Sensing hydration and behavior of pyrene in POPC and POPC/cholesterol bilayers: A molecular dynamics study

Detalhes bibliográficos
Autor(a) principal: Loura, Luís M. S.
Data de Publicação: 2013
Outros Autores: Martins do Canto, Antonio M. T., Martins, Jorge
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.1/11655
Resumo: Molecular dynamics (MD) simulations of bilayers of 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC) with varying amounts of cholesterol (0, 5, 20, and 40 mol%) were carried out in the absence and presence of inserted pyrene molecules. Both fluorophore and bilayer parameters were computed, for characterization of probe location and dynamics, as well as its effects on the host bilayer. In agreement with previous studies in fluid disordered bilayers, pyrene prefers to be located in the hydrophobic acyl chain region of POPC bilayers, close to the glycerol group of lipid molecules and causes ordering of the lipid acyl chains. However, incorporation of pyrene in binary POPC/cholesterol bilayers decreases the acyl chain order parameter (especially near the end of the chains), opposing the ordering effect of cholesterol. These effects are modest and mainly felt locally. Significantly, as the bilayer is enriched with cholesterol, the relative position of pyrene and the POPC carbonyl and phosphocholine groups is invariant, and the local water density around the probe decreases. This work clarifies and supports the cautious use of pyrene Ham effect to effectively measure equivalent polarity in lipid bilayers. Within the time scale of the MD simulations, which is of the magnitude of the fluorescence lifetime of pyrene, the thermally averaged polarity of lipid bilayers is nearly out of influence of spurious uncertainty in the transverse location of pyrene in the bilayers. This renders the values of equivalent polarity measurements through the pyrene Ham effect more reliable and reproducible than previously expected. (C) 2012 Elsevier B.V. All rights reserved.
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spelling Sensing hydration and behavior of pyrene in POPC and POPC/cholesterol bilayers: A molecular dynamics studyPhospholipid-BilayersModel MembranesLipid-BilayerBiological-MembranesDppc BilayerSimulationsCholesterolProbesTemperaturePerspectiveMolecular dynamics (MD) simulations of bilayers of 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC) with varying amounts of cholesterol (0, 5, 20, and 40 mol%) were carried out in the absence and presence of inserted pyrene molecules. Both fluorophore and bilayer parameters were computed, for characterization of probe location and dynamics, as well as its effects on the host bilayer. In agreement with previous studies in fluid disordered bilayers, pyrene prefers to be located in the hydrophobic acyl chain region of POPC bilayers, close to the glycerol group of lipid molecules and causes ordering of the lipid acyl chains. However, incorporation of pyrene in binary POPC/cholesterol bilayers decreases the acyl chain order parameter (especially near the end of the chains), opposing the ordering effect of cholesterol. These effects are modest and mainly felt locally. Significantly, as the bilayer is enriched with cholesterol, the relative position of pyrene and the POPC carbonyl and phosphocholine groups is invariant, and the local water density around the probe decreases. This work clarifies and supports the cautious use of pyrene Ham effect to effectively measure equivalent polarity in lipid bilayers. Within the time scale of the MD simulations, which is of the magnitude of the fluorescence lifetime of pyrene, the thermally averaged polarity of lipid bilayers is nearly out of influence of spurious uncertainty in the transverse location of pyrene in the bilayers. This renders the values of equivalent polarity measurements through the pyrene Ham effect more reliable and reproducible than previously expected. (C) 2012 Elsevier B.V. All rights reserved.FEDER, through the COMPETE program; FCT (Fundacao para a Ciencia e a Tecnologia, Portugal) [FCOMP-01-0124-FEDER-010787 (FCT PTDC/QUI-QUI/098198/2008)]; FCT - Fundacao para a Ciencia e a Tecnologia [PEst-OE/EQB/LA0023/2011, PTDC/QUI-BIQ/112943/2009]Elsevier Science BvSapientiaLoura, Luís M. S.Martins do Canto, Antonio M. T.Martins, Jorge2018-12-07T14:53:43Z2013-032013-03-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.1/11655eng0005-273610.1016/j.bbamem.2012.12.014info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-24T10:23:30Zoai:sapientia.ualg.pt:10400.1/11655Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T20:03:07.928379Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Sensing hydration and behavior of pyrene in POPC and POPC/cholesterol bilayers: A molecular dynamics study
title Sensing hydration and behavior of pyrene in POPC and POPC/cholesterol bilayers: A molecular dynamics study
spellingShingle Sensing hydration and behavior of pyrene in POPC and POPC/cholesterol bilayers: A molecular dynamics study
Loura, Luís M. S.
