Determinants of the Sympatric Host-Pathogen Relationship in Tuberculosis
Autor(a) principal: | |
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Data de Publicação: | 2015 |
Outros Autores: | , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10400.7/497 |
Resumo: | Major contributions from pathogen genome analysis and host genetics have equated the possibility of Mycobacterium tuberculosis co-evolution with its human host leading to more stable sympatric host-pathogen relationships. However, the attribution to either sympatric or allopatric categories depends on the resolution or grain of genotypic characterization. We explored the influence on the sympatric host-pathogen relationship of clinical (HIV infection and multidrug-resistant tuberculosis [MDRTB]) and demographic (gender and age) factors in regards to the genotypic grain by using spacer oligonucleotide typing (spoligotyping) for classification of M. tuberculosis strains within the Euro-American lineage. We analyzed a total of 547 tuberculosis (TB) cases, from six year consecutive sampling in a setting with high TB-HIV coinfection (32.0%). Of these, 62.0% were caused by major circulating pathogen genotypes. The sympatric relationship was defined according to spoligotype in comparison to the international spoligotype database SpolDB4. While no significant association with Euro-American lineage was observed with any of the factors analyzed, increasing the resolution with spoligotyping evidenced a significant association of MDRTB with sympatric strains, regardless of the HIV status. Furthermore, distribution curves of the prevalence of sympatric and allopatric TB in relation to patients' age showed an accentuation of the relevance of the age of onset in the allopatric relationship, as reflected in the trimodal distribution. On the contrary, sympatric TB was characterized by the tendency towards a typical (standard) distribution curve. Our results suggest that within the Euro-American lineage a greater degree of genotyping fine-tuning is necessary in modeling the biological processes behind the host-pathogen interplay. Furthermore, prevalence distribution of sympatric TB to age was suggestive of host genetic determinisms driven by more common variants. |
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Determinants of the Sympatric Host-Pathogen Relationship in TuberculosisTuberculosisMycobacterium tuberculosisHost-pathogen interactionsHIV infectionsPhylogeographyAge groupsHIVPortugalMajor contributions from pathogen genome analysis and host genetics have equated the possibility of Mycobacterium tuberculosis co-evolution with its human host leading to more stable sympatric host-pathogen relationships. However, the attribution to either sympatric or allopatric categories depends on the resolution or grain of genotypic characterization. We explored the influence on the sympatric host-pathogen relationship of clinical (HIV infection and multidrug-resistant tuberculosis [MDRTB]) and demographic (gender and age) factors in regards to the genotypic grain by using spacer oligonucleotide typing (spoligotyping) for classification of M. tuberculosis strains within the Euro-American lineage. We analyzed a total of 547 tuberculosis (TB) cases, from six year consecutive sampling in a setting with high TB-HIV coinfection (32.0%). Of these, 62.0% were caused by major circulating pathogen genotypes. The sympatric relationship was defined according to spoligotype in comparison to the international spoligotype database SpolDB4. While no significant association with Euro-American lineage was observed with any of the factors analyzed, increasing the resolution with spoligotyping evidenced a significant association of MDRTB with sympatric strains, regardless of the HIV status. Furthermore, distribution curves of the prevalence of sympatric and allopatric TB in relation to patients' age showed an accentuation of the relevance of the age of onset in the allopatric relationship, as reflected in the trimodal distribution. On the contrary, sympatric TB was characterized by the tendency towards a typical (standard) distribution curve. Our results suggest that within the Euro-American lineage a greater degree of genotyping fine-tuning is necessary in modeling the biological processes behind the host-pathogen interplay. Furthermore, prevalence distribution of sympatric TB to age was suggestive of host genetic determinisms driven by more common variants.Luso-American Development Foundation: (LACR Award program - 2007), European Community fund: (FEDER).PLOSARCADavid, SusanaMateus, A. R. A.Duarte, Elsa L.Albuquerque, JoséPortugal, ClaraSancho, LuísaLavinha, JoãoGonçalves, Guilherme2015-11-17T15:25:27Z2015-11-032015-11-03T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.7/497engDavid S, Mateus ARA, Duarte EL, Albuquerque J, Portugal C, Sancho L, et al. (2015) Determinants of the Sympatric Host-Pathogen Relationship in Tuberculosis. PLoS ONE 10(11): e0140625. doi:10.1371/journal.pone.014062510.1371/journal.pone.0140625info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2022-11-29T14:34:52Zoai:arca.igc.gulbenkian.pt:10400.7/497Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T16:11:46.157483Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Determinants of the Sympatric Host-Pathogen Relationship in Tuberculosis |
