Volatilomics reveals potential biomarkers for identification of renal cell carcinoma: an in vitro approach

Detalhes bibliográficos
Autor(a) principal: Amaro, Filipa
Data de Publicação: 2020
Outros Autores: Pinto, Joana, Rocha, Sílvia, Araújo, Ana Margarida, Miranda-Gonçalves, Vera, Jerónimo, Carmen, Henrique, Rui, Bastos, Maria de Lourdes, Carvalho, Márcia, Guedes de Pinho, Paula
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10284/9974
Resumo: The identification of noninvasive biomarkers able to detect renal cell carcinoma (RCC) at an early stage remains an unmet clinical need. The recognition that altered metabolism is a core hallmark of cancer boosted metabolomic studies focused in the search for cancer biomarkers. The present work aims to evaluate the performance of the volatile metabolites present in the extracellular medium to discriminate RCC cell lines with distinct histological subtypes (clear cell and papillary) and metastatic potential from non-tumorigenic renal cells. Hence, volatile organic compounds (VOCs) and volatile carbonyl compounds (VCCs) were extracted by headspace solid-phase microextraction (HS-SPME) and analyzed by gas chromatography-mass spectrometry (GC-MS). Multivariate and univariate analysis unveiled a panel of metabolites responsible for the separation between groups, mostly belonging to ketones, alcohols, alkanes and aldehydes classes. Some metabolites were found similarly altered for all RCC cell lines compared to non-tumorigenic cells, namely 2-ethylhexanol, tetradecane, formaldehyde, acetone (increased) and cyclohexanone and acetaldehyde (decreased). Furthermore, significantly altered levels of cyclohexanol, decanal, decane, dodecane and 4-methylbenzaldehyde were observed in all metastatic RCC cell lines when compared with the non-metastatic ones. Moreover, some alterations in the volatile composition were also observed between RCC histological subtypes. Overall, our results demonstrate the potential of volatile profiling for identification of noninvasive candidate biomarkers for early RCC diagnosis.
id RCAP_253b80c9629045861e7b3dad9ac8540c
oai_identifier_str oai:bdigital.ufp.pt:10284/9974
network_acronym_str RCAP
network_name_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository_id_str 7160
spelling Volatilomics reveals potential biomarkers for identification of renal cell carcinoma: an in vitro approachRenal cell carcinomaCell linesMetabolomicsVolatile compoundsHS-SPME/GC–MSBiomarkersThe identification of noninvasive biomarkers able to detect renal cell carcinoma (RCC) at an early stage remains an unmet clinical need. The recognition that altered metabolism is a core hallmark of cancer boosted metabolomic studies focused in the search for cancer biomarkers. The present work aims to evaluate the performance of the volatile metabolites present in the extracellular medium to discriminate RCC cell lines with distinct histological subtypes (clear cell and papillary) and metastatic potential from non-tumorigenic renal cells. Hence, volatile organic compounds (VOCs) and volatile carbonyl compounds (VCCs) were extracted by headspace solid-phase microextraction (HS-SPME) and analyzed by gas chromatography-mass spectrometry (GC-MS). Multivariate and univariate analysis unveiled a panel of metabolites responsible for the separation between groups, mostly belonging to ketones, alcohols, alkanes and aldehydes classes. Some metabolites were found similarly altered for all RCC cell lines compared to non-tumorigenic cells, namely 2-ethylhexanol, tetradecane, formaldehyde, acetone (increased) and cyclohexanone and acetaldehyde (decreased). Furthermore, significantly altered levels of cyclohexanol, decanal, decane, dodecane and 4-methylbenzaldehyde were observed in all metastatic RCC cell lines when compared with the non-metastatic ones. Moreover, some alterations in the volatile composition were also observed between RCC histological subtypes. Overall, our results demonstrate the potential of volatile profiling for identification of noninvasive candidate biomarkers for early RCC diagnosis.MDPIRepositório Institucional da Universidade Fernando PessoaAmaro, FilipaPinto, JoanaRocha, SílviaAraújo, Ana MargaridaMiranda-Gonçalves, VeraJerónimo, CarmenHenrique, RuiBastos, Maria de LourdesCarvalho, MárciaGuedes de Pinho, Paula2021-06-29T16:51:00Z2020-01-01T00:00:00Z2020-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10284/9974eng2218-198910.3390/metabo10050174info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2022-09-06T02:09:16Zoai:bdigital.ufp.pt:10284/9974Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T15:46:45.256247Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Volatilomics reveals potential biomarkers for identification of renal cell carcinoma: an in vitro approach
