A review of machine learning methods recently applied to FTIR spectroscopy data for the analysis of human blood cells

Detalhes bibliográficos
Autor(a) principal: Fadlelmoula, Ahmed
Data de Publicação: 2023
Outros Autores: Catarino, Susana Oliveira, Minas, Graça, Carvalho, Vítor
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: https://hdl.handle.net/1822/84865
Resumo: Machine learning (ML) is a broad term encompassing several methods that allow us to learn from data. These methods may permit large real-world databases to be more rapidly translated to applications to inform patient–provider decision-making. This paper presents a review of articles that discuss the use of Fourier transform infrared (FTIR) spectroscopy and ML for human blood analysis between the years 2019–2023. The literature review was conducted to identify published research of employed ML linked with FTIR for distinction between pathological and healthy human blood cells. The articles’ search strategy was implemented and studies meeting the eligibility criteria were evaluated. Relevant data related to the study design, statistical methods, and strengths and limitations were identified. A total of 39 publications in the last 5 years (2019–2023) were identified and evaluated for this review. Diverse methods, statistical packages, and approaches were used across the identified studies. The most common methods included support vector machine (SVM) and principal component analysis (PCA) approaches. Most studies applied internal validation and employed more than one algorithm, while only four studies applied one ML algorithm to the data. A wide variety of approaches, algorithms, statistical software, and validation strategies were employed in the application of ML methods. There is a need to ensure that multiple ML approaches are used, the model selection strategy is clearly defined, and both internal and external validation are necessary to be sure that the discrimination of human blood cells is being made with the highest efficient evidence.
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spelling A review of machine learning methods recently applied to FTIR spectroscopy data for the analysis of human blood cellsFTIR spectroscopyHuman blood cellsMachine learningReviewCiências Médicas::Biotecnologia MédicaSaúde de qualidadeMachine learning (ML) is a broad term encompassing several methods that allow us to learn from data. These methods may permit large real-world databases to be more rapidly translated to applications to inform patient–provider decision-making. This paper presents a review of articles that discuss the use of Fourier transform infrared (FTIR) spectroscopy and ML for human blood analysis between the years 2019–2023. The literature review was conducted to identify published research of employed ML linked with FTIR for distinction between pathological and healthy human blood cells. The articles’ search strategy was implemented and studies meeting the eligibility criteria were evaluated. Relevant data related to the study design, statistical methods, and strengths and limitations were identified. A total of 39 publications in the last 5 years (2019–2023) were identified and evaluated for this review. Diverse methods, statistical packages, and approaches were used across the identified studies. The most common methods included support vector machine (SVM) and principal component analysis (PCA) approaches. Most studies applied internal validation and employed more than one algorithm, while only four studies applied one ML algorithm to the data. A wide variety of approaches, algorithms, statistical software, and validation strategies were employed in the application of ML methods. There is a need to ensure that multiple ML approaches are used, the model selection strategy is clearly defined, and both internal and external validation are necessary to be sure that the discrimination of human blood cells is being made with the highest efficient evidence.FCT -Fundação para a Ciência e a Tecnologia(00215)MDPIUniversidade do MinhoFadlelmoula, AhmedCatarino, Susana OliveiraMinas, GraçaCarvalho, Vítor2023-05-292023-05-29T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttps://hdl.handle.net/1822/84865engFadlelmoula, A.; Catarino, S.O.; Minas, G.; Carvalho, V. A review of machine learning methods recently applied to FTIR spectroscopy data for the analysis of human blood cells. Micromachines 2023, 14, 1145. https://doi.org/10.3390/mi1406114510.3390/mi140611451145https://www.mdpi.com/2072-666X/14/6/1145info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-08-12T01:17:54Zoai:repositorium.sdum.uminho.pt:1822/84865Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:48:49.006360Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv A review of machine learning methods recently applied to FTIR spectroscopy data for the analysis of human blood cells
title A review of machine learning methods recently applied to FTIR spectroscopy data for the analysis of human blood cells
spellingShingle A review of machine learning methods recently applied to FTIR spectroscopy data for the analysis of human blood cells
Fadlelmoula, Ahmed
FTIR spectroscopy
Human blood cells
Machine learning
Review
Ciências Médicas::Biotecnologia Médica
Saúde de qualidade
title_short A review of machine learning methods recently applied to FTIR spectroscopy data for the analysis of human blood cells
title_full A review of machine learning methods recently applied to FTIR spectroscopy data for the analysis of human blood cells
title_fullStr A review of machine learning methods recently applied to FTIR spectroscopy data for the analysis of human blood cells
title_full_unstemmed A review of machine learning methods recently applied to FTIR spectroscopy data for the analysis of human blood cells
title_sort A review of machine learning methods recently applied to FTIR spectroscopy data for the analysis of human blood cells
author Fadlelmoula, Ahmed
author_facet Fadlelmoula, Ahmed
Catarino, Susana Oliveira
Minas, Graça
Carvalho, Vítor
author_role author
author2 Catarino, Susana Oliveira
Minas, Graça
Carvalho, Vítor
author2_role author
author
author
dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv Fadlelmoula, Ahmed
Catarino, Susana Oliveira
Minas, Graça
Carvalho, Vítor
dc.subject.por.fl_str_mv FTIR spectroscopy
Human blood cells
Machine learning
Review
Ciências Médicas::Biotecnologia Médica
Saúde de qualidade
topic FTIR spectroscopy
Human blood cells
Machine learning
Review
Ciências Médicas::Biotecnologia Médica
Saúde de qualidade
description Machine learning (ML) is a broad term encompassing several methods that allow us to learn from data. These methods may permit large real-world databases to be more rapidly translated to applications to inform patient–provider decision-making. This paper presents a review of articles that discuss the use of Fourier transform infrared (FTIR) spectroscopy and ML for human blood analysis between the years 2019–2023. The literature review was conducted to identify published research of employed ML linked with FTIR for distinction between pathological and healthy human blood cells. The articles’ search strategy was implemented and studies meeting the eligibility criteria were evaluated. Relevant data related to the study design, statistical methods, and strengths and limitations were identified. A total of 39 publications in the last 5 years (2019–2023) were identified and evaluated for this review. Diverse methods, statistical packages, and approaches were used across the identified studies. The most common methods included support vector machine (SVM) and principal component analysis (PCA) approaches. Most studies applied internal validation and employed more than one algorithm, while only four studies applied one ML algorithm to the data. A wide variety of approaches, algorithms, statistical software, and validation strategies were employed in the application of ML methods. There is a need to ensure that multiple ML approaches are used, the model selection strategy is clearly defined, and both internal and external validation are necessary to be sure that the discrimination of human blood cells is being made with the highest efficient evidence.
publishDate 2023
dc.date.none.fl_str_mv 2023-05-29
2023-05-29T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://hdl.handle.net/1822/84865
url https://hdl.handle.net/1822/84865
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Fadlelmoula, A.; Catarino, S.O.; Minas, G.; Carvalho, V. A review of machine learning methods recently applied to FTIR spectroscopy data for the analysis of human blood cells. Micromachines 2023, 14, 1145. https://doi.org/10.3390/mi14061145
10.3390/mi14061145
1145
https://www.mdpi.com/2072-666X/14/6/1145
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
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dc.publisher.none.fl_str_mv MDPI
publisher.none.fl_str_mv MDPI
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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