Respiratory viruses in mechanically ventilated patients

Detalhes bibliográficos
Autor(a) principal: Nazareth, Raquel
Data de Publicação: 2020
Outros Autores: Chasqueira, Maria Jesus, Rodrigues, Maria Lúcia, Paulino, Carolina, Conceição, Catarina, Lêdo, Lia, Segura, Úrsula, Santos, Madalena, Messias, António, Povoa, Pedro, Paixão, Paulo
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10362/93191
Resumo: BACKGROUND: Respiratory virome is an integral part of the human microbiome and its characterization may contribute to a better understanding of the changes that arise in the disease and, consequently, influence the approach and treatment of patients with acute lower respiratory infections. The aim of this study was to evaluate the presence of respiratory viruses in the lower airways of individuals undergoing invasive mechanical ventilation, with and without acute lower respiratory infection (respectively WRI and WORI groups). METHODS: We studied 44 mini-bronchoalveolar lavage samples (collected with a double catheter, Combicath® kit) from patients with mean age in the seventh decade, 20 from WORI group and 24 from WRI group, who were hospitalized for acute respiratory failure in Intensive Care Units of two hospitals in the Lisbon area. Real-time PCR was applied to verify analyse the presence of 15 common respiratory viruses (adenovirus, human bocavirus, influenza virus A and B, repiratory syncytial virus, human parainfluenza virus types 1, 2, 3 and 4, human enterovirus, human rhinovirus, human metapneumovirus, human coronavirus group 1 (229E, NL63) and 2 (OC43, HKU1). RESULTS: Respiratory viruses were detected in six of the 20 patients in the WORI group: influenza AH3 (n = 2), parainfluenza virus 1/3 (n = 2), human rhinovirus (n = 2), respiratory syncytial virus (n = 1) and human metapneumovirus (n = 1). In the WRI group, respiratory viruses were detected in 12 of the 24 patients: influenza AH3 (n = 3), human rhinovirus (n = 3), respiratory syncytial virus (n = 3), human metapneumovirus (n = 3), human bocavirus (n = 2) and human enterovirus (n = 1). Simultaneous detection of two viruses was recorded in two samples in both groups. CONCLUSIONS: The results of this study suggest the presence of common respiratory viruses in the lower respiratory tract without causing symptomatic infection, even in carefully collected lower samples. This may have important implications on the interpretation of the results on the diagnostic setting.
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spelling Respiratory viruses in mechanically ventilated patientsa pilot studyHuman microbiomeReal-time PCRRespiratory viromeRespiratory virusesPulmonary and Respiratory MedicineSDG 3 - Good Health and Well-beingBACKGROUND: Respiratory virome is an integral part of the human microbiome and its characterization may contribute to a better understanding of the changes that arise in the disease and, consequently, influence the approach and treatment of patients with acute lower respiratory infections. The aim of this study was to evaluate the presence of respiratory viruses in the lower airways of individuals undergoing invasive mechanical ventilation, with and without acute lower respiratory infection (respectively WRI and WORI groups). METHODS: We studied 44 mini-bronchoalveolar lavage samples (collected with a double catheter, Combicath® kit) from patients with mean age in the seventh decade, 20 from WORI group and 24 from WRI group, who were hospitalized for acute respiratory failure in Intensive Care Units of two hospitals in the Lisbon area. Real-time PCR was applied to verify analyse the presence of 15 common respiratory viruses (adenovirus, human bocavirus, influenza virus A and B, repiratory syncytial virus, human parainfluenza virus types 1, 2, 3 and 4, human enterovirus, human rhinovirus, human metapneumovirus, human coronavirus group 1 (229E, NL63) and 2 (OC43, HKU1). RESULTS: Respiratory viruses were detected in six of the 20 patients in the WORI group: influenza AH3 (n = 2), parainfluenza virus 1/3 (n = 2), human rhinovirus (n = 2), respiratory syncytial virus (n = 1) and human metapneumovirus (n = 1). In the WRI group, respiratory viruses were detected in 12 of the 24 patients: influenza AH3 (n = 3), human rhinovirus (n = 3), respiratory syncytial virus (n = 3), human metapneumovirus (n = 3), human bocavirus (n = 2) and human enterovirus (n = 1). Simultaneous detection of two viruses was recorded in two samples in both groups. CONCLUSIONS: The results of this study suggest the presence of common respiratory viruses in the lower respiratory tract without causing symptomatic infection, even in carefully collected lower samples. This may have important implications on the interpretation of the results on the diagnostic setting.Centro de Estudos de Doenças Crónicas (CEDOC)NOVA Medical School|Faculdade de Ciências Médicas (NMS|FCM)RUNNazareth, RaquelChasqueira, Maria JesusRodrigues, Maria LúciaPaulino, CarolinaConceição, CatarinaLêdo, LiaSegura, ÚrsulaSantos, MadalenaMessias, AntónioPovoa, PedroPaixão, Paulo2020-02-21T23:54:34Z2020-02-132020-02-13T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article1application/pdfhttp://hdl.handle.net/10362/93191eng1471-2466PURE: 16971086https://doi.org/10.1186/s12890-020-1082-5info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-03-11T04:41:44Zoai:run.unl.pt:10362/93191Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T03:37:43.277874Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Respiratory viruses in mechanically ventilated patients
