Transancestral mapping and genetic load in systemic lupus erythematosus

Detalhes bibliográficos
Autor(a) principal: Langefeld, C.
Data de Publicação: 2017
Outros Autores: Ainsworth, H., Cunninghame Graham, D., Kelly, J., Comeau, M., Marion, M., Howard, T., Ramos, P., Croker, J., Morris, D., Sandling, J., Almlöf, J., Acevedo-Vásquez, E., Alarcón, G., Babini, A., Baca, V., Bengtsson, A., Berbotto, G., Bijl, M., Brown, E., Brunner, H., Cardiel, M., Catoggio, L., Cervera, R., Cucho-Venegas, J., Dahlqvist, S., D'Alfonso, S., Da Silva, B., de la Rúa Figueroa, I., Doria, A., Edberg, J., Endreffy, E., Esquivel-Valerio, J., Fortin, P., Freedman, B., Frostegård, J., García, M., de la Torre, I., Gilkeson, G., Gladman, D., Gunnarsson, I., Guthridge, J., Huggins, J., James, J., Kallenberg, C., Kamen, D., Karp, D., Kaufman, K., Kottyan, L., Kovács, L., Laustrup, H., Lauwerys, B., Li, Q., Maradiaga-Ceceña, M., Martín, J., McCune, J., McWilliams, D., Merrill, J., Miranda, P., Moctezuma, J., Nath, S., Niewold, T., Orozco, L., Ortego-Centeno, N., Petri, M., Pineau, C., Pons-Estel, B., Pope, J., Raj, P., Ramsey-Goldman, R., Reveille, J., Russell, L., Sabio, J., Aguilar-Salinas, C., Scherbarth, H., Scorza, R., Seldin, M., Sjöwall, C., Svenungsson, E., Thompson, S., Toloza, S., Truedsson, L., Tusié-Luna, T., Vasconcelos, C., Vilá, L., Wallace, D., Weisman, M., Wither, J., Bhangale, T., Oksenberg, J., Rioux, J., Gregersen, P., Syvänen, A., Rönnblom, L., Criswell, L., Jacob, C., Sivils, K., Tsao, B., Schanberg, L., Behrens, T., Silverman, E., Alarcón-Riquelme, M., Kimberly, R., Harley, J., Wakeland, E., Graham, R., Gaffney, P., Vyse, T.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.16/2231
Resumo: Systemic lupus erythematosus (SLE) is an autoimmune disease with marked gender and ethnic disparities. We report a large transancestral association study of SLE using Immunochip genotype data from 27,574 individuals of European (EA), African (AA) and Hispanic Amerindian (HA) ancestry. We identify 58 distinct non-HLA regions in EA, 9 in AA and 16 in HA (∼50% of these regions have multiple independent associations); these include 24 novel SLE regions (P<5 × 10-8), refined association signals in established regions, extended associations to additional ancestries, and a disentangled complex HLA multigenic effect. The risk allele count (genetic load) exhibits an accelerating pattern of SLE risk, leading us to posit a cumulative hit hypothesis for autoimmune disease. Comparing results across the three ancestries identifies both ancestry-dependent and ancestry-independent contributions to SLE risk. Our results are consistent with the unique and complex histories of the populations sampled, and collectively help clarify the genetic architecture and ethnic disparities in SLE.
