Predicting progression of mild cognitive impairment to dementia using neuropsychological data: a supervised learning approach using time windows

Detalhes bibliográficos
Autor(a) principal: Pereira, Telma
Data de Publicação: 2017
Outros Autores: Lemos, Luís, Cardoso, Sandra, Silva, Dina, Rodrigues, Ana, Santana, Isabel, Mendonça, Alexandre de, Guerreiro, Manuela, Madeira, Sara C.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10316/108106
https://doi.org/10.1186/s12911-017-0497-2
Resumo: Background: Predicting progression from a stage of Mild Cognitive Impairment to dementia is a major pursuit in current research. It is broadly accepted that cognition declines with a continuum between MCI and dementia. As such, cohorts of MCI patients are usually heterogeneous, containing patients at different stages of the neurodegenerative process. This hampers the prognostic task. Nevertheless, when learning prognostic models, most studies use the entire cohort of MCI patients regardless of their disease stages. In this paper, we propose a Time Windows approach to predict conversion to dementia, learning with patients stratified using time windows, thus fine-tuning the prognosis regarding the time to conversion. Methods: In the proposed Time Windows approach, we grouped patients based on the clinical information of whether they converted (converter MCI) or remained MCI (stable MCI) within a specific time window. We tested time windows of 2, 3, 4 and 5 years. We developed a prognostic model for each time window using clinical and neuropsychological data and compared this approach with the commonly used in the literature, where all patients are used to learn the models, named as First Last approach. This enables to move from the traditional question “Will a MCI patient convert to dementia somewhere in the future” to the question “Will a MCI patient convert to dementia in a specific time window”. Results: The proposed Time Windows approach outperformed the First Last approach. The results showed that we can predict conversion to dementia as early as 5 years before the event with an AUC of 0.88 in the cross-validation set and 0.76 in an independent validation set. Conclusions: Prognostic models using time windows have higher performance when predicting progression from MCI to dementia, when compared to the prognostic approach commonly used in the literature. Furthermore, the proposed Time Windows approach is more relevant from a clinical point of view, predicting conversion within a temporal interval rather than sometime in the future and allowing clinicians to timely adjust treatments and clinical appointments.
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spelling Predicting progression of mild cognitive impairment to dementia using neuropsychological data: a supervised learning approach using time windowsNeurodegenerative diseasesMild cognitive impairmentPrognostic predictionTime windowsSupervised learningNeuropsychological dataCognitive DysfunctionDementiaHumansNeuropsychological TestsPrognosisTime FactorsDisease ProgressionModels, TheoreticalSupervised Machine LearningBackground: Predicting progression from a stage of Mild Cognitive Impairment to dementia is a major pursuit in current research. It is broadly accepted that cognition declines with a continuum between MCI and dementia. As such, cohorts of MCI patients are usually heterogeneous, containing patients at different stages of the neurodegenerative process. This hampers the prognostic task. Nevertheless, when learning prognostic models, most studies use the entire cohort of MCI patients regardless of their disease stages. In this paper, we propose a Time Windows approach to predict conversion to dementia, learning with patients stratified using time windows, thus fine-tuning the prognosis regarding the time to conversion. Methods: In the proposed Time Windows approach, we grouped patients based on the clinical information of whether they converted (converter MCI) or remained MCI (stable MCI) within a specific time window. We tested time windows of 2, 3, 4 and 5 years. We developed a prognostic model for each time window using clinical and neuropsychological data and compared this approach with the commonly used in the literature, where all patients are used to learn the models, named as First Last approach. This enables to move from the traditional question “Will a MCI patient convert to dementia somewhere in the future” to the question “Will a MCI patient convert to dementia in a specific time window”. Results: The proposed Time Windows approach outperformed the First Last approach. The results showed that we can predict conversion to dementia as early as 5 years before the event with an AUC of 0.88 in the cross-validation set and 0.76 in an independent validation set. Conclusions: Prognostic models using time windows have higher performance when predicting progression from MCI to dementia, when compared to the prognostic approach commonly used in the literature. Furthermore, the proposed Time Windows approach is more relevant from a clinical point of view, predicting conversion within a temporal interval rather than sometime in the future and allowing clinicians to timely adjust treatments and clinical appointments.Springer Nature2017-07-19info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/10316/108106http://hdl.handle.net/10316/108106https://doi.org/10.1186/s12911-017-0497-2eng1472-6947Pereira, TelmaLemos, LuísCardoso, SandraSilva, DinaRodrigues, AnaSantana, IsabelMendonça, Alexandre deGuerreiro, ManuelaMadeira, Sara C.info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-08-11T15:15:40Zoai:estudogeral.uc.pt:10316/108106Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T21:24:22.413758Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Predicting progression of mild cognitive impairment to dementia using neuropsychological data: a supervised learning approach using time windows
