Sistema de informação laboratorial para o COVID-19
Autor(a) principal: | |
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Data de Publicação: | 2021 |
Tipo de documento: | Dissertação |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10400.22/19277 |
Resumo: | COVID-19, a respiratory disease caused by SARS-CoV-2, first appeared in Wuhan, China, on 31 December 2019. It has since spread worldwide and developed into an ongoing pandemic. Currently, COVID-19 does not have a cure, and prevention is the only way to fight against it. During waves of higher infection cases, tracking the infected population becomes a difficult but crucial task. Only a COVID-19 test can diagnose a person, and RT-PCR tests are the most effective. PORTIC, the research centre for P.Porto, started using its laboratory for RT-PCR tests to diagnose COVID-19 for the P.Porto community and some health centres that belong to ARSN. During this process, the laboratory needs to manage all of the sample and testing information and report the test results. This information management became a burden, and the staff would lose most of the time with administrative tasks. This dissertation’s main objective is to develop a laboratory information system for PORTIC. This system must satisfy the elicited and specified requirements. For that purpose, multiple architectures were analysed, concluding that the clean architecture is the best option for this system. The system supports data importation from multiple external sources, report generation and exportation and the entire sample flow. Its development followed a scrum methodology where each requirement was validated through user acceptance tests at the end of each iteration. To evaluate the system’s success, the laboratory answered a questionnaire to determine the perceived usefulness and ease of use. This concluded that the system was successful since the questionnaire determined that it was extremely useful and easy to use. The developed system is an innovation on COVID-19 testing since there are no real options in the market, and different laboratories can reuse the system to tackle COVID-19 testing. |
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Sistema de informação laboratorial para o COVID-19COVID-19HealthcareLaboratoryLISLIMSInformation systemSoftware architectureClean ArchitectureCuidados de saúdeLaboratórioSistema de informação,Arquitetura de softwareCOVID-19, a respiratory disease caused by SARS-CoV-2, first appeared in Wuhan, China, on 31 December 2019. It has since spread worldwide and developed into an ongoing pandemic. Currently, COVID-19 does not have a cure, and prevention is the only way to fight against it. During waves of higher infection cases, tracking the infected population becomes a difficult but crucial task. Only a COVID-19 test can diagnose a person, and RT-PCR tests are the most effective. PORTIC, the research centre for P.Porto, started using its laboratory for RT-PCR tests to diagnose COVID-19 for the P.Porto community and some health centres that belong to ARSN. During this process, the laboratory needs to manage all of the sample and testing information and report the test results. This information management became a burden, and the staff would lose most of the time with administrative tasks. This dissertation’s main objective is to develop a laboratory information system for PORTIC. This system must satisfy the elicited and specified requirements. For that purpose, multiple architectures were analysed, concluding that the clean architecture is the best option for this system. The system supports data importation from multiple external sources, report generation and exportation and the entire sample flow. Its development followed a scrum methodology where each requirement was validated through user acceptance tests at the end of each iteration. To evaluate the system’s success, the laboratory answered a questionnaire to determine the perceived usefulness and ease of use. This concluded that the system was successful since the questionnaire determined that it was extremely useful and easy to use. The developed system is an innovation on COVID-19 testing since there are no real options in the market, and different laboratories can reuse the system to tackle COVID-19 testing.A COVID-19, uma doença respiratória causada pelo SARS-CoV-2, apareceu pela primeira vez em Wuhan, China no dia 31 de dezembro de 2019. Desde então, esta doença espalhou-se por todo o mundo, devenvolvendo-se numa pandemia em curso. Atualmente, não existe cura para a COVID-19, sendo que a única maneira de resistir à doença é através da prevenção. Durante as ondas de grandes números de infeções, rastrear a população infetada transformase numa tarefa árdua mas fundamental. A única maneira de diagnósticar a doença é através de um teste de COVID-19, sendo que os testes de RT-PCR são os mais eficazes. O PORTIC, centro de pesquisa do P.Porto, começou a realizar testes de RT-PCR, no seu laboratório, para diagnosticar COVID-19 à comunidade do P.Porto e para alguns centros de saúde que pertencem à ARSN. Durante este processo, o laboratório precisa de gerir toda a informação sobre as amostras e os testes, assim como reportar os resultados dos testes. Esta gestão de informação tornou-se num incómodo e os