Transancestral mapping and genetic load in systemic lupus erythematosus
Autor(a) principal: | |
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Data de Publicação: | 2017 |
Outros Autores: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10400.16/2231 |
Resumo: | Systemic lupus erythematosus (SLE) is an autoimmune disease with marked gender and ethnic disparities. We report a large transancestral association study of SLE using Immunochip genotype data from 27,574 individuals of European (EA), African (AA) and Hispanic Amerindian (HA) ancestry. We identify 58 distinct non-HLA regions in EA, 9 in AA and 16 in HA (∼50% of these regions have multiple independent associations); these include 24 novel SLE regions (P<5 × 10-8), refined association signals in established regions, extended associations to additional ancestries, and a disentangled complex HLA multigenic effect. The risk allele count (genetic load) exhibits an accelerating pattern of SLE risk, leading us to posit a cumulative hit hypothesis for autoimmune disease. Comparing results across the three ancestries identifies both ancestry-dependent and ancestry-independent contributions to SLE risk. Our results are consistent with the unique and complex histories of the populations sampled, and collectively help clarify the genetic architecture and ethnic disparities in SLE. |
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Transancestral mapping and genetic load in systemic lupus erythematosusSystemic lupus erythematosus (SLE) is an autoimmune disease with marked gender and ethnic disparities. We report a large transancestral association study of SLE using Immunochip genotype data from 27,574 individuals of European (EA), African (AA) and Hispanic Amerindian (HA) ancestry. We identify 58 distinct non-HLA regions in EA, 9 in AA and 16 in HA (∼50% of these regions have multiple independent associations); these include 24 novel SLE regions (P<5 × 10-8), refined association signals in established regions, extended associations to additional ancestries, and a disentangled complex HLA multigenic effect. The risk allele count (genetic load) exhibits an accelerating pattern of SLE risk, leading us to posit a cumulative hit hypothesis for autoimmune disease. Comparing results across the three ancestries identifies both ancestry-dependent and ancestry-independent contributions to SLE risk. Our results are consistent with the unique and complex histories of the populations sampled, and collectively help clarify the genetic architecture and ethnic disparities in SLE.Nature Publishing GroupRepositório Científico do Centro Hospitalar Universitário de Santo AntónioLangefeld, C.Ainsworth, H.Cunninghame Graham, D.Kelly, J.Comeau, M.Marion, M.Howard, T.Ramos, P.Croker, J.Morris, D.Sandling, J.Almlöf, J.Acevedo-Vásquez, E.Alarcón, G.Babini, A.Baca, V.Bengtsson, A.Berbotto, G.Bijl, M.Brown, E.Brunner, H.Cardiel, M.Catoggio, L.Cervera, R.Cucho-Venegas, J.Dahlqvist, S.D'Alfonso, S.Da Silva, B.de la Rúa Figueroa, I.Doria, A.Edberg, J.Endreffy, E.Esquivel-Valerio, J.Fortin, P.Freedman, B.Frostegård, J.García, M.de la Torre, I.Gilkeson, G.Gladman, D.Gunnarsson, I.Guthridge, J.Huggins, J.James, J.Kallenberg, C.Kamen, D.Karp, D.Kaufman, K.Kottyan, L.Kovács, L.Laustrup, H.Lauwerys, B.Li, Q.Maradiaga-Ceceña, M.Martín, J.McCune, J.McWilliams, D.Merrill, J.Miranda, P.Moctezuma, J.Nath, S.Niewold, T.Orozco, L.Ortego-Centeno, N.Petri, M.Pineau, C.Pons-Estel, B.Pope, J.Raj, P.Ramsey-Goldman, R.Reveille, J.Russell, L.Sabio, J.Aguilar-Salinas, C.Scherbarth, H.Scorza, R.Seldin, M.Sjöwall, C.Svenungsson, E.Thompson, S.Toloza, S.Truedsson, L.Tusié-Luna, T.Vasconcelos, C.Vilá, L.Wallace, D.Weisman, M.Wither, J.Bhangale, T.Oksenberg, J.Rioux, J.Gregersen, P.Syvänen, A.Rönnblom, L.Criswell, L.Jacob, C.Sivils, K.Tsao, B.Schanberg, L.Behrens, T.Silverman, E.Alarcón-Riquelme, M.Kimberly, R.Harley, J.Wakeland, E.Graham, R.Gaffney, P.Vyse, T.2018-08-28T10:52:14Z2017-072017-07-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.16/2231engNat Commun. 