Mutational mechanism for DAB1 (ATTTC) n insertion in SCA37: ATTTT repeat lengthening and nucleotide substitution

Detalhes bibliográficos
Autor(a) principal: Loureiro, JR
Data de Publicação: 2020
Outros Autores: Oliveira, CL, Mota, C, Castro, AF, Costa, C, Loureiro, JL, Coutinho, P, Martins, S, Sequeiros, J, Silveira, I
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: https://hdl.handle.net/10216/130747
Resumo: Dynamic mutations by microsatellite instability are the molecular basis of a growing number of neuromuscular and neurodegenerative diseases. Repetitive stretches in the human genome may drive pathogenicity, either by expansion above a given threshold, or by insertion of abnormal tracts in nonpathogenic polymorphic repetitive regions, as is the case in spinocerebellar ataxia type 37 (SCA37). We have recently established that this neurodegenerative disease is caused by an (ATTTC)n insertion within an (ATTTT)n in a noncoding region of DAB1. We now investigated the mutational mechanism that originated the (ATTTC)n insertion within an ancestral (ATTTT)n . Approximately 3% of nonpathogenic (ATTTT)n alleles are interspersed by AT-rich motifs, contrarily to mutant alleles that are composed of pure (ATTTT)n and (ATTTC)n stretches. Haplotype studies in unaffected chromosomes suggested that the primary mutational mechanism, leading to the (ATTTC)n insertion, was likely one or more T>C substitutions in an (ATTTT)n pure allele of approximately 200 repeats. Then, the (ATTTC)n expanded in size, originating a deleterious allele in DAB1 that leads to SCA37. This is likely the mutational mechanism in three similar (TTTCA)n insertions responsible for familial myoclonic epilepsy. Because (ATTTT)n tracts are frequent in the human genome, many loci could be at risk for this mutational process.
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spelling Mutational mechanism for DAB1 (ATTTC) n insertion in SCA37: ATTTT repeat lengthening and nucleotide substitutionAdaptor Proteins, Signal Transducing / geneticsAllelesAnimalsAtaxins / geneticsBase SequenceCase-Control StudiesChromosomesConserved SequenceEvolution, MolecularHaplotypesHumansMutagenesis, InsertionalNerve Tissue Proteins / geneticsPhylogenyPortugalPrimatesRepetitive Sequences, Nucleic AcidDynamic mutations by microsatellite instability are the molecular basis of a growing number of neuromuscular and neurodegenerative diseases. Repetitive stretches in the human genome may drive pathogenicity, either by expansion above a given threshold, or by insertion of abnormal tracts in nonpathogenic polymorphic repetitive regions, as is the case in spinocerebellar ataxia type 37 (SCA37). We have recently established that this neurodegenerative disease is caused by an (ATTTC)n insertion within an (ATTTT)n in a noncoding region of DAB1. We now investigated the mutational mechanism that originated the (ATTTC)n insertion within an ancestral (ATTTT)n . Approximately 3% of nonpathogenic (ATTTT)n alleles are interspersed by AT-rich motifs, contrarily to mutant alleles that are composed of pure (ATTTT)n and (ATTTC)n stretches. Haplotype studies in unaffected chromosomes suggested that the primary mutational mechanism, leading to the (ATTTC)n insertion, was likely one or more T>C substitutions in an (ATTTT)n pure allele of approximately 200 repeats. Then, the (ATTTC)n expanded in size, originating a deleterious allele in DAB1 that leads to SCA37. This is likely the mutational mechanism in three similar (TTTCA)n insertions responsible for familial myoclonic epilepsy. Because (ATTTT)n tracts are frequent in the human genome, many loci could be at risk for this mutational process.20202020-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfapplication/pdfhttps://hdl.handle.net/10216/130747eng1059-779410.1002/humu.23704Loureiro, JROliveira, CLMota, CCastro, AFCosta, CLoureiro, JLCoutinho, PMartins, SSequeiros, JSilveira, Iinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-11-29T15:50:51Zoai:repositorio-aberto.up.pt:10216/130747Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T00:33:34.725109Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Mutational mechanism for DAB1 (ATTTC) n insertion in SCA37: ATTTT repeat lengthening and nucleotide substitution
