Population structure, adaptation and divergence of the meadow spittlebug, Philaenus spumarius (Hemiptera, Aphrophoridae), revealed by genomic and morphological data
Autor(a) principal: | |
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Data de Publicação: | 2021 |
Outros Autores: | , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10400.3/6189 |
Resumo: | Understanding patterns of population differentiation and gene flow in insect vectors of plant diseases is crucial for the implementation of management programs of disease. We investigated morphological and genome-wide variation across the distribution range of the spittlebug Philaenus spumarius (Linnaeus, 1758) (Hemiptera, Auchenorrhyncha, Aphrophoridae), presently the most important vector of the plant pathogenic bacterium Xylella fastidiosa Wells et al., 1987 in Europe. We found genome-wide divergence between P. spumarius and a very closely related species, P. tesselatus Melichar, 1899, at RAD sequencing markers. The two species may be identified by the morphology of male genitalia but are not differentiated at mitochondrial COI, making DNA barcoding with this gene ineffective. This highlights the importance of using integrative approaches in taxonomy. We detected admixture between P. tesselatus from Morocco and P. spumarius from the Iberian Peninsula, suggesting gene-flow between them. Within P. spumarius, we found a pattern of isolation-by-distance in European populations, likely acting alongside other factors restricting gene flow. Varying levels of co-occurrence of different lineages, showing heterogeneous levels of admixture, suggest other isolation mechanisms. The transatlantic populations of North America and Azores were genetically closer to the British population analyzed here, suggesting an origin from North-Western Europe, as already detected with mitochondrial DNA. Nevertheless, these may have been produced through different colonization events. We detected SNPs with signatures of positive selection associated with environmental variables, especially related to extremes and range variation in temperature and precipitation. The population genomics approach provided new insights into the patterns of divergence, gene flow and adaptation in these spittlebugs and led to several hypotheses that require further local investigation. |
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Population structure, adaptation and divergence of the meadow spittlebug, Philaenus spumarius (Hemiptera, Aphrophoridae), revealed by genomic and morphological dataAedeagusPhilaenus spumariusLocal AdaptationPopulation GenomicsRAD SequencingSpecies DivergenceUnderstanding patterns of population differentiation and gene flow in insect vectors of plant diseases is crucial for the implementation of management programs of disease. We investigated morphological and genome-wide variation across the distribution range of the spittlebug Philaenus spumarius (Linnaeus, 1758) (Hemiptera, Auchenorrhyncha, Aphrophoridae), presently the most important vector of the plant pathogenic bacterium Xylella fastidiosa Wells et al., 1987 in Europe. We found genome-wide divergence between P. spumarius and a very closely related species, P. tesselatus Melichar, 1899, at RAD sequencing markers. The two species may be identified by the morphology of male genitalia but are not differentiated at mitochondrial COI, making DNA barcoding with this gene ineffective. This highlights the importance of using integrative approaches in taxonomy. We detected admixture between P. tesselatus from Morocco and P. spumarius from the Iberian Peninsula, suggesting gene-flow between them. Within P. spumarius, we found a pattern of isolation-by-distance in European populations, likely acting alongside other factors restricting gene flow. Varying levels of co-occurrence of different lineages, showing heterogeneous levels of admixture, suggest other isolation mechanisms. The transatlantic populations of North America and Azores were genetically closer to the British population analyzed here, suggesting an origin from North-Western Europe, as already detected with mitochondrial DNA. Nevertheless, these may