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spelling Transancestral mapping and genetic load in systemic lupus erythematosusSystemic lupus erythematosus (SLE) is an autoimmune disease with marked gender and ethnic disparities. We report a large transancestral association study of SLE using Immunochip genotype data from 27,574 individuals of European (EA), African (AA) and Hispanic Amerindian (HA) ancestry. We identify 58 distinct non-HLA regions in EA, 9 in AA and 16 in HA (∼50% of these regions have multiple independent associations); these include 24 novel SLE regions (P<5 × 10-8), refined association signals in established regions, extended associations to additional ancestries, and a disentangled complex HLA multigenic effect. The risk allele count (genetic load) exhibits an accelerating pattern of SLE risk, leading us to posit a cumulative hit hypothesis for autoimmune disease. Comparing results across the three ancestries identifies both ancestry-dependent and ancestry-independent contributions to SLE risk. Our results are consistent with the unique and complex histories of the populations sampled, and collectively help clarify the genetic architecture and ethnic disparities in SLE.Nature Publishing GroupRepositório Científico do Centro Hospitalar Universitário de Santo AntónioLangefeld, C.Ainsworth, H.Cunninghame Graham, D.Kelly, J.Comeau, M.Marion, M.Howard, T.Ramos, P.Croker, J.Morris, D.Sandling, J.Almlöf, J.Acevedo-Vásquez, E.Alarcón, G.Babini, A.Baca, V.Bengtsson, A.Berbotto, G.Bijl, M.Brown, E.Brunner, H.Cardiel, M.Catoggio, L.Cervera, R.Cucho-Venegas, J.Dahlqvist, S.D'Alfonso, S.Da Silva, B.de la Rúa Figueroa, I.Doria, A.Edberg, J.Endreffy, E.Esquivel-Valerio, J.Fortin, P.Freedman, B.Frostegård, J.García, M.de la Torre, I.Gilkeson, G.Gladman, D.Gunnarsson, I.Guthridge, J.Huggins, J.James, J.Kallenberg, C.Kamen, D.Karp, D.Kaufman, K.Kottyan, L.Kovács, L.Laustrup, H.Lauwerys, B.Li, Q.Maradiaga-Ceceña, M.Martín, J.McCune, J.McWilliams, D.Merrill, J.Miranda, P.Moctezuma, J.Nath, S.Niewold, T.Orozco, L.Ortego-Centeno, N.Petri, M.Pineau, C.Pons-Estel, B.Pope, J.Raj, P.Ramsey-Goldman, R.Reveille, J.Russell, L.Sabio, J.Aguilar-Salinas, C.Scherbarth, H.Scorza, R.Seldin, M.Sjöwall, C.Svenungsson, E.Thompson, S.Toloza, S.Truedsson, L.Tusié-Luna, T.Vasconcelos, C.Vilá, L.Wallace, D.Weisman, M.Wither, J.Bhangale, T.Oksenberg, J.Rioux, J.Gregersen, P.Syvänen, A.Rönnblom, L.Criswell, L.Jacob, C.Sivils, K.Tsao, B.Schanberg, L.Behrens, T.Silverman, E.Alarcón-Riquelme, M.Kimberly, R.Harley, J.Wakeland, E.Graham, R.Gaffney, P.Vyse, T.2018-08-28T10:52:14Z2017-072017-07-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.16/2231engNat Commun. 2017 Jul 17;8:160212041-172310.1038/ncomms16021info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-10-20T10:59:40Zoai:repositorio.chporto.pt:10400.16/2231Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T20:38:27.327382Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Transancestral mapping and genetic load in systemic lupus erythematosus
title Transancestral mapping and genetic load in systemic lupus erythematosus
spellingShingle Transancestral mapping and genetic load in systemic lupus erythematosus
Langefeld, C.
title_short Transancestral mapping and genetic load in systemic lupus erythematosus
title_full Transancestral mapping and genetic load in systemic lupus erythematosus
title_fullStr Transancestral mapping and genetic load in systemic lupus erythematosus
title_full_unstemmed Transancestral mapping and genetic load in systemic lupus erythematosus
title_sort Transancestral mapping and genetic load in systemic lupus erythematosus
author Langefeld, C.
author_facet Langefeld, C.
Ainsworth, H.
Cunninghame Graham, D.
Kelly, J.
Comeau, M.
Marion, M.
Howard, T.
Ramos, P.
Croker, J.
Morris, D.
Sandling, J.
Almlöf, J.
Acevedo-Vásquez, E.
Alarcón, G.
Babini, A.
Baca, V.
Bengtsson, A.
Berbotto, G.
Bijl, M.
Brown, E.
Brunner, H.
Cardiel, M.
Catoggio, L.
Cervera, R.
Cucho-Venegas, J.
Dahlqvist, S.
D'Alfonso, S.