title Predicting progression of mild cognitive impairment to dementia using neuropsychological data: a supervised learning approach using time windows
spellingShingle Predicting progression of mild cognitive impairment to dementia using neuropsychological data: a supervised learning approach using time windows
Pereira, Telma
Neurodegenerative diseases
Mild cognitive impairment
Prognostic prediction
Time windows
Supervised learning
Neuropsychological data
Cognitive Dysfunction
Dementia
Humans
Neuropsychological Tests
Prognosis
Time Factors
Disease Progression
Models, Theoretical
Supervised Machine Learning
title_short Predicting progression of mild cognitive impairment to dementia using neuropsychological data: a supervised learning approach using time windows
title_full Predicting progression of mild cognitive impairment to dementia using neuropsychological data: a supervised learning approach using time windows
title_fullStr Predicting progression of mild cognitive impairment to dementia using neuropsychological data: a supervised learning approach using time windows
title_full_unstemmed Predicting progression of mild cognitive impairment to dementia using neuropsychological data: a supervised learning approach using time windows
title_sort Predicting progression of mild cognitive impairment to dementia using neuropsychological data: a supervised learning approach using time windows
author Pereira, Telma
author_facet Pereira, Telma
Lemos, Luís
Cardoso, Sandra
Silva, Dina
Rodrigues, Ana
Santana, Isabel
Mendonça, Alexandre de
Guerreiro, Manuela
Madeira, Sara C.
author_role author
author2 Lemos, Luís
Cardoso, Sandra
Silva, Dina
Rodrigues, Ana
Santana, Isabel
Mendonça, Alexandre de
Guerreiro, Manuela
Madeira, Sara C.
author2_role author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Pereira, Telma
Lemos, Luís
Cardoso, Sandra
Silva, Dina
Rodrigues, Ana
Santana, Isabel
Mendonça, Alexandre de
Guerreiro, Manuela
Madeira, Sara C.
dc.subject.por.fl_str_mv Neurodegenerative diseases
Mild cognitive impairment
Prognostic prediction
Time windows
Supervised learning
Neuropsychological data
Cognitive Dysfunction
Dementia
Humans
Neuropsychological Tests
Prognosis
Time Factors
Disease Progression
Models, Theoretical
Supervised Machine Learning
topic Neurodegenerative diseases
Mild cognitive impairment
Prognostic prediction
Time windows
Supervised learning
Neuropsychological data
Cognitive Dysfunction
Dementia
Humans
Neuropsychological Tests
Prognosis
Time Factors
Disease Progression
Models, Theoretical
Supervised Machine Learning
description Background: Predicting progression from a stage of Mild Cognitive Impairment to dementia is a major pursuit in current research. It is broadly accepted that cognition declines with a continuum between MCI and dementia. As such, cohorts of MCI patients are usually heterogeneous, containing patients at different stages of the neurodegenerative process. This hampers the prognostic task. Nevertheless, when learning prognostic models, most studies use the entire cohort of MCI patients regardless of their disease stages. In this paper, we propose a Time Windows approach to predict conversion to dementia, learning with patients stratified using time windows, thus fine-tuning the prognosis regarding the time to conversion. Methods: In the proposed Time Windows approach, we grouped patients based on the clinical information of whether they converted (converter MCI) or remained MCI (stable MCI) within a specific time window. We tested time windows of 2, 3, 4 and 5 years. We developed a prognostic model for each time window using clinical and neuropsychological data and compared this approach with the commonly used in the literature, where all patients are used to learn the models, named as First Last approach. This enables to move from the traditional question “Will a MCI patient convert to dementia somewhere in the future” to the question “Will a MCI patient convert to dementia in a specific time window”. Results: The proposed Time Windows approach outperformed the First Last approach. The results showed that we can predict conversion to dementia as early as 5 years before the event with an AUC of 0.88 in the cross-validation set and 0.76 in an independent validation set. Conclusions: Prognostic models using time windows have higher performance when predicting progression from MCI to dementia, when compared to the prognostic approach commonly used in the literature. Furthermore, the proposed Time Windows approach is more relevant from a clinical point of view, predicting conversion within a temporal interval rather than sometime in the future and allowing clinicians to timely adjust treatments and clinical appointments.
publishDate 2017
dc.date.none.fl_str_mv 2017-07-19
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10316/108106
http://hdl.handle.net/10316/108106
https://doi.org/10.1186/s12911-017-0497-2
url http://hdl.handle.net/10316/108106
https://doi.org/10.1186/s12911-017-0497-2
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 1472-6947
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.publisher.none.fl_str_mv Springer Nature
publisher.none.fl_str_mv Springer Nature
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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