The expression of tubulin cofactor A (TBCA) is regulated by a noncoding antisense Tbca RNA during testis maturation

Detalhes bibliográficos
Autor(a) principal: Nolasco, Sofia
Data de Publicação: 2012
Outros Autores: Bellido, Javier, Gonçalves, João, Zabala, Juan Carlos, Soares, Helena, Tavares, Alexandra
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.21/2083
Resumo: Abstract - Recently, long noncoding RNAs have emerged as pivotal molecules for the regulation of coding genes' expression. These molecules might result from antisense transcription of functional genes originating natural antisense transcripts (NATs) or from transcriptional active pseudogenes. TBCA interacts with β-tubulin and is involved in the folding and dimerization of new tubulin heterodimers, the building blocks of microtubules. Methodology/Principal findings: We found that the mouse genome contains two structurally distinct Tbca genes located in chromosomes 13 (Tbca13) and 16 (Tbca16). Interestingly, the two Tbca genes albeit ubiquitously expressed, present differential expression during mouse testis maturation. In fact, as testis maturation progresses Tbca13 mRNA levels increase progressively, while Tbca16 mRNA levels decrease. This suggests a regulatory mechanism between the two genes and prompted us to investigate the presence of the two proteins. However, using tandem mass spectrometry we were unable to identify the TBCA16 protein in testis extracts even in those corresponding to the maturation step with the highest levels of Tbca16 transcripts. These puzzling results led us to re-analyze the expression of Tbca16. We then detected that Tbca16 transcription produces sense and natural antisense transcripts. Strikingly, the specific depletion by RNAi of these transcripts leads to an increase of Tbca13 transcript levels in a mouse spermatocyte cell line. Conclusions/Significance: Our results demonstrate that Tbca13 mRNA levels are post-transcriptionally regulated by the sense and natural antisense Tbca16 mRNA levels. We propose that this regulatory mechanism operates during spermatogenesis, a process that involves microtubule rearrangements, the assembly of specific microtubule structures and requires critical TBCA levels.
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spelling The expression of tubulin cofactor A (TBCA) is regulated by a noncoding antisense Tbca RNA during testis maturationAmino acid sequenceAnimalsBase sequenceCell lineChromosomes, mammalian/geneticsGene expression regulation, developmentalGene knockdown techniquesGenome/geneticsMaleMiceMicrotubule-associated proteins/chemistryMicrotubule-associated proteins/geneticsMicrotubule-associated proteins/metabolismModels, molecularMolecular chaperones/chemistryMolecular chaperones/geneticsMolecular chaperones/metabolismMolecular sequence dataRNA, Antisense/geneticsRNA, Antisense/metabolismRNA, Messenger/geneticsRNA, Messenger/metabolismRNA, Untranslated/geneticsRNA, Untranslated/metabolismSpermatocytes/metabolismSpermatogenesis/geneticsTestis/growth & developmentTestis/metabolismTranscription, GeneticAbstract - Recently, long noncoding RNAs have emerged as pivotal molecules for the regulation of coding genes' expression. These molecules might result from antisense transcription of functional genes originating natural antisense transcripts (NATs) or from transcriptional active pseudogenes. TBCA interacts with β-tubulin and is involved in the folding and dimerization of new tubulin heterodimers, the building blocks of microtubules. Methodology/Principal findings: We found that the mouse genome contains two structurally distinct Tbca genes located in chromosomes 13 (Tbca13) and 16 (Tbca16). Interestingly, the two Tbca genes albeit ubiquitously expressed, present differential expression during mouse testis maturation. In fact, as testis maturation progresses Tbca13 mRNA levels increase progressively, while Tbca16 mRNA levels decrease. This suggests a regulatory mechanism between the two genes and prompted us to investigate the presence of the two proteins. However, using tandem mass spectrometry we were unable to identify the TBCA16 protein in testis extracts even in those corresponding to the maturation step with the highest levels of Tbca16 transcripts. These puzzling results led us to re-analyze the expression of Tbca16. We then detected that Tbca16 transcription produces sense and natural antisense transcripts. Strikingly, the specific depletion by RNAi of these transcripts leads to an increase of Tbca13 transcript levels in a mouse spermatocyte cell line. Conclusions/Significance: Our results demonstrate that Tbca13 mRNA levels are post-transcriptionally regulated by the sense and natural antisense Tbca16 mRNA levels. We propose that this regulatory mechanism operates during spermatogenesis, a process that involves microtubule rearrangements, the assembly of specific microtubule structures and requires critical TBCA levels.PLoSRCIPLNolasco, SofiaBellido, JavierGonçalves, JoãoZabala, Juan CarlosSoares, HelenaTavares, Alexandra2013-01-29T15:23:29Z2012-082012-08-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.21/2083engNolasco S, Bellido J, Gonçalves J, Tavares A, Zabala JC, Soares H. The expression of tubulin cofactor A (TBCA) is regulated by a noncoding antisense Tbca RNA during testis maturation. PLoS ONE. 2012;7(8):e42536.1932-6203info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-08-03T09:40:47Zoai:repositorio.ipl.pt:10400.21/2083Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T20:11:54.561428Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv The expression of tubulin cofactor A (TBCA) is regulated by a noncoding antisense Tbca RNA during testis maturation
title The expression of tubulin cofactor A (TBCA) is regulated by a noncoding antisense Tbca RNA during testis maturation
