Improvement of STEAP 1 Biosynthesis from Pichia pastoris X33 cells under an optimized feeding strategy

Detalhes bibliográficos
Autor(a) principal: Duarte, Diana Rute Tavares
Data de Publicação: 2017
Tipo de documento: Dissertação
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.6/6632
Resumo: Prostate cancer (PCa) is the most common type of cancer in aged men. Actually, the main problem arises from the fact that both PCa diagnosis and therapy are still invasive and limited in advanced stages of this disease. Thus, it is necessary to identify, study and characterize specific proteins whose expression correlates with these pathologies. Concerning this, it has been suggested that the Six-transmembrane epithelial antigen of the prostate 1 (STEAP1) protein as a good biomarker and/or immunotherapeutic target for PCa. It is located in the plasma membrane of epithelial cells, in both tight and gap junctions. STEAP1 is composed of six transmembrane domains, connected by three extracellular and two intracellular loops. Therefore, it has been suggested that this protein plays an important role in intracellular communication between cancer cells, contributing to the cancer process and tumor invasiveness. The characterization of STEAP1 structure and function might allow the development of specific inhibitors, envisaging a decrease of its oncogenic role. However, the techniques used for protein structural and functional characterization demand for high quantities of the target protein, which may be achieved through the recombinant DNA technology. Therefore, the aim of this work was to improve STEAP1 biosynthesis from mini-bioreactor Pichia pastoris X33 methanol induced cultures. This was achieved through the study of different glycerol and methanol feeding profiles during the fed-batch phases. Briefly, the medium supplementation with Proline 1M in a gradient glycerol and constant methanol feed, leads to high quantities of STEAP1 (increase for the double). An exponential glycerol and constant methanol feed produces fewer amounts of the protein but in the correct molecular weight (~35kDa). The influence of the fermentation conditions on STEAP1 molecular weight and N-glycosylation was studied using the enzyme PNGase F. The results showed that a constant glycerol feed seems to produce STEAP1 with N-glycosylation. However, the dimers produced in the gradient glycerol feed are not due N-glycosylation process. Two-dimensional electrophoresis proves this, and it was demonstrated that they correspond to different N-glycosylation patterns. Overall, it was successfully optimized a new strategy for recombinant STEAP1 biosynthesis, through the study of different feeding profiles. Future work encompassing will be developed an alternative strategy to perform the purification on the target protein.
id RCAP_25195c439b3413a9528d6fe07067dc8c
oai_identifier_str oai:ubibliorum.ubi.pt:10400.6/6632
network_acronym_str RCAP
network_name_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository_id_str 7160
spelling Improvement of STEAP 1 Biosynthesis from Pichia pastoris X33 cells under an optimized feeding strategyBiosynthesisPichia PastorisProstate CancerRecombinant ProteinsSteap1Domínio/Área Científica::Engenharia e Tecnologia:: Outras Engenharias e TecnologiasProstate cancer (PCa) is the most common type of cancer in aged men. Actually, the main problem arises from the fact that both PCa diagnosis and therapy are still invasive and limited in advanced stages of this disease. Thus, it is necessary to identify, study and characterize specific proteins whose expression correlates with these pathologies. Concerning this, it has been suggested that the Six-transmembrane epithelial antigen of the prostate 1 (STEAP1) protein as a good biomarker and/or immunotherapeutic target for PCa. It is located in the plasma membrane of epithelial cells, in both tight and gap junctions. STEAP1 is composed of six transmembrane domains, connected by three extracellular and two intracellular loops. Therefore, it has been suggested that this protein plays an important role in intracellular communication between cancer cells, contributing to the cancer process and tumor invasiveness. The characterization of STEAP1 structure and function might allow the development of specific inhibitors, envisaging a decrease of its oncogenic role. However, the techniques used for protein structural and functional characterization demand for high quantities of the target protein, which may be achieved through the