have been produced through different colonization events. We detected SNPs with signatures of positive selection associated with environmental variables, especially related to extremes and range variation in temperature and precipitation. The population genomics approach provided new insights into the patterns of divergence, gene flow and adaptation in these spittlebugs and led to several hypotheses that require further local investigation.This work was financially supported by Portuguese national funds through FCT-Fundacao para a Ciencia e a Tecnologia, I.P., Portugal: Project PTDC/BIA-BEC/098783/2008; Project FCTPTDC/BIA-BEC/100182/2008; Grant SFRH/BPD/26365/2006 (to Sofia G Seabra); Grant SFRH/BD/73879/2010 (to Ana SB Rodrigues); Contrato de Trabalho Norma Transitoria - DL57/2016/CP1479/(to Sofia G Seabra); cE3c Unit FCT funding in the frame of the project UIDB/00329/2020; CESAM funding UIDP/50017/2020 + UIDB/50017/2020-POCI-01-0145-FEDER-007638; PIDDAC; co-funding by the FEDER, within the PT2020 Partnership Agreement and Compete 2020. There was no additional external funding received for this study. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.PeerJRepositório da Universidade dos AçoresSeabra, Sofia G.Rodrigues, Ana S. B.Silva, Sara E.Neto, Ana CarinaPina-Martins, FranciscoMarabuto, EduardoThompson, VintonWilson, Michael R.Yurtsever, SelçukHalkka, AnttiRebelo, Maria TeresaBorges, Paulo A. V.Quartau, José A.Jiggins, Chris D.Paulo, Octávio S.2022-02-12T17:08:32Z2021-062021-06-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.3/6189engSeabra, S.G., Rodrigues, A.S.B., Silva, S.E., Neto, A.C., Pina-Martins, F., Marabuto, E., Thompson, V., Wilson, M.R., Yurtsever, S., Halkka, A., Rebelo, M.T., Borges, P.A.V., Quartau, J.A., Jiggins, C.D. & Paulo, O.S. (2021). Population structure, adaptation and divergence of the meadow spittlebug, Philaenus spumarius (Hemiptera, Aphrophoridae), revealed by genomic and morphological data. “PeerJ”, 9, e11425. DOI: 10.7717/peerj.1142510.7717/peerj.114252167-8359PMC817691234131518000656971100005info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2022-12-20T14:34:38Zoai:repositorio.uac.pt:10400.3/6189Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T16:28:21.457706Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Population structure, adaptation and divergence of the meadow spittlebug, Philaenus spumarius (Hemiptera, Aphrophoridae), revealed by genomic and morphological data |
title |
Population structure, adaptation and divergence of the meadow spittlebug, Philaenus spumarius (Hemiptera, Aphrophoridae), revealed by genomic and morphological data |
spellingShingle |
Population structure, adaptation and divergence of the meadow spittlebug, Philaenus spumarius (Hemiptera, Aphrophoridae), revealed by genomic and morphological data Seabra, Sofia G. Aedeagus Philaenus spumarius Local Adaptation Population Genomics RAD Sequencing Species Divergence |
title_short |
Population structure, adaptation and divergence of the meadow spittlebug, Philaenus spumarius (Hemiptera, Aphrophoridae), revealed by genomic and morphological data |
title_full |
Population structure, adaptation and divergence of the meadow spittlebug, Philaenus spumarius (Hemiptera, Aphrophoridae), revealed by genomic and morphological data |
title_fullStr |
Population structure, adaptation and divergence of the meadow spittlebug, Philaenus spumarius (Hemiptera, Aphrophoridae), revealed by genomic and morphological data |
title_full_unstemmed |
Population structure, adaptation and divergence of the meadow spittlebug, Philaenus spumarius (Hemiptera, Aphrophoridae), revealed by genomic and morphological data |
title_sort |
Population structure, adaptation and divergence of the meadow spittlebug, Philaenus spumarius (Hemiptera, Aphrophoridae), revealed by genomic and morphological data |
author |
Seabra, Sofia G. |
author_facet |
Seabra, Sofia G. Rodrigues, Ana S. B. Silva, Sara E. Neto, Ana Carina Pina-Martins, Francisco Marabuto, Eduardo Thompson, Vinton Wilson, Michael R. Yurtsever, Selçuk Halkka, Antti Rebelo, Maria Teresa Borges, Paulo A. V. Quartau, José A. Jiggins, Chris D. Paulo, Octávio S. |