title Volatilomics reveals potential biomarkers for identification of renal cell carcinoma: an in vitro approach
spellingShingle Volatilomics reveals potential biomarkers for identification of renal cell carcinoma: an in vitro approach
Amaro, Filipa
Renal cell carcinoma
Cell lines
Metabolomics
Volatile compounds
HS-SPME/GC–MS
Biomarkers
title_short Volatilomics reveals potential biomarkers for identification of renal cell carcinoma: an in vitro approach
title_full Volatilomics reveals potential biomarkers for identification of renal cell carcinoma: an in vitro approach
title_fullStr Volatilomics reveals potential biomarkers for identification of renal cell carcinoma: an in vitro approach
title_full_unstemmed Volatilomics reveals potential biomarkers for identification of renal cell carcinoma: an in vitro approach
title_sort Volatilomics reveals potential biomarkers for identification of renal cell carcinoma: an in vitro approach
author Amaro, Filipa
author_facet Amaro, Filipa
Pinto, Joana
Rocha, Sílvia
Araújo, Ana Margarida
Miranda-Gonçalves, Vera
Jerónimo, Carmen
Henrique, Rui
Bastos, Maria de Lourdes
Carvalho, Márcia
Guedes de Pinho, Paula
author_role author
author2 Pinto, Joana
Rocha, Sílvia
Araújo, Ana Margarida
Miranda-Gonçalves, Vera
Jerónimo, Carmen
Henrique, Rui
Bastos, Maria de Lourdes
Carvalho, Márcia
Guedes de Pinho, Paula
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Repositório Institucional da Universidade Fernando Pessoa
dc.contributor.author.fl_str_mv Amaro, Filipa
Pinto, Joana
Rocha, Sílvia
Araújo, Ana Margarida
Miranda-Gonçalves, Vera
Jerónimo, Carmen
Henrique, Rui
Bastos, Maria de Lourdes
Carvalho, Márcia
Guedes de Pinho, Paula
dc.subject.por.fl_str_mv Renal cell carcinoma
Cell lines
Metabolomics
Volatile compounds
HS-SPME/GC–MS
Biomarkers
topic Renal cell carcinoma
Cell lines
Metabolomics
Volatile compounds
HS-SPME/GC–MS
Biomarkers
description The identification of noninvasive biomarkers able to detect renal cell carcinoma (RCC) at an early stage remains an unmet clinical need. The recognition that altered metabolism is a core hallmark of cancer boosted metabolomic studies focused in the search for cancer biomarkers. The present work aims to evaluate the performance of the volatile metabolites present in the extracellular medium to discriminate RCC cell lines with distinct histological subtypes (clear cell and papillary) and metastatic potential from non-tumorigenic renal cells. Hence, volatile organic compounds (VOCs) and volatile carbonyl compounds (VCCs) were extracted by headspace solid-phase microextraction (HS-SPME) and analyzed by gas chromatography-mass spectrometry (GC-MS). Multivariate and univariate analysis unveiled a panel of metabolites responsible for the separation between groups, mostly belonging to ketones, alcohols, alkanes and aldehydes classes. Some metabolites were found similarly altered for all RCC cell lines compared to non-tumorigenic cells, namely 2-ethylhexanol, tetradecane, formaldehyde, acetone (increased) and cyclohexanone and acetaldehyde (decreased). Furthermore, significantly altered levels of cyclohexanol, decanal, decane, dodecane and 4-methylbenzaldehyde were observed in all metastatic RCC cell lines when compared with the non-metastatic ones. Moreover, some alterations in the volatile composition were also observed between RCC histological subtypes. Overall, our results demonstrate the potential of volatile profiling for identification of noninvasive candidate biomarkers for early RCC diagnosis.
publishDate 2020
dc.date.none.fl_str_mv 2020-01-01T00:00:00Z
2020-01-01T00:00:00Z
2021-06-29T16:51:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10284/9974
url http://hdl.handle.net/10284/9974
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 2218-1989
10.3390/metabo10050174
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv MDPI
publisher.none.fl_str_mv MDPI
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv
_version_ 1799130333796368384