Da Silva, B.
de la Rúa Figueroa, I.
Doria, A.
Edberg, J.
Endreffy, E.
Esquivel-Valerio, J.
Fortin, P.
Freedman, B.
Frostegård, J.
García, M.
de la Torre, I.
Gilkeson, G.
Gladman, D.
Gunnarsson, I.
Guthridge, J.
Huggins, J.
James, J.
Kallenberg, C.
Kamen, D.
Karp, D.
Kaufman, K.
Kottyan, L.
Kovács, L.
Laustrup, H.
Lauwerys, B.
Li, Q.
Maradiaga-Ceceña, M.
Martín, J.
McCune, J.
McWilliams, D.
Merrill, J.
Miranda, P.
Moctezuma, J.
Nath, S.
Niewold, T.
Orozco, L.
Ortego-Centeno, N.
Petri, M.
Pineau, C.
Pons-Estel, B.
Pope, J.
Raj, P.
Ramsey-Goldman, R.
Reveille, J.
Russell, L.
Sabio, J.
Aguilar-Salinas, C.
Scherbarth, H.
Scorza, R.
Seldin, M.
Sjöwall, C.
Svenungsson, E.
Thompson, S.
Toloza, S.
Truedsson, L.
Tusié-Luna, T.
Vasconcelos, C.
Vilá, L.
Wallace, D.
Weisman, M.
Wither, J.
Bhangale, T.
Oksenberg, J.
Rioux, J.
Gregersen, P.
Syvänen, A.
Rönnblom, L.
Criswell, L.
Jacob, C.
Sivils, K.
Tsao, B.
Schanberg, L.
Behrens, T.
Silverman, E.
Alarcón-Riquelme, M.
Kimberly, R.
Harley, J.
Wakeland, E.
Graham, R.
Gaffney, P.
Vyse, T.
author_role author
author2 Ainsworth, H.
Cunninghame Graham, D.
Kelly, J.
Comeau, M.
Marion, M.
Howard, T.
Ramos, P.
Croker, J.
Morris, D.
Sandling, J.
Almlöf, J.
Acevedo-Vásquez, E.
Alarcón, G.
Babini, A.
Baca, V.
Bengtsson, A.
Berbotto, G.
Bijl, M.
Brown, E.
Brunner, H.
Cardiel, M.
Catoggio, L.
Cervera, R.
Cucho-Venegas, J.
Dahlqvist, S.
D'Alfonso, S.
Da Silva, B.
de la Rúa Figueroa, I.
Doria, A.
Edberg, J.
Endreffy, E.
Esquivel-Valerio, J.
Fortin, P.
Freedman, B.
Frostegård, J.
García, M.
de la Torre, I.
Gilkeson, G.
Gladman, D.
Gunnarsson, I.
Guthridge, J.
Huggins, J.
James, J.
Kallenberg, C.
Kamen, D.
Karp, D.
Kaufman, K.
Kottyan, L.
Kovács, L.
Laustrup, H.
Lauwerys, B.
Li, Q.
Maradiaga-Ceceña, M.
Martín, J.
McCune, J.
McWilliams, D.
Merrill, J.
Miranda, P.
Moctezuma, J.
Nath, S.
Niewold, T.
Orozco, L.
Ortego-Centeno, N.
Petri, M.
Pineau, C.
Pons-Estel, B.
Pope, J.
Raj, P.
Ramsey-Goldman, R.
Reveille, J.
Russell, L.
Sabio, J.
Aguilar-Salinas, C.
Scherbarth, H.
Scorza, R.
Seldin, M.
Sjöwall, C.
Svenungsson, E.
Thompson, S.
Toloza, S.
Truedsson, L.
Tusié-Luna, T.
Vasconcelos, C.
Vilá, L.
Wallace, D.
Weisman, M.
Wither, J.
Bhangale, T.
Oksenberg, J.
Rioux, J.
Gregersen, P.
Syvänen, A.
Rönnblom, L.
Criswell, L.
Jacob, C.
Sivils, K.
Tsao, B.
Schanberg, L.
Behrens, T.
Silverman, E.
