Determinants of the Sympatric Host-Pathogen Relationship in Tuberculosis

Detalhes bibliográficos
Autor(a) principal: David, Susana
Data de Publicação: 2015
Outros Autores: Mateus, A. R. A., Duarte, Elsa L., Albuquerque, José, Portugal, Clara, Sancho, Luísa, Lavinha, João, Gonçalves, Guilherme
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.7/497
Resumo: Major contributions from pathogen genome analysis and host genetics have equated the possibility of Mycobacterium tuberculosis co-evolution with its human host leading to more stable sympatric host-pathogen relationships. However, the attribution to either sympatric or allopatric categories depends on the resolution or grain of genotypic characterization. We explored the influence on the sympatric host-pathogen relationship of clinical (HIV infection and multidrug-resistant tuberculosis [MDRTB]) and demographic (gender and age) factors in regards to the genotypic grain by using spacer oligonucleotide typing (spoligotyping) for classification of M. tuberculosis strains within the Euro-American lineage. We analyzed a total of 547 tuberculosis (TB) cases, from six year consecutive sampling in a setting with high TB-HIV coinfection (32.0%). Of these, 62.0% were caused by major circulating pathogen genotypes. The sympatric relationship was defined according to spoligotype in comparison to the international spoligotype database SpolDB4. While no significant association with Euro-American lineage was observed with any of the factors analyzed, increasing the resolution with spoligotyping evidenced a significant association of MDRTB with sympatric strains, regardless of the HIV status. Furthermore, distribution curves of the prevalence of sympatric and allopatric TB in relation to patients' age showed an accentuation of the relevance of the age of onset in the allopatric relationship, as reflected in the trimodal distribution. On the contrary, sympatric TB was characterized by the tendency towards a typical (standard) distribution curve. Our results suggest that within the Euro-American lineage a greater degree of genotyping fine-tuning is necessary in modeling the biological processes behind the host-pathogen interplay. Furthermore, prevalence distribution of sympatric TB to age was suggestive of host genetic determinisms driven by more common variants.
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spelling Determinants of the Sympatric Host-Pathogen Relationship in TuberculosisTuberculosisMycobacterium tuberculosisHost-pathogen interactionsHIV infectionsPhylogeographyAge groupsHIVPortugalMajor contributions from pathogen genome analysis and host genetics have equated the possibility of Mycobacterium tuberculosis co-evolution with its human host leading to more stable sympatric host-pathogen relationships. However, the attribution to either sympatric or allopatric categories depends on the resolution or grain of genotypic characterization. We explored the influence on the sympatric host-pathogen relationship of clinical (HIV infection and multidrug-resistant tuberculosis [MDRTB]) and demographic (gender and age) factors in regards to the genotypic grain by using spacer oligonucleotide typing (spoligotyping) for classification of M. tuberculosis strains within the Euro-American lineage. We analyzed a total of 547 tuberculosis (TB) cases, from six year consecutive sampling in a setting with high TB-HIV coinfection (32.0%). Of these, 62.0% were caused by major circulating pathogen genotypes. The sympatric relationship was defined according to spoligotype in comparison to the international spoligotype database SpolDB4. While no significant association with Euro-American lineage was observed with any of the factors analyzed, increasing the resolution with spoligotyping evidenced a significant association of MDRTB with sympatric strains, regardless of the HIV status. Furthermore, distribution curves of the prevalence of sympatric and allopatric TB in relation to patients' age showed an accentuation of the relevance of the age of onset in the allopatric relationship, as reflected in the trimodal distribution. On the contrary, sympatric TB was characterized by the tendency towards a typical (standard) distribution curve. Our results suggest that within the Euro-American lineage a greater degree of genotyping fine-tuning is necessary in modeling the biological processes behind the host-pathogen interplay. Furthermore, prevalence distribution of sympatric TB to age was suggestive of host genetic determinisms driven by more common variants.Luso-American Development Foundation: (LACR Award program - 2007), European Community fund: (FEDER).PLOSARCADavid, SusanaMateus, A. R. A.Duarte, Elsa L.Albuquerque, JoséPortugal, ClaraSancho, LuísaLavinha, JoãoGonçalves, Guilherme2015-11-17T15:25:27Z2015-11-032015-11-03T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.7/497engDavid S, Mateus ARA, Duarte EL, Albuquerque J, Portugal C, Sancho L, et al. (2015) Determinants of the Sympatric Host-Pathogen Relationship in Tuberculosis. PLoS ONE 10(11): e0140625. doi:10.1371/journal.pone.014062510.1371/journal.pone.0140625info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2022-11-29T14:34:52Zoai:arca.igc.gulbenkian.pt:10400.7/497Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T16:11:46.157483Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Determinants of the Sympatric Host-Pathogen Relationship in Tuberculosis
title Determinants of the Sympatric Host-Pathogen Relationship in Tuberculosis
spellingShingle Determinants of the Sympatric Host-Pathogen Relationship in Tuberculosis
David, Susana
Tuberculosis
Mycobacterium tuberculosis
Host-pathogen interactions
HIV infections
Phylogeography
Age groups
HIV
Portugal
title_short Determinants of the Sympatric Host-Pathogen Relationship in Tuberculosis
title_full Determinants of the Sympatric Host-Pathogen Relationship in Tuberculosis
title_fullStr Determinants of the Sympatric Host-Pathogen Relationship in Tuberculosis
title_full_unstemmed Determinants of the Sympatric Host-Pathogen Relationship in Tuberculosis
title_sort Determinants of the Sympatric Host-Pathogen Relationship in Tuberculosis
author David, Susana
author_facet David, Susana
Mateus, A. R. A.
