Alzheimer's diagnosis using deep learning in segmenting and classifying 3D brain MR images

Detalhes bibliográficos
Autor(a) principal: Tran Anh Tuan
Data de Publicação: 2020
Outros Autores: Teh Bao Pham, Jin Young Kim, João Manuel R. S. Tavares
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: https://hdl.handle.net/10216/141916
Resumo: Background and objectives Dementia is one of the brain diseases with serious symptoms such as memory loss, and thinking problems. According to the World Alzheimer Report 2016, in the world, there are 47 million people having dementia and it can be 131 million by 2050. There is no standard method to diagnose dementia, and consequently unable to access the treatment effectively. Hence, the computational diagnosis of the disease from brain Magnetic Resonance Image (MRI) scans plays an important role in supporting the early diagnosis. Alzheimer's Disease (AD), a common type of Dementia, includes problems related to disorientation, mood swings, not managing self-care, and behavioral issues. In this article, we present a new computational method to diagnosis Alzheimer's disease from 3D brain MR images. Methods An efficient approach to diagnosis Alzheimer's disease from brain MRI scans is proposed comprising two phases: I) segmentation and II) classification, both based on deep learning. After the brain tissues are segmented by a model that combines Gaussian Mixture Model (GMM) and Convolutional Neural Network (CNN), a new model combining Extreme Gradient Boosting (XGBoost) and Support Vector Machine (SVM) is used to classify Alzheimer's disease based on the segmented tissues. Results We present two evaluations for segmentation and classification. For comparison, the new method was evaluated using the AD-86 and AD-126 datasets leading to Dice 0.96 for segmentation in both datasets and accuracies 0.88, and 0.80 for classification, respectively. Conclusion Deep learning gives prominent results for segmentation and feature extraction in medical image processing. The combination of XGboost and SVM improves the results obtained.
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spelling Alzheimer's diagnosis using deep learning in segmenting and classifying 3D brain MR imagesCiências Tecnológicas, Ciências médicas e da saúdeTechnological sciences, Medical and Health sciencesBackground and objectives Dementia is one of the brain diseases with serious symptoms such as memory loss, and thinking problems. According to the World Alzheimer Report 2016, in the world, there are 47 million people having dementia and it can be 131 million by 2050. There is no standard method to diagnose dementia, and consequently unable to access the treatment effectively. Hence, the computational diagnosis of the disease from brain Magnetic Resonance Image (MRI) scans plays an important role in supporting the early diagnosis. Alzheimer's Disease (AD), a common type of Dementia, includes problems related to disorientation, mood swings, not managing self-care, and behavioral issues. In this article, we present a new computational method to diagnosis Alzheimer's disease from 3D brain MR images. Methods An efficient approach to diagnosis Alzheimer's disease from brain MRI scans is proposed comprising two phases: I) segmentation and II) classification, both based on deep learning. After the brain tissues are segmented by a model that combines Gaussian Mixture Model (GMM) and Convolutional Neural Network (CNN), a new model combining Extreme Gradient Boosting (XGBoost) and Support Vector Machine (SVM) is used to classify Alzheimer's disease based on the segmented tissues. Results We present two evaluations for segmentation and classification. For comparison, the new method was evaluated using the AD-86 and AD-126 datasets leading to Dice 0.96 for segmentation in both datasets and accuracies 0.88, and 0.80 for classification, respectively. Conclusion Deep learning gives prominent results for segmentation and feature extraction in medical image processing. The combination of XGboost and SVM improves the results obtained.2020-072020-07-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleimage/pngapplication/pdfhttps://hdl.handle.net/10216/141916eng0020-745410.1080/00207454.2020.1835900Tran Anh TuanTeh Bao PhamJin Young KimJoão Manuel R. S. Tavaresinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-11-29T15:01:00Zoai:repositorio-aberto.up.pt:10216/141916Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T00:13:43.982049Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Alzheimer's diagnosis using deep learning in segmenting and classifying 3D brain MR images
title Alzheimer's diagnosis using deep learning in segmenting and classifying 3D brain MR images
spellingShingle Alzheimer's diagnosis using deep learning in segmenting and classifying 3D brain MR images
Tran Anh Tuan
Ciências Tecnológicas, Ciências médicas e da saúde
Technological sciences, Medical and Health sciences
title_short Alzheimer's diagnosis using deep learning in segmenting and classifying 3D brain MR images
title_full Alzheimer's diagnosis using deep learning in segmenting and classifying 3D brain MR images
title_fullStr Alzheimer's diagnosis using deep learning in segmenting and classifying 3D brain MR images
title_full_unstemmed Alzheimer's diagnosis using deep learning in segmenting and classifying 3D brain MR images
title_sort Alzheimer's diagnosis using deep learning in segmenting and classifying 3D brain MR images
author Tran Anh Tuan
author_facet Tran Anh Tuan
Teh Bao Pham
Jin Young Kim
João Manuel R. S. Tavares
author_role author
author2 Teh Bao Pham
Jin Young Kim
João Manuel R. S. Tavares
author2_role author
author
author
dc.contributor.author.fl_str_mv Tran Anh Tuan
Teh Bao Pham
Jin Young Kim
João Manuel R. S. Tavares
dc.subject.por.fl_str_mv Ciências Tecnológicas, Ciências médicas e da saúde
Technological sciences, Medical and Health sciences
topic Ciências Tecnológicas, Ciências médicas e da saúde
Technological sciences, Medical and Health sciences
description Background and objectives Dementia is one of the brain diseases with serious symptoms such as memory loss, and thinking problems. According to the World Alzheimer Report 2016, in the world, there are 47 million people having dementia and it can be 131 million by 2050. There is no standard method to diagnose dementia, and consequently unable to access the treatment effectively. Hence, the computational diagnosis of the disease from brain Magnetic Resonance Image (MRI) scans plays an important role in supporting the early diagnosis. Alzheimer's Disease (AD), a common type of Dementia, includes problems related to disorientation, mood swings, not managing self-care, and behavioral issues. In this article, we present a new computational method to diagnosis Alzheimer's disease from 3D brain MR images. Methods An efficient approach to diagnosis Alzheimer's disease from brain MRI scans is proposed comprising two phases: I) segmentation and II) classification, both based on deep learning. After the brain tissues are segmented by a model that combines Gaussian Mixture Model (GMM) and Convolutional Neural Network (CNN), a new model combining Extreme Gradient Boosting (XGBoost) and Support Vector Machine (SVM) is used to classify Alzheimer's disease based on the segmented tissues. Results We present two evaluations for segmentation and classification. For comparison, the new method was evaluated using the AD-86 and AD-126 datasets leading to Dice 0.96 for segmentation in both datasets and accuracies 0.88, and 0.80 for classification, respectively. Conclusion Deep learning gives prominent results for segmentation and feature extraction in medical image processing. The combination of XGboost and SVM improves the results obtained.
publishDate 2020
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2020-07-01T00:00:00Z
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