Alarcón-Riquelme, M.
Kimberly, R.
Harley, J.
Wakeland, E.
Graham, R.
Gaffney, P.
Vyse, T.
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dc.contributor.none.fl_str_mv Repositório Científico do Centro Hospitalar Universitário de Santo António
dc.contributor.author.fl_str_mv Langefeld, C.
Ainsworth, H.
Cunninghame Graham, D.
Kelly, J.
Comeau, M.
Marion, M.
Howard, T.
Ramos, P.
Croker, J.
Morris, D.
Sandling, J.
Almlöf, J.
Acevedo-Vásquez, E.
Alarcón, G.
Babini, A.
Baca, V.
Bengtsson, A.
Berbotto, G.
Bijl, M.
Brown, E.
Brunner, H.
Cardiel, M.
Catoggio, L.
Cervera, R.
Cucho-Venegas, J.
Dahlqvist, S.
D'Alfonso, S.
Da Silva, B.
de la Rúa Figueroa, I.
Doria, A.
Edberg, J.
Endreffy, E.
Esquivel-Valerio, J.
Fortin, P.
Freedman, B.
Frostegård, J.
García, M.
de la Torre, I.
Gilkeson, G.
Gladman, D.
Gunnarsson, I.
Guthridge, J.
Huggins, J.
James, J.
Kallenberg, C.
Kamen, D.
Karp, D.
Kaufman, K.
Kottyan, L.
Kovács, L.
Laustrup, H.
Lauwerys, B.
Li, Q.
Maradiaga-Ceceña, M.
Martín, J.
McCune, J.
McWilliams, D.
Merrill, J.
Miranda, P.
Moctezuma, J.
Nath, S.
Niewold, T.
Orozco, L.
Ortego-Centeno, N.
Petri, M.
Pineau, C.
Pons-Estel, B.
Pope, J.
Raj, P.
Ramsey-Goldman, R.
Reveille, J.
Russell, L.
Sabio, J.
Aguilar-Salinas, C.
Scherbarth, H.
Scorza, R.
Seldin, M.
Sjöwall, C.
Svenungsson, E.
Thompson, S.
Toloza, S.
Truedsson, L.
Tusié-Luna, T.
Vasconcelos, C.
Vilá, L.
Wallace, D.
Weisman, M.
Wither, J.
Bhangale, T.
Oksenberg, J.
Rioux, J.
Gregersen, P.
Syvänen, A.
Rönnblom, L.
Criswell, L.
Jacob, C.
Sivils, K.
Tsao, B.
Schanberg, L.
Behrens, T.
Silverman, E.
Alarcón-Riquelme, M.
Kimberly, R.
Harley, J.
Wakeland, E.
Graham, R.
Gaffney, P.
Vyse, T.
description Systemic lupus erythematosus (SLE) is an autoimmune disease with marked gender and ethnic disparities. We report a large transancestral association study of SLE using Immunochip genotype data from 27,574 individuals of European (EA), African (AA) and Hispanic Amerindian (HA) ancestry. We identify 58 distinct non-HLA regions in EA, 9 in AA and 16 in HA (∼50% of these regions have multiple independent associations); these include 24 novel SLE regions (P<5 × 10-8), refined association signals in established regions, extended associations to additional ancestries, and a disentangled complex HLA multigenic effect. The risk allele count (genetic load) exhibits an accelerating pattern of SLE risk, leading us to posit a cumulative hit hypothesis for autoimmune disease. Comparing results across the three ancestries identifies both ancestry-dependent and ancestry-independent contributions to SLE risk. Our results are consistent with the unique and complex histories of the populations sampled, and collectively help clarify the genetic architecture and ethnic disparities in SLE.
publishDate 2017
dc.date.none.fl_str_mv 2017-07
2017-07-01T00:00:00Z
2018-08-28T10:52:14Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.16/2231
url http://hdl.handle.net/10400.16/2231
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Nat Commun. 2017 Jul 17;8:16021
2041-1723
10.1038/ncomms16021
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Nature Publishing Group
publisher.none.fl_str_mv Nature Publishing Group
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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