Identification of quantitative trait loci relating to flowering time, flag leaf and awn characteristics in a novel triticum dicoccum mapping population

Detalhes bibliográficos
Autor(a) principal: Wright, Tally I.C.
Data de Publicação: 2020
Outros Autores: Burnett, Angela C., Griffiths, Howard, Kadner, Maxime, Powell, James S., Oliveira, Hugo R., Leigh, Fiona J.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.1/14725
Resumo: Tetraploid landraces of wheat harbour genetic diversity that could be introgressed into modern bread wheat with the aid of marker-assisted selection to address the genetic diversity bottleneck in the breeding genepool. A novel bi-parental Triticum turgidum ssp. dicoccum Schrank mapping population was created from a cross between two landrace accessions differing for multiple physiological traits. The population was phenotyped for traits hypothesised to be proxies for characteristics associated with improved photosynthesis or drought tolerance, including flowering time, awn length, flag leaf length and width, and stomatal and trichome density. The mapping individuals and parents were genotyped with the 35K Wheat Breeders' single nucleotide polymorphism (SNP) array. A genetic linkage map was constructed from 104 F4 individuals, consisting of 2066 SNPs with a total length of 3295 cM and an average spacing of 1.6 cM. Using the population, 10 quantitative trait loci (QTLs) for five traits were identified in two years of trials. Three consistent QTLs were identified over both trials for awn length, flowering time and flag leaf width, on chromosomes 4A, 7B and 5B, respectively. The awn length and flowering time QTLs correspond with the major loci Hd and Vrn-B3, respectively. The identified marker-trait associations could be developed for marker-assisted selection, to aid the introgression of diversity from a tetraploid source into modern wheat for potential physiological trait improvement.
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spelling Identification of quantitative trait loci relating to flowering time, flag leaf and awn characteristics in a novel triticum dicoccum mapping populationWheatPhysiologyGenetic diversitySNP genotypingTetraploid landracesQTL mappingTritcum dicoccumTetraploid landraces of wheat harbour genetic diversity that could be introgressed into modern bread wheat with the aid of marker-assisted selection to address the genetic diversity bottleneck in the breeding genepool. A novel bi-parental Triticum turgidum ssp. dicoccum Schrank mapping population was created from a cross between two landrace accessions differing for multiple physiological traits. The population was phenotyped for traits hypothesised to be proxies for characteristics associated with improved photosynthesis or drought tolerance, including flowering time, awn length, flag leaf length and width, and stomatal and trichome density. The mapping individuals and parents were genotyped with the 35K Wheat Breeders' single nucleotide polymorphism (SNP) array. A genetic linkage map was constructed from 104 F4 individuals, consisting of 2066 SNPs with a total length of 3295 cM and an average spacing of 1.6 cM. Using the population, 10 quantitative trait loci (QTLs) for five traits were identified in two years of trials. Three consistent QTLs were identified over both trials for awn length, flowering time and flag leaf width, on chromosomes 4A, 7B and 5B, respectively. The awn length and flowering time QTLs correspond with the major loci Hd and Vrn-B3, respectively. The identified marker-trait associations could be developed for marker-assisted selection, to aid the introgression of diversity from a tetraploid source into modern wheat for potential physiological trait improvement.MDPISapientiaWright, Tally I.C.Burnett, Angela C.Griffiths, HowardKadner, MaximePowell, James S.Oliveira, Hugo R.Leigh, Fiona J.2020-09-16T10:28:23Z20202020-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.1/14725eng2223-774710.3390/plants9070829info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-24T10:27:03Zoai:sapientia.ualg.pt:10400.1/14725Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T20:05:42.846331Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Identification of quantitative trait loci relating to flowering time, flag leaf and awn characteristics in a novel triticum dicoccum mapping population
title Identification of quantitative trait loci relating to flowering time, flag leaf and awn characteristics in a novel triticum dicoccum mapping population
spellingShingle Identification of quantitative trait loci relating to flowering time, flag leaf and awn characteristics in a novel triticum dicoccum mapping population
Wright, Tally I.C.
Wheat
Physiology
Genetic diversity
SNP genotyping
Tetraploid landraces
QTL mapping
Tritcum dicoccum
title_short Identification of quantitative trait loci relating to flowering time, flag leaf and awn characteristics in a novel triticum dicoccum mapping population
title_full Identification of quantitative trait loci relating to flowering time, flag leaf and awn characteristics in a novel triticum dicoccum mapping population
title_fullStr Identification of quantitative trait loci relating to flowering time, flag leaf and awn characteristics in a novel triticum dicoccum mapping population
title_full_unstemmed Identification of quantitative trait loci relating to flowering time, flag leaf and awn characteristics in a novel triticum dicoccum mapping population
title_sort Identification of quantitative trait loci relating to flowering time, flag leaf and awn characteristics in a novel triticum dicoccum mapping population
author Wright, Tally I.C.
author_facet Wright, Tally I.C.
Burnett, Angela C.
Griffiths, Howard
Kadner, Maxime
Powell, James S.
Oliveira, Hugo R.
Leigh, Fiona J.
author_role author
author2 Burnett, Angela C.
Griffiths, Howard
Kadner, Maxime
Powell, James S.
Oliveira, Hugo R.
Leigh, Fiona J.
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv Sapientia
dc.contributor.author.fl_str_mv Wright, Tally I.C.
Burnett, Angela C.
Griffiths, Howard
Kadner, Maxime
Powell, James S.
Oliveira, Hugo R.
Leigh, Fiona J.
dc.subject.por.fl_str_mv Wheat
Physiology
Genetic diversity
SNP genotyping
Tetraploid landraces
QTL mapping
Tritcum dicoccum
topic Wheat
Physiology
Genetic diversity
SNP genotyping
Tetraploid landraces
QTL mapping
Tritcum dicoccum
description Tetraploid landraces of wheat harbour genetic diversity that could be introgressed into modern bread wheat with the aid of marker-assisted selection to address the genetic diversity bottleneck in the breeding genepool. A novel bi-parental Triticum turgidum ssp. dicoccum Schrank mapping population was created from a cross between two landrace accessions differing for multiple physiological traits. The population was phenotyped for traits hypothesised to be proxies for characteristics associated with improved photosynthesis or drought tolerance, including flowering time, awn length, flag leaf length and width, and stomatal and trichome density. The mapping individuals and parents were genotyped with the 35K Wheat Breeders' single nucleotide polymorphism (SNP) array. A genetic linkage map was constructed from 104 F4 individuals, consisting of 2066 SNPs with a total length of 3295 cM and an average spacing of 1.6 cM. Using the population, 10 quantitative trait loci (QTLs) for five traits were identified in two years of trials. Three consistent QTLs were identified over both trials for awn length, flowering time and flag leaf width, on chromosomes 4A, 7B and 5B, respectively. The awn length and flowering time QTLs correspond with the major loci Hd and Vrn-B3, respectively. The identified marker-trait associations could be developed for marker-assisted selection, to aid the introgression of diversity from a tetraploid source into modern wheat for potential physiological trait improvement.
publishDate 2020
dc.date.none.fl_str_mv 2020-09-16T10:28:23Z
2020
2020-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.1/14725
url http://hdl.handle.net/10400.1/14725
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 2223-7747
10.3390/plants9070829
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dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv MDPI
publisher.none.fl_str_mv MDPI
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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