2017 Jul 17;8:160212041-172310.1038/ncomms16021info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-10-20T10:59:40Zoai:repositorio.chporto.pt:10400.16/2231Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T20:38:27.327382Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Transancestral mapping and genetic load in systemic lupus erythematosus |
title |
Transancestral mapping and genetic load in systemic lupus erythematosus |
spellingShingle |
Transancestral mapping and genetic load in systemic lupus erythematosus Langefeld, C. |
title_short |
Transancestral mapping and genetic load in systemic lupus erythematosus |
title_full |
Transancestral mapping and genetic load in systemic lupus erythematosus |
title_fullStr |
Transancestral mapping and genetic load in systemic lupus erythematosus |
title_full_unstemmed |
Transancestral mapping and genetic load in systemic lupus erythematosus |
title_sort |
Transancestral mapping and genetic load in systemic lupus erythematosus |
author |
Langefeld, C. |
author_facet |
Langefeld, C. Ainsworth, H. Cunninghame Graham, D. Kelly, J. Comeau, M. Marion, M. Howard, T. Ramos, P. Croker, J. Morris, D. Sandling, J. Almlöf, J. Acevedo-Vásquez, E. Alarcón, G. Babini, A. Baca, V. Bengtsson, A. Berbotto, G. Bijl, M. Brown, E. Brunner, H. Cardiel, M. Catoggio, L. Cervera, R. Cucho-Venegas, J. Dahlqvist, S. D'Alfonso, S. Da Silva, B. de la Rúa Figueroa, I. Doria, A. Edberg, J. Endreffy, E. Esquivel-Valerio, J. Fortin, P. Freedman, B. Frostegård, J. García, M. de la Torre, I. Gilkeson, G. Gladman, D. Gunnarsson, I. Guthridge, J. Huggins, J. James, J. Kallenberg, C. Kamen, D. Karp, D. Kaufman, K. Kottyan, L. Kovács, L. Laustrup, H. Lauwerys, B. Li, Q. Maradiaga-Ceceña, M. Martín, J. McCune, J. McWilliams, D. Merrill, J. Miranda, P. Moctezuma, J. Nath, S. Niewold, T. Orozco, L. Ortego-Centeno, N. Petri, M. Pineau, C. Pons-Estel, B. Pope, J. Raj, P. Ramsey-Goldman, R. Reveille, J. Russell, L. Sabio, J. Aguilar-Salinas, C. Scherbarth, H. Scorza, R. Seldin, M. Sjöwall, C. Svenungsson, E. Thompson, S. Toloza, S. Truedsson, L. Tusié-Luna, T. Vasconcelos, C. Vilá, L. Wallace, D. Weisman, M. Wither, J. Bhangale, T. Oksenberg, J. Rioux, J. Gregersen, P. Syvänen, A. Rönnblom, L. Criswell, L. Jacob, C. Sivils, K. Tsao, B. Schanberg, L. Behrens, T. Silverman, E. Alarcón-Riquelme, M. Kimberly, R. Harley, J. Wakeland, E. Graham, R. Gaffney, P. Vyse, T. |
author_role |
author |
author2 |
Ainsworth, H. Cunninghame Graham, D. Kelly, J. Comeau, M. Marion, M. Howard, T. Ramos, P. Croker, J. Morris, D. Sandling, J. Almlöf, J. Acevedo-Vásquez, E. Alarcón, G. Babini, A. Baca, V. Bengtsson, A. Berbotto, G. Bijl, M. Brown, E. Brunner, H. Cardiel, M. Catoggio, L. Cervera, R. Cucho-Venegas, J. Dahlqvist, S. D'Alfonso, S. Da Silva, B. de la Rúa Figueroa, I. Doria, A. Edberg, J. Endreffy, E. Esquivel-Valerio, J. Fortin, P. Freedman, B. Frostegård, J. García, M. de la Torre, I. Gilkeson, G. Gladman, D. Gunnarsson, I. Guthridge, J. Huggins, J. James, J. Kallenberg, C. Kamen, D. Karp, D. Kaufman, K. Kottyan, L. Kovács, L. Laustrup, H. Lauwerys, B. Li, Q. Maradiaga-Ceceña, M. Martín, J. McCune, J. McWilliams, D. Merrill, J. Miranda, P. Moctezuma, J. Nath, S. Niewold, T. Orozco, L. Ortego-Centeno, N. Petri, M. Pineau, C. Pons-Estel, B. Pope, J. Raj, P. Ramsey-Goldman, R. Reveille, J. Russell, L. Sabio, J. Aguilar-Salinas, C. Scherbarth, H. Scorza, R. Seldin, M. Sjöwall, C. Svenungsson, E. Thompson, S. Toloza, S. Truedsson, L. Tusié-Luna, T. Vasconcelos, C. Vilá, L. Wallace, D. Weisman, M. Wither, J. Bhangale, T. Oksenberg, J. Rioux, J. Gregersen, P. Syvänen, A. Rönnblom, L. Criswell, L. Jacob, C. Sivils, K. Tsao, B. Schanberg, L. Behrens, T. Silverman, E. Alarcón-Riquelme, M. Kimberly, R. Harley, J. Wakeland, E. Graham, R. Gaffney, P. Vyse, T. |