author_role |
author |
author2 |
Rodrigues, Ana S. B. Silva, Sara E. Neto, Ana Carina Pina-Martins, Francisco Marabuto, Eduardo Thompson, Vinton Wilson, Michael R. Yurtsever, Selçuk Halkka, Antti Rebelo, Maria Teresa Borges, Paulo A. V. Quartau, José A. Jiggins, Chris D. Paulo, Octávio S. |
author2_role |
author author author author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Repositório da Universidade dos Açores |
dc.contributor.author.fl_str_mv |
Seabra, Sofia G. Rodrigues, Ana S. B. Silva, Sara E. Neto, Ana Carina Pina-Martins, Francisco Marabuto, Eduardo Thompson, Vinton Wilson, Michael R. Yurtsever, Selçuk Halkka, Antti Rebelo, Maria Teresa Borges, Paulo A. V. Quartau, José A. Jiggins, Chris D. Paulo, Octávio S. |
dc.subject.por.fl_str_mv |
Aedeagus Philaenus spumarius Local Adaptation Population Genomics RAD Sequencing Species Divergence |
topic |
Aedeagus Philaenus spumarius Local Adaptation Population Genomics RAD Sequencing Species Divergence |
description |
Understanding patterns of population differentiation and gene flow in insect vectors of plant diseases is crucial for the implementation of management programs of disease. We investigated morphological and genome-wide variation across the distribution range of the spittlebug Philaenus spumarius (Linnaeus, 1758) (Hemiptera, Auchenorrhyncha, Aphrophoridae), presently the most important vector of the plant pathogenic bacterium Xylella fastidiosa Wells et al., 1987 in Europe. We found genome-wide divergence between P. spumarius and a very closely related species, P. tesselatus Melichar, 1899, at RAD sequencing markers. The two species may be identified by the morphology of male genitalia but are not differentiated at mitochondrial COI, making DNA barcoding with this gene ineffective. This highlights the importance of using integrative approaches in taxonomy. We detected admixture between P. tesselatus from Morocco and P. spumarius from the Iberian Peninsula, suggesting gene-flow between them. Within P. spumarius, we found a pattern of isolation-by-distance in European populations, likely acting alongside other factors restricting gene flow. Varying levels of co-occurrence of different lineages, showing heterogeneous levels of admixture, suggest other isolation mechanisms. The transatlantic populations of North America and Azores were genetically closer to the British population analyzed here, suggesting an origin from North-Western Europe, as already detected with mitochondrial DNA. Nevertheless, these may have been produced through different colonization events. We detected SNPs with signatures of positive selection associated with environmental variables, especially related to extremes and range variation in temperature and precipitation. The population genomics approach provided new insights into the patterns of divergence, gene flow and adaptation in these spittlebugs and led to several hypotheses that require further local investigation. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021-06 2021-06-01T00:00:00Z 2022-02-12T17:08:32Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10400.3/6189 |
url |
http://hdl.handle.net/10400.3/6189 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Seabra, S.G., Rodrigues, A.S.B., Silva, S.E., Neto, A.C., Pina-Martins, F., Marabuto, E., Thompson, V., Wilson, M.R., Yurtsever, S., Halkka, A., Rebelo, M.T., Borges, P.A.V., Quartau, J.A., Jiggins, C.D. & Paulo, O.S. (2021). Population structure, adaptation and divergence of the meadow spittlebug, Philaenus spumarius (Hemiptera, Aphrophoridae), revealed by genomic and morphological data. “PeerJ”, 9, e11425. DOI: 10.7717/peerj.11425 10.7717/peerj.11425 2167-8359 PMC8176912 34131518 000656971100005 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
PeerJ |
publisher.none.fl_str_mv |
PeerJ |
dc.source.none.fl_str_mv |
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Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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RCAAP |
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RCAAP |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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