Duarte, Elsa L.
Albuquerque, José
Portugal, Clara
Sancho, Luísa
Lavinha, João
Gonçalves, Guilherme
author_role author
author2 Mateus, A. R. A.
Duarte, Elsa L.
Albuquerque, José
Portugal, Clara
Sancho, Luísa
Lavinha, João
Gonçalves, Guilherme
author2_role author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv ARCA
dc.contributor.author.fl_str_mv David, Susana
Mateus, A. R. A.
Duarte, Elsa L.
Albuquerque, José
Portugal, Clara
Sancho, Luísa
Lavinha, João
Gonçalves, Guilherme
dc.subject.por.fl_str_mv Tuberculosis
Mycobacterium tuberculosis
Host-pathogen interactions
HIV infections
Phylogeography
Age groups
HIV
Portugal
topic Tuberculosis
Mycobacterium tuberculosis
Host-pathogen interactions
HIV infections
Phylogeography
Age groups
HIV
Portugal
description Major contributions from pathogen genome analysis and host genetics have equated the possibility of Mycobacterium tuberculosis co-evolution with its human host leading to more stable sympatric host-pathogen relationships. However, the attribution to either sympatric or allopatric categories depends on the resolution or grain of genotypic characterization. We explored the influence on the sympatric host-pathogen relationship of clinical (HIV infection and multidrug-resistant tuberculosis [MDRTB]) and demographic (gender and age) factors in regards to the genotypic grain by using spacer oligonucleotide typing (spoligotyping) for classification of M. tuberculosis strains within the Euro-American lineage. We analyzed a total of 547 tuberculosis (TB) cases, from six year consecutive sampling in a setting with high TB-HIV coinfection (32.0%). Of these, 62.0% were caused by major circulating pathogen genotypes. The sympatric relationship was defined according to spoligotype in comparison to the international spoligotype database SpolDB4. While no significant association with Euro-American lineage was observed with any of the factors analyzed, increasing the resolution with spoligotyping evidenced a significant association of MDRTB with sympatric strains, regardless of the HIV status. Furthermore, distribution curves of the prevalence of sympatric and allopatric TB in relation to patients' age showed an accentuation of the relevance of the age of onset in the allopatric relationship, as reflected in the trimodal distribution. On the contrary, sympatric TB was characterized by the tendency towards a typical (standard) distribution curve. Our results suggest that within the Euro-American lineage a greater degree of genotyping fine-tuning is necessary in modeling the biological processes behind the host-pathogen interplay. Furthermore, prevalence distribution of sympatric TB to age was suggestive of host genetic determinisms driven by more common variants.
publishDate 2015
dc.date.none.fl_str_mv 2015-11-17T15:25:27Z
2015-11-03
2015-11-03T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.7/497
url http://hdl.handle.net/10400.7/497
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv David S, Mateus ARA, Duarte EL, Albuquerque J, Portugal C, Sancho L, et al. (2015) Determinants of the Sympatric Host-Pathogen Relationship in Tuberculosis. PLoS ONE 10(11): e0140625. doi:10.1371/journal.pone.0140625
10.1371/journal.pone.0140625
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
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dc.publisher.none.fl_str_mv PLOS
publisher.none.fl_str_mv PLOS
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collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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