author2_role |
author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Repositório Científico do Centro Hospitalar Universitário de Santo António |
dc.contributor.author.fl_str_mv |
Langefeld, C. Ainsworth, H. Cunninghame Graham, D. Kelly, J. Comeau, M. Marion, M. Howard, T. Ramos, P. Croker, J. Morris, D. Sandling, J. Almlöf, J. Acevedo-Vásquez, E. Alarcón, G. Babini, A. Baca, V. Bengtsson, A. Berbotto, G. Bijl, M. Brown, E. Brunner, H. Cardiel, M. Catoggio, L. Cervera, R. Cucho-Venegas, J. Dahlqvist, S. D'Alfonso, S. Da Silva, B. de la Rúa Figueroa, I. Doria, A. Edberg, J. Endreffy, E. Esquivel-Valerio, J. Fortin, P. Freedman, B. Frostegård, J. García, M. de la Torre, I. Gilkeson, G. Gladman, D. Gunnarsson, I. Guthridge, J. Huggins, J. James, J. Kallenberg, C. Kamen, D. Karp, D. Kaufman, K. Kottyan, L. Kovács, L. Laustrup, H. Lauwerys, B. Li, Q. Maradiaga-Ceceña, M. Martín, J. McCune, J. McWilliams, D. Merrill, J. Miranda, P. Moctezuma, J. Nath, S. Niewold, T. Orozco, L. Ortego-Centeno, N. Petri, M. Pineau, C. Pons-Estel, B. Pope, J. Raj, P. Ramsey-Goldman, R. Reveille, J. Russell, L. Sabio, J. Aguilar-Salinas, C. Scherbarth, H. Scorza, R. Seldin, M. Sjöwall, C. Svenungsson, E. Thompson, S. Toloza, S. Truedsson, L. Tusié-Luna, T. Vasconcelos, C. Vilá, L. Wallace, D. Weisman, M. Wither, J. Bhangale, T. Oksenberg, J. Rioux, J. Gregersen, P. Syvänen, A. Rönnblom, L. Criswell, L. Jacob, C. Sivils, K. Tsao, B. Schanberg, L. Behrens, T. Silverman, E. Alarcón-Riquelme, M. Kimberly, R. Harley, J. Wakeland, E. Graham, R. Gaffney, P. Vyse, T. |
description |
Systemic lupus erythematosus (SLE) is an autoimmune disease with marked gender and ethnic disparities. We report a large transancestral association study of SLE using Immunochip genotype data from 27,574 individuals of European (EA), African (AA) and Hispanic Amerindian (HA) ancestry. We identify 58 distinct non-HLA regions in EA, 9 in AA and 16 in HA (∼50% of these regions have multiple independent associations); these include 24 novel SLE regions (P<5 × 10-8), refined association signals in established regions, extended associations to additional ancestries, and a disentangled complex HLA multigenic effect. The risk allele count (genetic load) exhibits an accelerating pattern of SLE risk, leading us to posit a cumulative hit hypothesis for autoimmune disease. Comparing results across the three ancestries identifies both ancestry-dependent and ancestry-independent contributions to SLE risk. Our results are consistent with the unique and complex histories of the populations sampled, and collectively help clarify the genetic architecture and ethnic disparities in SLE. |
publishDate |
2017 |
dc.date.none.fl_str_mv |
2017-07 2017-07-01T00:00:00Z 2018-08-28T10:52:14Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10400.16/2231 |
url |
http://hdl.handle.net/10400.16/2231 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Nat Commun. 2017 Jul 17;8:16021 2041-1723 10.1038/ncomms16021 |
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info:eu-repo/semantics/openAccess |
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openAccess |
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application/pdf |
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Nature Publishing Group |
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Nature Publishing Group |
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Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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