era |
author |
Vigia, Emanuel |
author_facet |
Vigia, Emanuel Ramalhete, Luís Ribeiro, Rita Barros, Inês Chumbinho, Beatriz Filipe, Edite Pena, Ana Bicho, Luís Nobre, Ana Carrelha, Sofia Sobral, Mafalda Lamelas, Jorge Coelho, João Santos Ferreira, Aníbal Marques, Hugo Pinto |
author_role |
author |
author2 |
Ramalhete, Luís Ribeiro, Rita Barros, Inês Chumbinho, Beatriz Filipe, Edite Pena, Ana Bicho, Luís Nobre, Ana Carrelha, Sofia Sobral, Mafalda Lamelas, Jorge Coelho, João Santos Ferreira, Aníbal Marques, Hugo Pinto |
author2_role |
author author author author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
NOVA Medical School|Faculdade de Ciências Médicas (NMS|FCM) iNOVA4Health - pólo NMS RUN |
dc.contributor.author.fl_str_mv |
Vigia, Emanuel Ramalhete, Luís Ribeiro, Rita Barros, Inês Chumbinho, Beatriz Filipe, Edite Pena, Ana Bicho, Luís Nobre, Ana Carrelha, Sofia Sobral, Mafalda Lamelas, Jorge Coelho, João Santos Ferreira, Aníbal Marques, Hugo Pinto |
dc.subject.por.fl_str_mv |
allograft rejection allograft survival artificial intelligence machine learning pancreas transplantation patient risk management Medicine (miscellaneous) SDG 3 - Good Health and Well-being |
topic |
allograft rejection allograft survival artificial intelligence machine learning pancreas transplantation patient risk management Medicine (miscellaneous) SDG 3 - Good Health and Well-being |
description |
Introduction: Pancreas transplantation is currently the only treatment that can re-establish normal endocrine pancreatic function. Despite all efforts, pancreas allograft survival and rejection remain major clinical problems. The purpose of this study was to identify features that could signal patients at risk of pancreas allograft rejection. Methods: We collected 74 features from 79 patients who underwent simultaneous pancreas–kidney transplantation (SPK) and used two widely-applicable classification methods, the Naive Bayesian Classifier and Support Vector Machine, to build predictive models. We used the area under the receiver operating characteristic curve and classification accuracy to evaluate the predictive performance via leave-one-out cross-validation. Results: Rejection events were identified in 13 SPK patients (17.8%). In feature selection approach, it was possible to identify 10 features, namely: previous treatment for diabetes mellitus with long-term Insulin (U/I/day), type of dialysis (peritoneal dialysis, hemodialysis, or pre-emptive), de novo DSA, vPRA_Pre-Transplant (%), donor blood glucose, pancreas donor risk index (pDRI), recipient height, dialysis time (days), warm ischemia (minutes), recipient of intensive care (days). The results showed that the Naive Bayes and Support Vector Machine classifiers prediction performed very well, with an AUROC and classification accuracy of 0.97 and 0.87, respectively, in the first model and 0.96 and 0.94 in the second model. Conclusion: Our results indicated that it is feasible to develop successful classifiers for the prediction of graft rejection. The Naive Bayesian generated nomogram can be used for rejection probability prediction, thus supporting clinical decision making. |
publishDate |
2023 |
dc.date.none.fl_str_mv |
2023-09-28T22:19:36Z 2023-07 2023-07-01T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10362/158425 |
url |
http://hdl.handle.net/10362/158425 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
2075-4426 PURE: 70559091 https://doi.org/10.3390/jpm13071071 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
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application/pdf |
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Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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RCAAP |
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RCAAP |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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