Seasonal proteome variation in intertidal shrimps under a natural setting: connecting molecular networks with environmental fluctuations

Detalhes bibliográficos
Autor(a) principal: Madeira, D.
Data de Publicação: 2020
Outros Autores: Araújo, J. E., Madeira, C., Mendonça, V., Vitorino, R., Vinagre, C., Diniz, M. S.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10773/37469
Resumo: The ability of intertidal organisms to maintain their performance via molecular and physiological adjustments under low tide, seasonal fluctuations and extreme events ultimately determines population viability. Analyzing this capacity in the wild is extremely relevant since intertidal communities are under increased climate variability owing to global changes. We addressed the seasonal proteome signatures of a key intertidal species, the shrimp Palaemon elegans, in a natural setting. Shrimps were collected during spring and summer seasons at low tides and were euthanized in situ. Environmental variability was also assessed using hand-held devices and data loggers. Muscle samples were taken for 2D gel electrophoresis and protein identification through mass spectrometry. Proteome data revealed that 55 proteins (10.6% of the proteome) significantly changed between spring and summer collected shrimps, 24 of which were identified. These proteins were mostly involved in cytoskeleton remodelling, energy metabolism and transcription regulation. Overall, shrimps modulate gene expression leading to metabolic and structural adjustments related to seasonal differences in the wild (i.e. abiotic variation and possibly intrinsic cycles of reproduction and growth). This potentially promotes performance and fitness as suggested by the higher condition index in summer-collected shrimps. However, inter-individual variation (% coefficient of variation) in protein levels was quite low (min-max ranges were 0.6-8.3% in spring and 1.2-4.8% in summer), possibly suggesting reduced genetic diversity or physiological canalization. Protein plasticity is relevant to cope with present and upcoming environmental variation related to anthropogenic forcing (e.g. global change, pollution) but low inter-individual variation may limit evolutionary potential of shrimp populations.
id RCAP_1c8f3fb292e72021ac6eefe0f21c0c9b
oai_identifier_str oai:ria.ua.pt:10773/37469
network_acronym_str RCAP
network_name_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository_id_str 7160
spelling Seasonal proteome variation in intertidal shrimps under a natural setting: connecting molecular networks with environmental fluctuationsIn situIntertidalPhenotypic plasticityProteomicsSeasonPalaemon elegansThe ability of intertidal organisms to maintain their performance via molecular and physiological adjustments under low tide, seasonal fluctuations and extreme events ultimately determines population viability. Analyzing this capacity in the wild is extremely relevant since intertidal communities are under increased climate variability owing to global changes. We addressed the seasonal proteome signatures of a key intertidal species, the shrimp Palaemon elegans, in a natural setting. Shrimps were collected during spring and summer seasons at low tides and were euthanized in situ. Environmental variability was also assessed using hand-held devices and data loggers. Muscle samples were taken for 2D gel electrophoresis and protein identification through mass spectrometry. Proteome data revealed that 55 proteins (10.6% of the proteome) significantly changed between spring and summer collected shrimps, 24 of which were identified. These proteins were mostly involved in cytoskeleton remodelling, energy metabolism and transcription regulation. Overall, shrimps modulate gene expression leading to metabolic and structural adjustments related to seasonal differences in the wild (i.e. abiotic variation and possibly intrinsic cycles of reproduction and growth). This potentially promotes performance and fitness as suggested by the higher condition index in summer-collected shrimps. However, inter-individual variation (% coefficient of variation) in protein levels was quite low (min-max ranges were 0.6-8.3% in spring and 1.2-4.8% in summer), possibly suggesting reduced genetic diversity or physiological canalization. Protein plasticity is relevant to cope with present and upcoming environmental variation related to anthropogenic forcing (e.g. global change, pollution) but low inter-individual variation may limit evolutionary potential of shrimp populations.Elsevier2023-05-02T15:09:46Z2020-02-10T00:00:00Z2020-02-10info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10773/37469eng0048-969710.1016/j.scitotenv.2019.134957Madeira, D.Araújo, J. E.Madeira, C.Mendonça, V.Vitorino, R.Vinagre, C.Diniz, M. S.info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-02-22T12:12:24Zoai:ria.ua.pt:10773/37469Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T03:08:05.596661Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Seasonal proteome variation in intertidal shrimps under a natural setting: connecting molecular networks with environmental fluctuations
title Seasonal proteome variation in intertidal shrimps under a natural setting: connecting molecular networks with environmental fluctuations
spellingShingle Seasonal proteome variation in intertidal shrimps under a natural setting: connecting molecular networks with environmental fluctuations
Madeira, D.