funcionários passaram a perder a maior parte do seu tempo com tarefas administrativas. O objetivo principal desta dissertação é o desenvolvimento de um sistema de informação de laboratório para o PORTIC. Este sistema deverá cumprir os requisitos elicitados e especificados. Para esse propósito, foram analisadas diferentes arquiteturas, chegando-se à conclusão de que a clean architecture é a opção mais viável para este sistema. O sistema suporta importação de dados de múltiplas fontes externas, geração e exportação de relatórios e todo o fluxo de amostras. O desenvolvimento do sistema seguiu uma metodologia scrum onde cada requisito foi validado através de testes de aceitação do utilizador no final de cada iteração. Para avaliar o sucesso do sistema, o laboratório respondeu a um questionário para determinar a utilidade e facilidade de utilização percecionada. Isto concluiu que o sistema foi bem sucedido dado que o questionário determinou que foi extremamente útil e fácil de utilizar. O sistema desenvolvido é uma inovação em testes de COVID-19 pois não existem opções no mercado e outros laboratórios podem reutilizar o sistema para endereçar os testes de COVID-19.Martins, António Constantino LopesRepositório Científico do Instituto Politécnico do PortoRocha, Bruno Daniel Alves2022-01-03T17:22:35Z20212021-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfhttp://hdl.handle.net/10400.22/19277TID:202795977enginfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-03-13T13:13:24Zoai:recipp.ipp.pt:10400.22/19277Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T17:39:21.161983Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Sistema de informação laboratorial para o COVID-19 |
title |
Sistema de informação laboratorial para o COVID-19 |
spellingShingle |
Sistema de informação laboratorial para o COVID-19 Rocha, Bruno Daniel Alves COVID-19 Healthcare Laboratory LIS LIMS Information system Software architecture Clean Architecture Cuidados de saúde Laboratório Sistema de informação, Arquitetura de software |
title_short |
Sistema de informação laboratorial para o COVID-19 |
title_full |
Sistema de informação laboratorial para o COVID-19 |
title_fullStr |
Sistema de informação laboratorial para o COVID-19 |
title_full_unstemmed |
Sistema de informação laboratorial para o COVID-19 |
title_sort |
Sistema de informação laboratorial para o COVID-19 |
author |
Rocha, Bruno Daniel Alves |
author_facet |
Rocha, Bruno Daniel Alves |
author_role |
author |
dc.contributor.none.fl_str_mv |
Martins, António Constantino Lopes Repositório Científico do Instituto Politécnico do Porto |
dc.contributor.author.fl_str_mv |
Rocha, Bruno Daniel Alves |
dc.subject.por.fl_str_mv |
COVID-19 Healthcare Laboratory LIS LIMS Information system Software architecture Clean Architecture Cuidados de saúde Laboratório Sistema de informação, Arquitetura de software |
topic |
COVID-19 Healthcare Laboratory LIS LIMS Information system Software architecture Clean Architecture Cuidados de saúde Laboratório Sistema de informação, Arquitetura de software |
description |
COVID-19, a respiratory disease caused by SARS-CoV-2, first appeared in Wuhan, China, on 31 December 2019. It has since spread worldwide and developed into an ongoing pandemic. Currently, COVID-19 does not have a cure, and prevention is the only way to fight against it. During waves of higher infection cases, tracking the infected population becomes a difficult but crucial task. Only a COVID-19 test can diagnose a person, and RT-PCR tests are the most effective. PORTIC, the research centre for P.Porto, started using its laboratory for RT-PCR tests to diagnose COVID-19 for the P.Porto community and some health centres that belong to ARSN. During this process, the laboratory needs to manage all of the sample and testing information and report the test results. This information management became a burden, and the staff would lose most of the time with administrative tasks. This dissertation’s main objective is to develop a laboratory information system for PORTIC. This system must satisfy the elicited and specified requirements. For that purpose, multiple architectures were analysed, concluding that the clean architecture is the best option for this system. The system supports data importation from multiple external sources, report generation and exportation and the entire sample flow. Its development followed a scrum methodology where each requirement was validated through user acceptance tests at the end of each iteration. To evaluate the system’s success, the laboratory answered a questionnaire to determine the perceived usefulness and ease of use. This concluded that the system was successful since the questionnaire determined that it was extremely useful and easy to use. The developed system is an innovation on COVID-19 testing since there are no real options in the market, and different laboratories can reuse the system to tackle COVID-19 testing. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021 2021-01-01T00:00:00Z 2022-01-03T17:22:35Z |
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info:eu-repo/semantics/publishedVersion |
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http://hdl.handle.net/10400.22/19277 TID:202795977 |
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