Genetic and Genomic Tools to Asssist Sugar Beet Improvement: The Value of the Crop Wild Relatives

Detalhes bibliográficos
Autor(a) principal: Monteiro, Filipa
Data de Publicação: 2018
Outros Autores: Frese, Lothar, Castro, Silvia, Duarte, Maria C., Paulo, Octávio S., Loureiro, João, Romeiras, Maria M.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10316/107643
https://doi.org/10.3389/fpls.2018.00074
Resumo: Sugar beet (Beta vulgaris L. ssp. vulgaris) is one of the most important European crops for both food and sugar production. Crop improvement has been developed to enhance productivity, sugar content or other breeder's desirable traits. The introgression of traits from Crop Wild Relatives (CWR) has been done essentially for lessening biotic stresses constraints, namely using Beta and Patellifolia species which exhibit disease resistance characteristics. Several studies have addressed crop-to-wild gene flow, yet, for breeding programs genetic variability associated with agronomically important traits remains unexplored regarding abiotic factors. To accomplish such association from phenotype-to-genotype, screening for wild relatives occurring in habitats where selective pressures are in play (i.e., populations in salt marshes for salinity tolerance; populations subjected to pathogen attacks and likely evolved resistance to pathogens) are the most appropriate streamline to identify causal genetic information. By selecting sugar beet CWR species based on genomic tools, rather than random variations, is a promising but still seldom explored route toward the development of improved crops. In this perspective, a viable streamline for sugar beet improvement is proposed through the use of different genomic tools by recurring to sugar beet CWRs and focusing on agronomic traits associated with abiotic stress tolerance. Overall, identification of genomic and epigenomic landscapes associated to adaptive ecotypes, along with the cytogenetic and habitat characterization of sugar beet CWR, will enable to identify potential hotspots for agrobiodiversity of sugar beet crop improvement toward abiotic stress tolerance.
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spelling Genetic and Genomic Tools to Asssist Sugar Beet Improvement: The Value of the Crop Wild RelativesBetaPatellifoliacrop wild relativescrop breeding poolnext-generation sequencingSugar beet (Beta vulgaris L. ssp. vulgaris) is one of the most important European crops for both food and sugar production. Crop improvement has been developed to enhance productivity, sugar content or other breeder's desirable traits. The introgression of traits from Crop Wild Relatives (CWR) has been done essentially for lessening biotic stresses constraints, namely using Beta and Patellifolia species which exhibit disease resistance characteristics. Several studies have addressed crop-to-wild gene flow, yet, for breeding programs genetic variability associated with agronomically important traits remains unexplored regarding abiotic factors. To accomplish such association from phenotype-to-genotype, screening for wild relatives occurring in habitats where selective pressures are in play (i.e., populations in salt marshes for salinity tolerance; populations subjected to pathogen attacks and likely evolved resistance to pathogens) are the most appropriate streamline to identify causal genetic information. By selecting sugar beet CWR species based on genomic tools, rather than random variations, is a promising but still seldom explored route toward the development of improved crops. In this perspective, a viable streamline for sugar beet improvement is proposed through the use of different genomic tools by recurring to sugar beet CWRs and focusing on agronomic traits associated with abiotic stress tolerance. Overall, identification of genomic and epigenomic landscapes associated to adaptive ecotypes, along with the cytogenetic and habitat characterization of sugar beet CWR, will enable to identify potential hotspots for agrobiodiversity of sugar beet crop improvement toward abiotic stress tolerance.Frontiers Media S.A.2018info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/10316/107643http://hdl.handle.net/10316/107643https://doi.org/10.3389/fpls.2018.00074eng1664-462XMonteiro, FilipaFrese, LotharCastro, SilviaDuarte, Maria C.Paulo, Octávio S.Loureiro, JoãoRomeiras, Maria M.info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-25T12:12:04Zoai:estudogeral.uc.pt:10316/107643Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T21:23:58.412261Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Genetic and Genomic Tools to Asssist Sugar Beet Improvement: The Value of the Crop Wild Relatives
title Genetic and Genomic Tools to Asssist Sugar Beet Improvement: The Value of the Crop Wild Relatives
spellingShingle Genetic and Genomic Tools to Asssist Sugar Beet Improvement: The Value of the Crop Wild Relatives
Monteiro, Filipa
Beta
Patellifolia
crop wild relatives
crop breeding pool
next-generation sequencing
title_short Genetic and Genomic Tools to Asssist Sugar Beet Improvement: The Value of the Crop Wild Relatives
title_full Genetic and Genomic Tools to Asssist Sugar Beet Improvement: The Value of the Crop Wild Relatives
title_fullStr Genetic and Genomic Tools to Asssist Sugar Beet Improvement: The Value of the Crop Wild Relatives
title_full_unstemmed Genetic and Genomic Tools to Asssist Sugar Beet Improvement: The Value of the Crop Wild Relatives
title_sort Genetic and Genomic Tools to Asssist Sugar Beet Improvement: The Value of the Crop Wild Relatives
author Monteiro, Filipa
author_facet Monteiro, Filipa
Frese, Lothar
Castro, Silvia
Duarte, Maria C.
Paulo, Octávio S.
Loureiro, João
Romeiras, Maria M.
author_role author
author2 Frese, Lothar
Castro, Silvia
Duarte, Maria C.
Paulo, Octávio S.
Loureiro, João
Romeiras, Maria M.
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Monteiro, Filipa
Frese, Lothar
Castro, Silvia
Duarte, Maria C.
Paulo, Octávio S.
Loureiro, João
Romeiras, Maria M.
dc.subject.por.fl_str_mv Beta
Patellifolia
crop wild relatives
crop breeding pool
next-generation sequencing
topic Beta
Patellifolia
crop wild relatives
crop breeding pool
next-generation sequencing
description Sugar beet (Beta vulgaris L. ssp. vulgaris) is one of the most important European crops for both food and sugar production. Crop improvement has been developed to enhance productivity, sugar content or other breeder's desirable traits. The introgression of traits from Crop Wild Relatives (CWR) has been done essentially for lessening biotic stresses constraints, namely using Beta and Patellifolia species which exhibit disease resistance characteristics. Several studies have addressed crop-to-wild gene flow, yet, for breeding programs genetic variability associated with agronomically important traits remains unexplored regarding abiotic factors. To accomplish such association from phenotype-to-genotype, screening for wild relatives occurring in habitats where selective pressures are in play (i.e., populations in salt marshes for salinity tolerance; populations subjected to pathogen attacks and likely evolved resistance to pathogens) are the most appropriate streamline to identify causal genetic information. By selecting sugar beet CWR species based on genomic tools, rather than random variations, is a promising but still seldom explored route toward the development of improved crops. In this perspective, a viable streamline for sugar beet improvement is proposed through the use of different genomic tools by recurring to sugar beet CWRs and focusing on agronomic traits associated with abiotic stress tolerance. Overall, identification of genomic and epigenomic landscapes associated to adaptive ecotypes, along with the cytogenetic and habitat characterization of sugar beet CWR, will enable to identify potential hotspots for agrobiodiversity of sugar beet crop improvement toward abiotic stress tolerance.
publishDate 2018
dc.date.none.fl_str_mv 2018
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10316/107643
http://hdl.handle.net/10316/107643
https://doi.org/10.3389/fpls.2018.00074
url http://hdl.handle.net/10316/107643
https://doi.org/10.3389/fpls.2018.00074
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 1664-462X
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.publisher.none.fl_str_mv Frontiers Media S.A.
publisher.none.fl_str_mv Frontiers Media S.A.
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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