recombinant DNA technology. Therefore, the aim of this work was to improve STEAP1 biosynthesis from mini-bioreactor Pichia pastoris X33 methanol induced cultures. This was achieved through the study of different glycerol and methanol feeding profiles during the fed-batch phases. Briefly, the medium supplementation with Proline 1M in a gradient glycerol and constant methanol feed, leads to high quantities of STEAP1 (increase for the double). An exponential glycerol and constant methanol feed produces fewer amounts of the protein but in the correct molecular weight (~35kDa). The influence of the fermentation conditions on STEAP1 molecular weight and N-glycosylation was studied using the enzyme PNGase F. The results showed that a constant glycerol feed seems to produce STEAP1 with N-glycosylation. However, the dimers produced in the gradient glycerol feed are not due N-glycosylation process. Two-dimensional electrophoresis proves this, and it was demonstrated that they correspond to different N-glycosylation patterns. Overall, it was successfully optimized a new strategy for recombinant STEAP1 biosynthesis, through the study of different feeding profiles. Future work encompassing will be developed an alternative strategy to perform the purification on the target protein.O cancro da próstata é uma das patologias com maior incidência em todo o mundo. Atualmente, os meios de diagnóstico e terapêuticos existentes são invasivos e apresentam uma eficácia limitada sobretudo em estágios mais avançados da doença. Desta forma, torna-se necessário o estudo de proteínas específicas cuja expressão esteja relacionada com o seu desenvolvimento e progressão. Diversos estudos têm sugerido a proteína Six-transmembrane Epithelial Antigen of the Prostate 1 (STEAP1) como um possível biomarcador e/ou alvo imunoterapêutico para o cancro da próstata. A STEAP1 é constituída por 6 domínios transmembranares e encontra-se presente na membrana plasmática das células epiteliais, nomeadamente nas junções que promovem a comunicação célula-célula. Alguns estudos suportam a hipótese que a STEAP 1 assume um papel preponderante na comunicação entre células tumorais, estando desta forma envolvida na progressão do cancro. No entanto, estudos complementares são ainda necessários para resolver a sua estrutura tridimensional de forma a melhor compreender as suas funções na carcinogénese assim como delinear novas estratégias terapêuticas. Deste modo, elevadas quantidades de STEAP1 são requeridas a partir de tecnologias emergentes de DNA recombinante. Nestes domínios, a levedura Pichia pastoris tem-se revelado um hospedeiro adequado na expressão de proteínas recombinantes. Em particular, a sua capacidade para realizar modificações pós-tradução torna-a num sistema microbiano ideal para a produção recombinante de proteínas membranares. Assim, os principais objetivos do presente trabalho são: 1) Aumentar a escala de produção da proteína STEAP1 para bioreator em culturas de Pichia pastoris X33 testando diferentes feeds de glicerol e metanol; 2) Avaliar a adição de diferentes chaperones químicos que contribuam para a estabilização conformacional da STEAP1; 3) Estudar a influência dos diferentes feeds de glicerol em eventuais processos de N-glicosilação. Os resultados obtidos demonstraram que - através um feed por gradiente de glicerol e constante de metanol - houve um aumento da produção de STEAP1, para cerca do dobro, aquando a suplementação do meio com 1M de Prolina. Observa-se que na aplicação de um feed exponencial de glicerol e constante de metanol, a quantidade de STEAP1 produzida encontra-se no peso molecular correto (~35kDa), embora se tivesse verificado níveis de produção reduzidos. Adicionalmente, denotou-se através da digestão dos lisados com a enzima PNGase F que um feed constante de glicerol e metanol parece produzir STEAP1 com N-glicosilação. Como trabalho futuro serão desenvolvidas estratégias de purificação da proteína STEAP1.Passarinha, Luís António PaulinoBatista, Cláudio Jorge MaiauBibliorumDuarte, Diana Rute Tavares2018-12-14T11:43:35Z2017-10-32017-11-072017-11-07T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfhttp://hdl.handle.net/10400.6/6632TID:202028461enginfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-12-15T09:45:20Zoai:ubibliorum.ubi.pt:10400.6/6632Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T00:47:18.818825Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Improvement of STEAP 1 Biosynthesis from Pichia pastoris X33 cells under an optimized feeding strategy
