Corksorb enhances alkane degradation by hydrocarbonoclastic bacteria

Detalhes bibliográficos
Autor(a) principal: Martins, Valdo R.
Data de Publicação: 2021
Outros Autores: Freitas, C., Castro, Rita, Silva, Ana Rita Marques, Gudiña, Eduardo José, Sequeira, J. C., Salvador, Andreia Filipa Ferreira, Pereira, M. A., Cavaleiro, Ana Júlia
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: https://hdl.handle.net/1822/74010
Resumo: Biosorbent materials are effective in the removal of spilled oil from water, but their effect on hydrocarbonoclastic bacteria is not known. Here, we show that corksorb, a cork-based biosorbent, enhances growth and alkane degradation by Rhodococcus opacus B4 (Ro) and Alcanivorax borkumensis SK2 (Ab). Ro and Ab degraded 96 ± 1% and 72 ± 2%, respectively, of a mixture of n-alkanes (2 g L1) in the presence of corksorb. These values represent an increase of 6 and 24%, respectively, relative to the assays without corksorb. The biosorbent also increased the growth of Ab by 51%. However, no significant changes were detected in the expression of genes involved in alkane uptake and degradation in the presence of corksorb relative to the control without the biosorbent. Nevertheless, transcriptomics analysis revealed an increased expression of rRNA and tRNA coding genes, which confirms the higher metabolic activity of Ab in the presence of corksorb. The effect of corksorb is not related to the release of soluble stimulating compounds, but rather to the presence of the biosorbent, which was shown to be essential. Indeed, scanning electron microscopy images and downregulation of pili formation coding genes, which are involved in cell mobility, suggest that cell attachment on corksorb is a determinant for the improved activity. Furthermore, the existence of native alkane-degrading bacteria in corksorb was revealed, which may assist in situ bioremediation. Hence, the use of corksorb in marine oil spills may induce a combined effect of sorption and stimulated biodegradation, with high potential for enhancing in situ bioremediation processes. © Copyright © 2021 Martins, Freitas, Castro, Silva, Gudiña, Sequeira, Salvador, Pereira and Cavaleiro.
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spelling Corksorb enhances alkane degradation by hydrocarbonoclastic bacteriaAlcanivorax borkumensisAlkanesBioremediationBiosorbentComparative transcriptomicsCorksorbGrowthRhodococcus opacusScience & TechnologyBiosorbent materials are effective in the removal of spilled oil from water, but their effect on hydrocarbonoclastic bacteria is not known. Here, we show that corksorb, a cork-based biosorbent, enhances growth and alkane degradation by Rhodococcus opacus B4 (Ro) and Alcanivorax borkumensis SK2 (Ab). Ro and Ab degraded 96 ± 1% and 72 ± 2%, respectively, of a mixture of n-alkanes (2 g L1) in the presence of corksorb. These values represent an increase of 6 and 24%, respectively, relative to the assays without corksorb. The biosorbent also increased the growth of Ab by 51%. However, no significant changes were detected in the expression of genes involved in alkane uptake and degradation in the presence of corksorb relative to the control without the biosorbent. Nevertheless, transcriptomics analysis revealed an increased expression of rRNA and tRNA coding genes, which confirms the higher metabolic activity of Ab in the presence of corksorb. The effect of corksorb is not related to the release of soluble stimulating compounds, but rather to the presence of the biosorbent, which was shown to be essential. Indeed, scanning electron microscopy images and downregulation of pili formation coding genes, which are involved in cell mobility, suggest that cell attachment on corksorb is a determinant for the improved activity. Furthermore, the existence of native alkane-degrading bacteria in corksorb was revealed, which may assist in situ bioremediation. Hence, the use of corksorb in marine oil spills may induce a combined effect of sorption and stimulated biodegradation, with high potential for enhancing in situ bioremediation processes. © Copyright © 2021 Martins, Freitas, Castro, Silva, Gudiña, Sequeira, Salvador, Pereira and Cavaleiro.This study was funded by the Portuguese Foundation for Science and Technology (FCT) under the scope of project MORE (POCI-01-0145-FEDER-016575) and Salt Oil+ (POCI-01-0145-FEDER-030180) and of the strategic funding of UIDB/04469/2020 unit. Research of RS and JS was supported by Ph.D. grants SFRH/BD/116154/2016 and SFRH/BD/147271/2019, respectively, funded by FCT.info:eu-repo/semantics/publishedVersionFrontiers Media S.A.Universidade do MinhoMartins, Valdo R.Freitas, C.Castro, RitaSilva, Ana Rita MarquesGudiña, Eduardo JoséSequeira, J. C.Salvador, Andreia Filipa FerreiraPereira, M. A.Cavaleiro, Ana Júlia2021-08-192021-08-19T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttps://hdl.handle.net/1822/74010engMartins, Valdo R.; Freitas, C.; Castro, Rita; Silva, Ana Rita; Gudiña, Eduardo J.; Sequeira, J. C.; Salvador, Andreia F.; Pereira, M. Alcina; Cavaleiro, Ana Júlia, Corksorb enhances alkane degradation by hydrocarbonoclastic bacteria. Frontiers in Microbiology, 12(618270), 20211664-302X10.3389/fmicb.2021.618270618270https://www.frontiersin.org/articles/10.3389/fmicb.2021.618270/fullinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:04:35Zoai:repositorium.sdum.uminho.pt:1822/74010Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T18:54:53.717396Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Corksorb enhances alkane degradation by hydrocarbonoclastic bacteria
title Corksorb enhances alkane degradation by hydrocarbonoclastic bacteria
spellingShingle Corksorb enhances alkane degradation by hydrocarbonoclastic bacteria
Martins, Valdo R.