spellingShingle The expression of tubulin cofactor A (TBCA) is regulated by a noncoding antisense Tbca RNA during testis maturation
Nolasco, Sofia
Amino acid sequence
Animals
Base sequence
Cell line
Chromosomes, mammalian/genetics
Gene expression regulation, developmental
Gene knockdown techniques
Genome/genetics
Male
Mice
Microtubule-associated proteins/chemistry
Microtubule-associated proteins/genetics
Microtubule-associated proteins/metabolism
Models, molecular
Molecular chaperones/chemistry
Molecular chaperones/genetics
Molecular chaperones/metabolism
Molecular sequence data
RNA, Antisense/genetics
RNA, Antisense/metabolism
RNA, Messenger/genetics
RNA, Messenger/metabolism
RNA, Untranslated/genetics
RNA, Untranslated/metabolism
Spermatocytes/metabolism
Spermatogenesis/genetics
Testis/growth & development
Testis/metabolism
Transcription, Genetic
title_short The expression of tubulin cofactor A (TBCA) is regulated by a noncoding antisense Tbca RNA during testis maturation
title_full The expression of tubulin cofactor A (TBCA) is regulated by a noncoding antisense Tbca RNA during testis maturation
title_fullStr The expression of tubulin cofactor A (TBCA) is regulated by a noncoding antisense Tbca RNA during testis maturation
title_full_unstemmed The expression of tubulin cofactor A (TBCA) is regulated by a noncoding antisense Tbca RNA during testis maturation
title_sort The expression of tubulin cofactor A (TBCA) is regulated by a noncoding antisense Tbca RNA during testis maturation
author Nolasco, Sofia
author_facet Nolasco, Sofia
Bellido, Javier
Gonçalves, João
Zabala, Juan Carlos
Soares, Helena
Tavares, Alexandra
author_role author
author2 Bellido, Javier
Gonçalves, João
Zabala, Juan Carlos
Soares, Helena
Tavares, Alexandra
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv RCIPL
dc.contributor.author.fl_str_mv Nolasco, Sofia
Bellido, Javier
Gonçalves, João
Zabala, Juan Carlos
Soares, Helena
Tavares, Alexandra
dc.subject.por.fl_str_mv Amino acid sequence
Animals
Base sequence
Cell line
Chromosomes, mammalian/genetics
Gene expression regulation, developmental
Gene knockdown techniques
Genome/genetics
Male
Mice
Microtubule-associated proteins/chemistry
Microtubule-associated proteins/genetics
Microtubule-associated proteins/metabolism
Models, molecular
Molecular chaperones/chemistry
Molecular chaperones/genetics
Molecular chaperones/metabolism
Molecular sequence data
RNA, Antisense/genetics
RNA, Antisense/metabolism
RNA, Messenger/genetics
RNA, Messenger/metabolism
RNA, Untranslated/genetics
RNA, Untranslated/metabolism
Spermatocytes/metabolism
Spermatogenesis/genetics
Testis/growth & development
Testis/metabolism
Transcription, Genetic
topic Amino acid sequence
Animals
Base sequence
Cell line
Chromosomes, mammalian/genetics
Gene expression regulation, developmental
Gene knockdown techniques
Genome/genetics
Male
Mice
Microtubule-associated proteins/chemistry
Microtubule-associated proteins/genetics
Microtubule-associated proteins/metabolism
Models, molecular
Molecular chaperones/chemistry
Molecular chaperones/genetics
Molecular chaperones/metabolism
Molecular sequence data
RNA, Antisense/genetics
RNA, Antisense/metabolism
RNA, Messenger/genetics
RNA, Messenger/metabolism
RNA, Untranslated/genetics
RNA, Untranslated/metabolism
Spermatocytes/metabolism
Spermatogenesis/genetics
Testis/growth & development
Testis/metabolism
Transcription, Genetic
description Abstract - Recently, long noncoding RNAs have emerged as pivotal molecules for the regulation of coding genes' expression. These molecules might result from antisense transcription of functional genes originating natural antisense transcripts (NATs) or from transcriptional active pseudogenes. TBCA interacts with β-tubulin and is involved in the folding and dimerization of new tubulin heterodimers, the building blocks of microtubules. Methodology/Principal findings: We found that the mouse genome contains two structurally distinct Tbca genes located in chromosomes 13 (Tbca13) and 16 (Tbca16). Interestingly, the two Tbca genes albeit ubiquitously expressed, present differential expression during mouse testis maturation. In fact, as testis maturation progresses Tbca13 mRNA levels increase progressively, while Tbca16 mRNA levels decrease. This suggests a regulatory mechanism between the two genes and prompted us to investigate the presence of the two proteins. However, using tandem mass spectrometry we were unable to identify the TBCA16 protein in testis extracts even in those corresponding to the maturation step with the highest levels of Tbca16 transcripts. These puzzling results led us to re-analyze the expression of Tbca16. We then detected that Tbca16 transcription produces sense and natural antisense transcripts. Strikingly, the specific depletion by RNAi of these transcripts leads to an increase of Tbca13 transcript levels in a mouse spermatocyte cell line. Conclusions/Significance: Our results demonstrate that Tbca13 mRNA levels are post-transcriptionally regulated by the sense and natural antisense Tbca16 mRNA levels. We propose that this regulatory mechanism operates during spermatogenesis, a process that involves microtubule rearrangements, the assembly of specific microtubule structures and requires critical TBCA levels.
publishDate 2012
dc.date.none.fl_str_mv 2012-08
2012-08-01T00:00:00Z
2013-01-29T15:23:29Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.21/2083
url http://hdl.handle.net/10400.21/2083
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Nolasco S, Bellido J, Gonçalves J, Tavares A, Zabala JC, Soares H. The expression of tubulin cofactor A (TBCA) is regulated by a noncoding antisense Tbca RNA during testis maturation. PLoS ONE. 2012;7(8):e42536.
1932-6203
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv PLoS
publisher.none.fl_str_mv PLoS
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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