title Improvement of STEAP 1 Biosynthesis from Pichia pastoris X33 cells under an optimized feeding strategy
spellingShingle Improvement of STEAP 1 Biosynthesis from Pichia pastoris X33 cells under an optimized feeding strategy
Duarte, Diana Rute Tavares
Biosynthesis
Pichia Pastoris
Prostate Cancer
Recombinant Proteins
Steap1
Domínio/Área Científica::Engenharia e Tecnologia:: Outras Engenharias e Tecnologias
title_short Improvement of STEAP 1 Biosynthesis from Pichia pastoris X33 cells under an optimized feeding strategy
title_full Improvement of STEAP 1 Biosynthesis from Pichia pastoris X33 cells under an optimized feeding strategy
title_fullStr Improvement of STEAP 1 Biosynthesis from Pichia pastoris X33 cells under an optimized feeding strategy
title_full_unstemmed Improvement of STEAP 1 Biosynthesis from Pichia pastoris X33 cells under an optimized feeding strategy
title_sort Improvement of STEAP 1 Biosynthesis from Pichia pastoris X33 cells under an optimized feeding strategy
author Duarte, Diana Rute Tavares
author_facet Duarte, Diana Rute Tavares
author_role author
dc.contributor.none.fl_str_mv Passarinha, Luís António Paulino
Batista, Cláudio Jorge Maia
uBibliorum
dc.contributor.author.fl_str_mv Duarte, Diana Rute Tavares
dc.subject.por.fl_str_mv Biosynthesis
Pichia Pastoris
Prostate Cancer
Recombinant Proteins
Steap1
Domínio/Área Científica::Engenharia e Tecnologia:: Outras Engenharias e Tecnologias
topic Biosynthesis
Pichia Pastoris
Prostate Cancer
Recombinant Proteins
Steap1
Domínio/Área Científica::Engenharia e Tecnologia:: Outras Engenharias e Tecnologias
description Prostate cancer (PCa) is the most common type of cancer in aged men. Actually, the main problem arises from the fact that both PCa diagnosis and therapy are still invasive and limited in advanced stages of this disease. Thus, it is necessary to identify, study and characterize specific proteins whose expression correlates with these pathologies. Concerning this, it has been suggested that the Six-transmembrane epithelial antigen of the prostate 1 (STEAP1) protein as a good biomarker and/or immunotherapeutic target for PCa. It is located in the plasma membrane of epithelial cells, in both tight and gap junctions. STEAP1 is composed of six transmembrane domains, connected by three extracellular and two intracellular loops. Therefore, it has been suggested that this protein plays an important role in intracellular communication between cancer cells, contributing to the cancer process and tumor invasiveness. The characterization of STEAP1 structure and function might allow the development of specific inhibitors, envisaging a decrease of its oncogenic role. However, the techniques used for protein structural and functional characterization demand for high quantities of the target protein, which may be achieved through the recombinant DNA technology. Therefore, the aim of this work was to improve STEAP1 biosynthesis from mini-bioreactor Pichia pastoris X33 methanol induced cultures. This was achieved through the study of different glycerol and methanol feeding profiles during the fed-batch phases. Briefly, the medium supplementation with Proline 1M in a gradient glycerol and constant methanol feed, leads to high quantities of STEAP1 (increase for the double). An exponential glycerol and constant methanol feed produces fewer amounts of the protein but in the correct molecular weight (~35kDa). The influence of the fermentation conditions on STEAP1 molecular weight and N-glycosylation was studied using the enzyme PNGase F. The results showed that a constant glycerol feed seems to produce STEAP1 with N-glycosylation. However, the dimers produced in the gradient glycerol feed are not due N-glycosylation process. Two-dimensional electrophoresis proves this, and it was demonstrated that they correspond to different N-glycosylation patterns. Overall, it was successfully optimized a new strategy for recombinant STEAP1 biosynthesis, through the study of different feeding profiles. Future work encompassing will be developed an alternative strategy to perform the purification on the target protein.
publishDate 2017
dc.date.none.fl_str_mv 2017-10-3
2017-11-07
2017-11-07T00:00:00Z
2018-12-14T11:43:35Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
format masterThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.6/6632
TID:202028461
url http://hdl.handle.net/10400.6/6632
identifier_str_mv TID:202028461
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv
_version_ 1799136368450863104