Alcanivorax borkumensis
Alkanes
Bioremediation
Biosorbent
Comparative transcriptomics
Corksorb
Growth
Rhodococcus opacus
Science & Technology
title_short Corksorb enhances alkane degradation by hydrocarbonoclastic bacteria
title_full Corksorb enhances alkane degradation by hydrocarbonoclastic bacteria
title_fullStr Corksorb enhances alkane degradation by hydrocarbonoclastic bacteria
title_full_unstemmed Corksorb enhances alkane degradation by hydrocarbonoclastic bacteria
title_sort Corksorb enhances alkane degradation by hydrocarbonoclastic bacteria
author Martins, Valdo R.
author_facet Martins, Valdo R.
Freitas, C.
Castro, Rita
Silva, Ana Rita Marques
Gudiña, Eduardo José
Sequeira, J. C.
Salvador, Andreia Filipa Ferreira
Pereira, M. A.
Cavaleiro, Ana Júlia
author_role author
author2 Freitas, C.
Castro, Rita
Silva, Ana Rita Marques
Gudiña, Eduardo José
Sequeira, J. C.
Salvador, Andreia Filipa Ferreira
Pereira, M. A.
Cavaleiro, Ana Júlia
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv Martins, Valdo R.
Freitas, C.
Castro, Rita
Silva, Ana Rita Marques
Gudiña, Eduardo José
Sequeira, J. C.
Salvador, Andreia Filipa Ferreira
Pereira, M. A.
Cavaleiro, Ana Júlia
dc.subject.por.fl_str_mv Alcanivorax borkumensis
Alkanes
Bioremediation
Biosorbent
Comparative transcriptomics
Corksorb
Growth
Rhodococcus opacus
Science & Technology
topic Alcanivorax borkumensis
Alkanes
Bioremediation
Biosorbent
Comparative transcriptomics
Corksorb
Growth
Rhodococcus opacus
Science & Technology
description Biosorbent materials are effective in the removal of spilled oil from water, but their effect on hydrocarbonoclastic bacteria is not known. Here, we show that corksorb, a cork-based biosorbent, enhances growth and alkane degradation by Rhodococcus opacus B4 (Ro) and Alcanivorax borkumensis SK2 (Ab). Ro and Ab degraded 96 ± 1% and 72 ± 2%, respectively, of a mixture of n-alkanes (2 g L1) in the presence of corksorb. These values represent an increase of 6 and 24%, respectively, relative to the assays without corksorb. The biosorbent also increased the growth of Ab by 51%. However, no significant changes were detected in the expression of genes involved in alkane uptake and degradation in the presence of corksorb relative to the control without the biosorbent. Nevertheless, transcriptomics analysis revealed an increased expression of rRNA and tRNA coding genes, which confirms the higher metabolic activity of Ab in the presence of corksorb. The effect of corksorb is not related to the release of soluble stimulating compounds, but rather to the presence of the biosorbent, which was shown to be essential. Indeed, scanning electron microscopy images and downregulation of pili formation coding genes, which are involved in cell mobility, suggest that cell attachment on corksorb is a determinant for the improved activity. Furthermore, the existence of native alkane-degrading bacteria in corksorb was revealed, which may assist in situ bioremediation. Hence, the use of corksorb in marine oil spills may induce a combined effect of sorption and stimulated biodegradation, with high potential for enhancing in situ bioremediation processes. © Copyright © 2021 Martins, Freitas, Castro, Silva, Gudiña, Sequeira, Salvador, Pereira and Cavaleiro.
publishDate 2021
dc.date.none.fl_str_mv 2021-08-19
2021-08-19T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://hdl.handle.net/1822/74010
url https://hdl.handle.net/1822/74010
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Martins, Valdo R.; Freitas, C.; Castro, Rita; Silva, Ana Rita; Gudiña, Eduardo J.; Sequeira, J. C.; Salvador, Andreia F.; Pereira, M. Alcina; Cavaleiro, Ana Júlia, Corksorb enhances alkane degradation by hydrocarbonoclastic bacteria. Frontiers in Microbiology, 12(618270), 2021
1664-302X
10.3389/fmicb.2021.618270
618270
https://www.frontiersin.org/articles/10.3389/fmicb.2021.618270/full
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Frontiers Media S.A.
publisher.none.fl_str_mv Frontiers Media S.A.
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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