title |
Determinants of the Sympatric Host-Pathogen Relationship in Tuberculosis |
spellingShingle |
Determinants of the Sympatric Host-Pathogen Relationship in Tuberculosis David, Susana Tuberculosis Mycobacterium tuberculosis Host-pathogen interactions HIV infections Phylogeography Age groups HIV Portugal |
title_short |
Determinants of the Sympatric Host-Pathogen Relationship in Tuberculosis |
title_full |
Determinants of the Sympatric Host-Pathogen Relationship in Tuberculosis |
title_fullStr |
Determinants of the Sympatric Host-Pathogen Relationship in Tuberculosis |
title_full_unstemmed |
Determinants of the Sympatric Host-Pathogen Relationship in Tuberculosis |
title_sort |
Determinants of the Sympatric Host-Pathogen Relationship in Tuberculosis |
author |
David, Susana |
author_facet |
David, Susana Mateus, A. R. A. Duarte, Elsa L. Albuquerque, José Portugal, Clara Sancho, Luísa Lavinha, João Gonçalves, Guilherme |
author_role |
author |
author2 |
Mateus, A. R. A. Duarte, Elsa L. Albuquerque, José Portugal, Clara Sancho, Luísa Lavinha, João Gonçalves, Guilherme |
author2_role |
author author author author author author author |
dc.contributor.none.fl_str_mv |
ARCA |
dc.contributor.author.fl_str_mv |
David, Susana Mateus, A. R. A. Duarte, Elsa L. Albuquerque, José Portugal, Clara Sancho, Luísa Lavinha, João Gonçalves, Guilherme |
dc.subject.por.fl_str_mv |
Tuberculosis Mycobacterium tuberculosis Host-pathogen interactions HIV infections Phylogeography Age groups HIV Portugal |
topic |
Tuberculosis Mycobacterium tuberculosis Host-pathogen interactions HIV infections Phylogeography Age groups HIV Portugal |
description |
Major contributions from pathogen genome analysis and host genetics have equated the possibility of Mycobacterium tuberculosis co-evolution with its human host leading to more stable sympatric host-pathogen relationships. However, the attribution to either sympatric or allopatric categories depends on the resolution or grain of genotypic characterization. We explored the influence on the sympatric host-pathogen relationship of clinical (HIV infection and multidrug-resistant tuberculosis [MDRTB]) and demographic (gender and age) factors in regards to the genotypic grain by using spacer oligonucleotide typing (spoligotyping) for classification of M. tuberculosis strains within the Euro-American lineage. We analyzed a total of 547 tuberculosis (TB) cases, from six year consecutive sampling in a setting with high TB-HIV coinfection (32.0%). Of these, 62.0% were caused by major circulating pathogen genotypes. The sympatric relationship was defined according to spoligotype in comparison to the international spoligotype database SpolDB4. While no significant association with Euro-American lineage was observed with any of the factors analyzed, increasing the resolution with spoligotyping evidenced a significant association of MDRTB with sympatric strains, regardless of the HIV status. Furthermore, distribution curves of the prevalence of sympatric and allopatric TB in relation to patients' age showed an accentuation of the relevance of the age of onset in the allopatric relationship, as reflected in the trimodal distribution. On the contrary, sympatric TB was characterized by the tendency towards a typical (standard) distribution curve. Our results suggest that within the Euro-American lineage a greater degree of genotyping fine-tuning is necessary in modeling the biological processes behind the host-pathogen interplay. Furthermore, prevalence distribution of sympatric TB to age was suggestive of host genetic determinisms driven by more common variants. |
publishDate |
2015 |
dc.date.none.fl_str_mv |
2015-11-17T15:25:27Z 2015-11-03 2015-11-03T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10400.7/497 |
url |
http://hdl.handle.net/10400.7/497 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
David S, Mateus ARA, Duarte EL, Albuquerque J, Portugal C, Sancho L, et al. (2015) Determinants of the Sympatric Host-Pathogen Relationship in Tuberculosis. PLoS ONE 10(11): e0140625. doi:10.1371/journal.pone.0140625 10.1371/journal.pone.0140625 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
PLOS |
publisher.none.fl_str_mv |
PLOS |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
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Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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