Mitochondrial DNA variation of Apis mellifera iberiensis: further insights from a large scale study using sequence data of the tRNAleu-cox2 intergenic region
Autor(a) principal: | |
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Data de Publicação: | 2017 |
Outros Autores: | , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10198/14545 |
Resumo: | A large-scale survey of the Iberian honey bee (Apis mellifera iberiensis) diversity patterns, using sequence data of the tRNAleu-cox2 mitochondrial DNA (mtDNA) region, demonstrates that earlier studies based on the DraI test missed significant components of genetic variation. Based on results from this survey, existing haplotype names were revised and updated following a nomenclature system established earlier and extended herein for the intergenic region. A more complete picture of the complex diversity patterns of IHBs is revealed that includes 164 novel haplotypes, 113 belonging to lineage A and 51 to lineage M and within lineage A and 69 novel haplotypes that belong to sub-lineage AI, 13 to AII, and 31 to AIII. Within lineage M, two novel haplotypes show a striking architecture with features of lineages A and M, which based on sequence comparisons and relationships among haplotypes are seemingly ancestral. These data expand our knowledge of the complex architecture of the tRNAleu-cox2 intergenic region in Apis mellifera and re-emphasizes the importance of Iberia as a source of honey bee mtDNA diversity. |
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Mitochondrial DNA variation of Apis mellifera iberiensis: further insights from a large scale study using sequence data of the tRNAleu-cox2 intergenic regionIberian honey beeApis Mellifera intermissaAncestral haplotype MDraI testA large-scale survey of the Iberian honey bee (Apis mellifera iberiensis) diversity patterns, using sequence data of the tRNAleu-cox2 mitochondrial DNA (mtDNA) region, demonstrates that earlier studies based on the DraI test missed significant components of genetic variation. Based on results from this survey, existing haplotype names were revised and updated following a nomenclature system established earlier and extended herein for the intergenic region. A more complete picture of the complex diversity patterns of IHBs is revealed that includes 164 novel haplotypes, 113 belonging to lineage A and 51 to lineage M and within lineage A and 69 novel haplotypes that belong to sub-lineage AI, 13 to AII, and 31 to AIII. Within lineage M, two novel haplotypes show a striking architecture with features of lineages A and M, which based on sequence comparisons and relationships among haplotypes are seemingly ancestral. These data expand our knowledge of the complex architecture of the tRNAleu-cox2 intergenic region in Apis mellifera and re-emphasizes the importance of Iberia as a source of honey bee mtDNA diversity.SpringerBiblioteca Digital do IPBChávez-Galarza, JulioGarnery, LionelHenriques, DoraNeves, Cátia J.Loucif-Ayad, WahidaJohnston, J. SpencerPinto, M. Alice2017-09-25T16:37:15Z20172017-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10198/14545engChávez-Galarza, Julio; Garnery, Lionel; Henriques, Dora; Neves, Cátia J.; Loucif-Ayad, Wahida; Jonhston, J. Spencer; Pinto, M. Alice (2017). Mitochondrial DNA variation of Apis mellifera iberiensis: further insights from a large scale study using sequence data of the tRNAleu-cox2 intergenic region. Apidologie. ISSN 0044-8435. 48:4, p. 533-54410.1007/s13592-017-0498-2info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-11-21T10:34:10Zoai:bibliotecadigital.ipb.pt:10198/14545Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T23:04:22.639362Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Mitochondrial DNA variation of Apis mellifera iberiensis: further insights from a large scale study using sequence data of the tRNAleu-cox2 intergenic region |
title |
Mitochondrial DNA variation of Apis mellifera iberiensis: further insights from a large scale study using sequence data of the tRNAleu-cox2 intergenic region |
spellingShingle |
Mitochondrial DNA variation of Apis mellifera iberiensis: further insights from a large scale study using sequence data of the tRNAleu-cox2 intergenic region Chávez-Galarza, Julio Iberian honey bee Apis Mellifera intermissa Ancestral haplotype M DraI test |
title_short |
Mitochondrial DNA variation of Apis mellifera iberiensis: further insights from a large scale study using sequence data of the tRNAleu-cox2 intergenic region |
title_full |
Mitochondrial DNA variation of Apis mellifera iberiensis: further insights from a large scale study using sequence data of the tRNAleu-cox2 intergenic region |
title_fullStr |
Mitochondrial DNA variation of Apis mellifera iberiensis: further insights from a large scale study using sequence data of the tRNAleu-cox2 intergenic region |
title_full_unstemmed |
Mitochondrial DNA variation of Apis mellifera iberiensis: further insights from a large scale study using sequence data of the tRNAleu-cox2 intergenic region |
title_sort |
Mitochondrial DNA variation of Apis mellifera iberiensis: further insights from a large scale study using sequence data of the tRNAleu-cox2 intergenic region |
author |
Chávez-Galarza, Julio |
author_facet |
Chávez-Galarza, Julio Garnery, Lionel Henriques, Dora Neves, Cátia J. Loucif-Ayad, Wahida Johnston, J. Spencer Pinto, M. Alice |
author_role |
author |
author2 |
Garnery, Lionel Henriques, Dora Neves, Cátia J. Loucif-Ayad, Wahida Johnston, J. Spencer Pinto, M. Alice |
author2_role |
author author author author author author |
dc.contributor.none.fl_str_mv |
Biblioteca Digital do IPB |
dc.contributor.author.fl_str_mv |
Chávez-Galarza, Julio Garnery, Lionel Henriques, Dora Neves, Cátia J. Loucif-Ayad, Wahida Johnston, J. Spencer Pinto, M. Alice |
dc.subject.por.fl_str_mv |
Iberian honey bee Apis Mellifera intermissa Ancestral haplotype M DraI test |
topic |
Iberian honey bee Apis Mellifera intermissa Ancestral haplotype M DraI test |
description |
A large-scale survey of the Iberian honey bee (Apis mellifera iberiensis) diversity patterns, using sequence data of the tRNAleu-cox2 mitochondrial DNA (mtDNA) region, demonstrates that earlier studies based on the DraI test missed significant components of genetic variation. Based on results from this survey, existing haplotype names were revised and updated following a nomenclature system established earlier and extended herein for the intergenic region. A more complete picture of the complex diversity patterns of IHBs is revealed that includes 164 novel haplotypes, 113 belonging to lineage A and 51 to lineage M and within lineage A and 69 novel haplotypes that belong to sub-lineage AI, 13 to AII, and 31 to AIII. Within lineage M, two novel haplotypes show a striking architecture with features of lineages A and M, which based on sequence comparisons and relationships among haplotypes are seemingly ancestral. These data expand our knowledge of the complex architecture of the tRNAleu-cox2 intergenic region in Apis mellifera and re-emphasizes the importance of Iberia as a source of honey bee mtDNA diversity. |
publishDate |
2017 |
dc.date.none.fl_str_mv |
2017-09-25T16:37:15Z 2017 2017-01-01T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10198/14545 |
url |
http://hdl.handle.net/10198/14545 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Chávez-Galarza, Julio; Garnery, Lionel; Henriques, Dora; Neves, Cátia J.; Loucif-Ayad, Wahida; Jonhston, J. Spencer; Pinto, M. Alice (2017). Mitochondrial DNA variation of Apis mellifera iberiensis: further insights from a large scale study using sequence data of the tRNAleu-cox2 intergenic region. Apidologie. ISSN 0044-8435. 48:4, p. 533-544 10.1007/s13592-017-0498-2 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Springer |
publisher.none.fl_str_mv |
Springer |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
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Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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RCAAP |
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RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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1799135290622738432 |