In situ
Intertidal
Phenotypic plasticity
Proteomics
Season
Palaemon elegans
title_short Seasonal proteome variation in intertidal shrimps under a natural setting: connecting molecular networks with environmental fluctuations
title_full Seasonal proteome variation in intertidal shrimps under a natural setting: connecting molecular networks with environmental fluctuations
title_fullStr Seasonal proteome variation in intertidal shrimps under a natural setting: connecting molecular networks with environmental fluctuations
title_full_unstemmed Seasonal proteome variation in intertidal shrimps under a natural setting: connecting molecular networks with environmental fluctuations
title_sort Seasonal proteome variation in intertidal shrimps under a natural setting: connecting molecular networks with environmental fluctuations
author Madeira, D.
author_facet Madeira, D.
Araújo, J. E.
Madeira, C.
Mendonça, V.
Vitorino, R.
Vinagre, C.
Diniz, M. S.
author_role author
author2 Araújo, J. E.
Madeira, C.
Mendonça, V.
Vitorino, R.
Vinagre, C.
Diniz, M. S.
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Madeira, D.
Araújo, J. E.
Madeira, C.
Mendonça, V.
Vitorino, R.
Vinagre, C.
Diniz, M. S.
dc.subject.por.fl_str_mv In situ
Intertidal
Phenotypic plasticity
Proteomics
Season
Palaemon elegans
topic In situ
Intertidal
Phenotypic plasticity
Proteomics
Season
Palaemon elegans
description The ability of intertidal organisms to maintain their performance via molecular and physiological adjustments under low tide, seasonal fluctuations and extreme events ultimately determines population viability. Analyzing this capacity in the wild is extremely relevant since intertidal communities are under increased climate variability owing to global changes. We addressed the seasonal proteome signatures of a key intertidal species, the shrimp Palaemon elegans, in a natural setting. Shrimps were collected during spring and summer seasons at low tides and were euthanized in situ. Environmental variability was also assessed using hand-held devices and data loggers. Muscle samples were taken for 2D gel electrophoresis and protein identification through mass spectrometry. Proteome data revealed that 55 proteins (10.6% of the proteome) significantly changed between spring and summer collected shrimps, 24 of which were identified. These proteins were mostly involved in cytoskeleton remodelling, energy metabolism and transcription regulation. Overall, shrimps modulate gene expression leading to metabolic and structural adjustments related to seasonal differences in the wild (i.e. abiotic variation and possibly intrinsic cycles of reproduction and growth). This potentially promotes performance and fitness as suggested by the higher condition index in summer-collected shrimps. However, inter-individual variation (% coefficient of variation) in protein levels was quite low (min-max ranges were 0.6-8.3% in spring and 1.2-4.8% in summer), possibly suggesting reduced genetic diversity or physiological canalization. Protein plasticity is relevant to cope with present and upcoming environmental variation related to anthropogenic forcing (e.g. global change, pollution) but low inter-individual variation may limit evolutionary potential of shrimp populations.
publishDate 2020
dc.date.none.fl_str_mv 2020-02-10T00:00:00Z
2020-02-10
2023-05-02T15:09:46Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10773/37469
url http://hdl.handle.net/10773/37469
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 0048-9697
10.1016/j.scitotenv.2019.134957
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Elsevier
publisher.none.fl_str_mv Elsevier
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv
_version_ 1799137734619561984