Optimization of the molecular diagnosis of the acute hepatitis E virus infection

Detalhes bibliográficos
Autor(a) principal: Lopez-Lopez, P
Data de Publicação: 2023
Outros Autores: Frias, M, Perez-Jimenez, AB, Freyre-Carrillo, C, Pineda, JA, Aguilera, A, Fuentes, A, Alados, JC, Reina, G, Ramirez-Arellano, E, Viciana, I, Mesquita, J, Caballero-Gomez, J, Rivero-Juarez, A, Rivero, A
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: https://hdl.handle.net/10216/154110
Resumo: To evaluate the diagnostic value of the combination of two broad-range PCR assays targeting two different and conserved regions of the viral genome for the diagnosis of acute Hepatitis E virus (HEV) infection. Patients with acute hepatitis were prospectively recruited. In all, HEV-IgM antibodies were tested together with evaluation of HEV viraemia by two PCR assays (ORF3 and ORF1). The number of individuals exhibiting negative IgM antibody results but carrying viral RNA was calculated by each PCR assay. Four-hundred and seventy individuals were included, of whom 145 (30.8%) were diagnosed as having acute HEV. Of them, 122 (84.1%) exhibited HEV-IgM antibodies, and 81 (55.8%) had detectable viral RNA for at least one PCR. Using the ORF3 molecular assay, 70 (48.3%) individuals were identified with HEV infection. When the ORF1 molecular assay was applied, 49 (33.8%) individuals were identified. The ORF3 assay detected viral RNA in 32 patients not detected by the ORF1 assay. In contrast, the ORF1 assay could amplify viral RNA in 11 patients who were not detected by the ORF3 assay. The parallel use of two broad-range PCR assays significantly increased the performance of the molecular diagnosis of HEV.
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spelling Optimization of the molecular diagnosis of the acute hepatitis E virus infectionTo evaluate the diagnostic value of the combination of two broad-range PCR assays targeting two different and conserved regions of the viral genome for the diagnosis of acute Hepatitis E virus (HEV) infection. Patients with acute hepatitis were prospectively recruited. In all, HEV-IgM antibodies were tested together with evaluation of HEV viraemia by two PCR assays (ORF3 and ORF1). The number of individuals exhibiting negative IgM antibody results but carrying viral RNA was calculated by each PCR assay. Four-hundred and seventy individuals were included, of whom 145 (30.8%) were diagnosed as having acute HEV. Of them, 122 (84.1%) exhibited HEV-IgM antibodies, and 81 (55.8%) had detectable viral RNA for at least one PCR. Using the ORF3 molecular assay, 70 (48.3%) individuals were identified with HEV infection. When the ORF1 molecular assay was applied, 49 (33.8%) individuals were identified. The ORF3 assay detected viral RNA in 32 patients not detected by the ORF1 assay. In contrast, the ORF1 assay could amplify viral RNA in 11 patients who were not detected by the ORF3 assay. The parallel use of two broad-range PCR assays significantly increased the performance of the molecular diagnosis of HEV.Wiley Open Access20232023-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttps://hdl.handle.net/10216/154110eng1751-791510.1111/1751-7915.14247Lopez-Lopez, PFrias, MPerez-Jimenez, ABFreyre-Carrillo, CPineda, JAAguilera, AFuentes, AAlados, JCReina, GRamirez-Arellano, EViciana, IMesquita, JCaballero-Gomez, JRivero-Juarez, ARivero, Ainfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-11-29T13:34:47Zoai:repositorio-aberto.up.pt:10216/154110Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T23:43:03.649492Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Optimization of the molecular diagnosis of the acute hepatitis E virus infection
title Optimization of the molecular diagnosis of the acute hepatitis E virus infection
spellingShingle Optimization of the molecular diagnosis of the acute hepatitis E virus infection
Lopez-Lopez, P
title_short Optimization of the molecular diagnosis of the acute hepatitis E virus infection
title_full Optimization of the molecular diagnosis of the acute hepatitis E virus infection
title_fullStr Optimization of the molecular diagnosis of the acute hepatitis E virus infection
title_full_unstemmed Optimization of the molecular diagnosis of the acute hepatitis E virus infection
title_sort Optimization of the molecular diagnosis of the acute hepatitis E virus infection
author Lopez-Lopez, P
author_facet Lopez-Lopez, P
Frias, M
Perez-Jimenez, AB
Freyre-Carrillo, C
Pineda, JA
Aguilera, A
Fuentes, A
Alados, JC
Reina, G
Ramirez-Arellano, E
Viciana, I
Mesquita, J
Caballero-Gomez, J
Rivero-Juarez, A
Rivero, A
author_role author
author2 Frias, M
Perez-Jimenez, AB
Freyre-Carrillo, C
Pineda, JA
Aguilera, A
Fuentes, A
Alados, JC
Reina, G
Ramirez-Arellano, E
Viciana, I
Mesquita, J
Caballero-Gomez, J
Rivero-Juarez, A
Rivero, A
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Lopez-Lopez, P
Frias, M
Perez-Jimenez, AB
Freyre-Carrillo, C
Pineda, JA
Aguilera, A
Fuentes, A
Alados, JC
Reina, G
Ramirez-Arellano, E
Viciana, I
Mesquita, J
Caballero-Gomez, J
Rivero-Juarez, A
Rivero, A
description To evaluate the diagnostic value of the combination of two broad-range PCR assays targeting two different and conserved regions of the viral genome for the diagnosis of acute Hepatitis E virus (HEV) infection. Patients with acute hepatitis were prospectively recruited. In all, HEV-IgM antibodies were tested together with evaluation of HEV viraemia by two PCR assays (ORF3 and ORF1). The number of individuals exhibiting negative IgM antibody results but carrying viral RNA was calculated by each PCR assay. Four-hundred and seventy individuals were included, of whom 145 (30.8%) were diagnosed as having acute HEV. Of them, 122 (84.1%) exhibited HEV-IgM antibodies, and 81 (55.8%) had detectable viral RNA for at least one PCR. Using the ORF3 molecular assay, 70 (48.3%) individuals were identified with HEV infection. When the ORF1 molecular assay was applied, 49 (33.8%) individuals were identified. The ORF3 assay detected viral RNA in 32 patients not detected by the ORF1 assay. In contrast, the ORF1 assay could amplify viral RNA in 11 patients who were not detected by the ORF3 assay. The parallel use of two broad-range PCR assays significantly increased the performance of the molecular diagnosis of HEV.
publishDate 2023
dc.date.none.fl_str_mv 2023
2023-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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status_str publishedVersion
dc.identifier.uri.fl_str_mv https://hdl.handle.net/10216/154110
url https://hdl.handle.net/10216/154110
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 1751-7915
10.1111/1751-7915.14247
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.publisher.none.fl_str_mv Wiley Open Access
publisher.none.fl_str_mv Wiley Open Access
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