Phospholipid-Bilayers
Model Membranes
Lipid-Bilayer
Biological-Membranes
Dppc Bilayer
Simulations
Cholesterol
Probes
Temperature
Perspective
title_short Sensing hydration and behavior of pyrene in POPC and POPC/cholesterol bilayers: A molecular dynamics study
title_full Sensing hydration and behavior of pyrene in POPC and POPC/cholesterol bilayers: A molecular dynamics study
title_fullStr Sensing hydration and behavior of pyrene in POPC and POPC/cholesterol bilayers: A molecular dynamics study
title_full_unstemmed Sensing hydration and behavior of pyrene in POPC and POPC/cholesterol bilayers: A molecular dynamics study
title_sort Sensing hydration and behavior of pyrene in POPC and POPC/cholesterol bilayers: A molecular dynamics study
author Loura, Luís M. S.
author_facet Loura, Luís M. S.
Martins do Canto, Antonio M. T.
Martins, Jorge
author_role author
author2 Martins do Canto, Antonio M. T.
Martins, Jorge
author2_role author
author
dc.contributor.none.fl_str_mv Sapientia
dc.contributor.author.fl_str_mv Loura, Luís M. S.
Martins do Canto, Antonio M. T.
Martins, Jorge
dc.subject.por.fl_str_mv Phospholipid-Bilayers
Model Membranes
Lipid-Bilayer
Biological-Membranes
Dppc Bilayer
Simulations
Cholesterol
Probes
Temperature
Perspective
topic Phospholipid-Bilayers
Model Membranes
Lipid-Bilayer
Biological-Membranes
Dppc Bilayer
Simulations
Cholesterol
Probes
Temperature
Perspective
description Molecular dynamics (MD) simulations of bilayers of 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC) with varying amounts of cholesterol (0, 5, 20, and 40 mol%) were carried out in the absence and presence of inserted pyrene molecules. Both fluorophore and bilayer parameters were computed, for characterization of probe location and dynamics, as well as its effects on the host bilayer. In agreement with previous studies in fluid disordered bilayers, pyrene prefers to be located in the hydrophobic acyl chain region of POPC bilayers, close to the glycerol group of lipid molecules and causes ordering of the lipid acyl chains. However, incorporation of pyrene in binary POPC/cholesterol bilayers decreases the acyl chain order parameter (especially near the end of the chains), opposing the ordering effect of cholesterol. These effects are modest and mainly felt locally. Significantly, as the bilayer is enriched with cholesterol, the relative position of pyrene and the POPC carbonyl and phosphocholine groups is invariant, and the local water density around the probe decreases. This work clarifies and supports the cautious use of pyrene Ham effect to effectively measure equivalent polarity in lipid bilayers. Within the time scale of the MD simulations, which is of the magnitude of the fluorescence lifetime of pyrene, the thermally averaged polarity of lipid bilayers is nearly out of influence of spurious uncertainty in the transverse location of pyrene in the bilayers. This renders the values of equivalent polarity measurements through the pyrene Ham effect more reliable and reproducible than previously expected. (C) 2012 Elsevier B.V. All rights reserved.
publishDate 2013
dc.date.none.fl_str_mv 2013-03
2013-03-01T00:00:00Z
2018-12-07T14:53:43Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.1/11655
url http://hdl.handle.net/10400.1/11655
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 0005-2736
10.1016/j.bbamem.2012.12.014
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.publisher.none.fl_str_mv Elsevier Science Bv
publisher.none.fl_str_mv Elsevier Science Bv
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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