a pilot study
title Respiratory viruses in mechanically ventilated patients
spellingShingle Respiratory viruses in mechanically ventilated patients
Nazareth, Raquel
Human microbiome
Real-time PCR
Respiratory virome
Respiratory viruses
Pulmonary and Respiratory Medicine
SDG 3 - Good Health and Well-being
title_short Respiratory viruses in mechanically ventilated patients
title_full Respiratory viruses in mechanically ventilated patients
title_fullStr Respiratory viruses in mechanically ventilated patients
title_full_unstemmed Respiratory viruses in mechanically ventilated patients
title_sort Respiratory viruses in mechanically ventilated patients
author Nazareth, Raquel
author_facet Nazareth, Raquel
Chasqueira, Maria Jesus
Rodrigues, Maria Lúcia
Paulino, Carolina
Conceição, Catarina
Lêdo, Lia
Segura, Úrsula
Santos, Madalena
Messias, António
Povoa, Pedro
Paixão, Paulo
author_role author
author2 Chasqueira, Maria Jesus
Rodrigues, Maria Lúcia
Paulino, Carolina
Conceição, Catarina
Lêdo, Lia
Segura, Úrsula
Santos, Madalena
Messias, António
Povoa, Pedro
Paixão, Paulo
author2_role author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Centro de Estudos de Doenças Crónicas (CEDOC)
NOVA Medical School|Faculdade de Ciências Médicas (NMS|FCM)
RUN
dc.contributor.author.fl_str_mv Nazareth, Raquel
Chasqueira, Maria Jesus
Rodrigues, Maria Lúcia
Paulino, Carolina
Conceição, Catarina
Lêdo, Lia
Segura, Úrsula
Santos, Madalena
Messias, António
Povoa, Pedro
Paixão, Paulo
dc.subject.por.fl_str_mv Human microbiome
Real-time PCR
Respiratory virome
Respiratory viruses
Pulmonary and Respiratory Medicine
SDG 3 - Good Health and Well-being
topic Human microbiome
Real-time PCR
Respiratory virome
Respiratory viruses
Pulmonary and Respiratory Medicine
SDG 3 - Good Health and Well-being
description BACKGROUND: Respiratory virome is an integral part of the human microbiome and its characterization may contribute to a better understanding of the changes that arise in the disease and, consequently, influence the approach and treatment of patients with acute lower respiratory infections. The aim of this study was to evaluate the presence of respiratory viruses in the lower airways of individuals undergoing invasive mechanical ventilation, with and without acute lower respiratory infection (respectively WRI and WORI groups). METHODS: We studied 44 mini-bronchoalveolar lavage samples (collected with a double catheter, Combicath® kit) from patients with mean age in the seventh decade, 20 from WORI group and 24 from WRI group, who were hospitalized for acute respiratory failure in Intensive Care Units of two hospitals in the Lisbon area. Real-time PCR was applied to verify analyse the presence of 15 common respiratory viruses (adenovirus, human bocavirus, influenza virus A and B, repiratory syncytial virus, human parainfluenza virus types 1, 2, 3 and 4, human enterovirus, human rhinovirus, human metapneumovirus, human coronavirus group 1 (229E, NL63) and 2 (OC43, HKU1). RESULTS: Respiratory viruses were detected in six of the 20 patients in the WORI group: influenza AH3 (n = 2), parainfluenza virus 1/3 (n = 2), human rhinovirus (n = 2), respiratory syncytial virus (n = 1) and human metapneumovirus (n = 1). In the WRI group, respiratory viruses were detected in 12 of the 24 patients: influenza AH3 (n = 3), human rhinovirus (n = 3), respiratory syncytial virus (n = 3), human metapneumovirus (n = 3), human bocavirus (n = 2) and human enterovirus (n = 1). Simultaneous detection of two viruses was recorded in two samples in both groups. CONCLUSIONS: The results of this study suggest the presence of common respiratory viruses in the lower respiratory tract without causing symptomatic infection, even in carefully collected lower samples. This may have important implications on the interpretation of the results on the diagnostic setting.
publishDate 2020
dc.date.none.fl_str_mv 2020-02-21T23:54:34Z
2020-02-13
2020-02-13T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10362/93191
url http://hdl.handle.net/10362/93191
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 1471-2466
PURE: 16971086
https://doi.org/10.1186/s12890-020-1082-5
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eu_rights_str_mv openAccess
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