title Mutational mechanism for DAB1 (ATTTC) n insertion in SCA37: ATTTT repeat lengthening and nucleotide substitution
spellingShingle Mutational mechanism for DAB1 (ATTTC) n insertion in SCA37: ATTTT repeat lengthening and nucleotide substitution
Loureiro, JR
Adaptor Proteins, Signal Transducing / genetics
Alleles
Animals
Ataxins / genetics
Base Sequence
Case-Control Studies
Chromosomes
Conserved Sequence
Evolution, Molecular
Haplotypes
Humans
Mutagenesis, Insertional
Nerve Tissue Proteins / genetics
Phylogeny
Portugal
Primates
Repetitive Sequences, Nucleic Acid
title_short Mutational mechanism for DAB1 (ATTTC) n insertion in SCA37: ATTTT repeat lengthening and nucleotide substitution
title_full Mutational mechanism for DAB1 (ATTTC) n insertion in SCA37: ATTTT repeat lengthening and nucleotide substitution
title_fullStr Mutational mechanism for DAB1 (ATTTC) n insertion in SCA37: ATTTT repeat lengthening and nucleotide substitution
title_full_unstemmed Mutational mechanism for DAB1 (ATTTC) n insertion in SCA37: ATTTT repeat lengthening and nucleotide substitution
title_sort Mutational mechanism for DAB1 (ATTTC) n insertion in SCA37: ATTTT repeat lengthening and nucleotide substitution
author Loureiro, JR
author_facet Loureiro, JR
Oliveira, CL
Mota, C
Castro, AF
Costa, C
Loureiro, JL
Coutinho, P
Martins, S
Sequeiros, J
Silveira, I
author_role author
author2 Oliveira, CL
Mota, C
Castro, AF
Costa, C
Loureiro, JL
Coutinho, P
Martins, S
Sequeiros, J
Silveira, I
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Loureiro, JR
Oliveira, CL
Mota, C
Castro, AF
Costa, C
Loureiro, JL
Coutinho, P
Martins, S
Sequeiros, J
Silveira, I
dc.subject.por.fl_str_mv Adaptor Proteins, Signal Transducing / genetics
Alleles
Animals
Ataxins / genetics
Base Sequence
Case-Control Studies
Chromosomes
Conserved Sequence
Evolution, Molecular
Haplotypes
Humans
Mutagenesis, Insertional
Nerve Tissue Proteins / genetics
Phylogeny
Portugal
Primates
Repetitive Sequences, Nucleic Acid
topic Adaptor Proteins, Signal Transducing / genetics
Alleles
Animals
Ataxins / genetics
Base Sequence
Case-Control Studies
Chromosomes
Conserved Sequence
Evolution, Molecular
Haplotypes
Humans
Mutagenesis, Insertional
Nerve Tissue Proteins / genetics
Phylogeny
Portugal
Primates
Repetitive Sequences, Nucleic Acid
description Dynamic mutations by microsatellite instability are the molecular basis of a growing number of neuromuscular and neurodegenerative diseases. Repetitive stretches in the human genome may drive pathogenicity, either by expansion above a given threshold, or by insertion of abnormal tracts in nonpathogenic polymorphic repetitive regions, as is the case in spinocerebellar ataxia type 37 (SCA37). We have recently established that this neurodegenerative disease is caused by an (ATTTC)n insertion within an (ATTTT)n in a noncoding region of DAB1. We now investigated the mutational mechanism that originated the (ATTTC)n insertion within an ancestral (ATTTT)n . Approximately 3% of nonpathogenic (ATTTT)n alleles are interspersed by AT-rich motifs, contrarily to mutant alleles that are composed of pure (ATTTT)n and (ATTTC)n stretches. Haplotype studies in unaffected chromosomes suggested that the primary mutational mechanism, leading to the (ATTTC)n insertion, was likely one or more T>C substitutions in an (ATTTT)n pure allele of approximately 200 repeats. Then, the (ATTTC)n expanded in size, originating a deleterious allele in DAB1 that leads to SCA37. This is likely the mutational mechanism in three similar (TTTCA)n insertions responsible for familial myoclonic epilepsy. Because (ATTTT)n tracts are frequent in the human genome, many loci could be at risk for this mutational process.
publishDate 2020
dc.date.none.fl_str_mv 2020
2020-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://hdl.handle.net/10216/130747
url https://hdl.handle.net/10216/130747
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 1059-7794
10.1002/humu.23704
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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