A personalized and evolutionary algorithm for interpretable EEG epilepsy seizure prediction

Detalhes bibliográficos
Autor(a) principal: Pinto, Mauro F.
Data de Publicação: 2021
Outros Autores: Leal, Adriana, Lopes, Fábio, Dourado, António, Martins, Pedro, Teixeira, César A.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10316/105444
https://doi.org/10.1038/s41598-021-82828-7
Resumo: Seizure prediction may improve the quality of life of patients suffering from drug-resistant epilepsy, which accounts for about 30% of the total epileptic patients. The pre-ictal period determination, characterized by a transitional stage between normal brain activity and seizure, is a critical step. Past approaches failed to attain real-world applicability due to lack of generalization capacity. More recently, deep learning techniques may outperform traditional classifiers and handle time dependencies. However, despite the existing efforts for providing interpretable insights, clinicians may not be willing to make high-stake decisions based on them. Furthermore, a disadvantageous aspect of the more usual seizure prediction pipeline is its modularity and significant independence between stages. An alternative could be the construction of a search algorithm that, while considering pipeline stages' synergy, fine-tunes the selection of a reduced set of features that are widely used in the literature and computationally efficient. With extracranial recordings from 19 patients suffering from temporal-lobe seizures, we developed a patient-specific evolutionary optimization strategy, aiming to generate the optimal set of features for seizure prediction with a logistic regression classifier, which was tested prospectively in a total of 49 seizures and 710 h of continuous recording and performed above chance for 32% of patients, using a surrogate predictor. These results demonstrate the hypothesis of pre-ictal period identification without the loss of interpretability, which may help understanding brain dynamics leading to seizures and improve prediction algorithms.
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spelling A personalized and evolutionary algorithm for interpretable EEG epilepsy seizure predictionDrug Resistant EpilepsyEpilepsy, Temporal LobeHumansSeizuresAlgorithmsElectroencephalographyPrecision MedicineSignal Processing, Computer-AssistedSeizure prediction may improve the quality of life of patients suffering from drug-resistant epilepsy, which accounts for about 30% of the total epileptic patients. The pre-ictal period determination, characterized by a transitional stage between normal brain activity and seizure, is a critical step. Past approaches failed to attain real-world applicability due to lack of generalization capacity. More recently, deep learning techniques may outperform traditional classifiers and handle time dependencies. However, despite the existing efforts for providing interpretable insights, clinicians may not be willing to make high-stake decisions based on them. Furthermore, a disadvantageous aspect of the more usual seizure prediction pipeline is its modularity and significant independence between stages. An alternative could be the construction of a search algorithm that, while considering pipeline stages' synergy, fine-tunes the selection of a reduced set of features that are widely used in the literature and computationally efficient. With extracranial recordings from 19 patients suffering from temporal-lobe seizures, we developed a patient-specific evolutionary optimization strategy, aiming to generate the optimal set of features for seizure prediction with a logistic regression classifier, which was tested prospectively in a total of 49 seizures and 710 h of continuous recording and performed above chance for 32% of patients, using a surrogate predictor. These results demonstrate the hypothesis of pre-ictal period identification without the loss of interpretability, which may help understanding brain dynamics leading to seizures and improve prediction algorithms.Springer Nature2021-02-09info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/10316/105444http://hdl.handle.net/10316/105444https://doi.org/10.1038/s41598-021-82828-7eng2045-2322Pinto, Mauro F.Leal, AdrianaLopes, FábioDourado, AntónioMartins, PedroTeixeira, César A.info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-02-28T11:11:18Zoai:estudogeral.uc.pt:10316/105444Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T21:22:01.043905Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv A personalized and evolutionary algorithm for interpretable EEG epilepsy seizure prediction
title A personalized and evolutionary algorithm for interpretable EEG epilepsy seizure prediction
spellingShingle A personalized and evolutionary algorithm for interpretable EEG epilepsy seizure prediction
Pinto, Mauro F.
Drug Resistant Epilepsy
Epilepsy, Temporal Lobe
Humans
Seizures
Algorithms
Electroencephalography
Precision Medicine
Signal Processing, Computer-Assisted
title_short A personalized and evolutionary algorithm for interpretable EEG epilepsy seizure prediction
title_full A personalized and evolutionary algorithm for interpretable EEG epilepsy seizure prediction
title_fullStr A personalized and evolutionary algorithm for interpretable EEG epilepsy seizure prediction
title_full_unstemmed A personalized and evolutionary algorithm for interpretable EEG epilepsy seizure prediction
title_sort A personalized and evolutionary algorithm for interpretable EEG epilepsy seizure prediction
author Pinto, Mauro F.
author_facet Pinto, Mauro F.
Leal, Adriana
Lopes, Fábio
Dourado, António
Martins, Pedro
Teixeira, César A.
author_role author
author2 Leal, Adriana
Lopes, Fábio
Dourado, António
Martins, Pedro
Teixeira, César A.
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Pinto, Mauro F.
Leal, Adriana
Lopes, Fábio
Dourado, António
Martins, Pedro
Teixeira, César A.
dc.subject.por.fl_str_mv Drug Resistant Epilepsy
Epilepsy, Temporal Lobe
Humans
Seizures
Algorithms
Electroencephalography
Precision Medicine
Signal Processing, Computer-Assisted
topic Drug Resistant Epilepsy
Epilepsy, Temporal Lobe
Humans
Seizures
Algorithms
Electroencephalography
Precision Medicine
Signal Processing, Computer-Assisted
description Seizure prediction may improve the quality of life of patients suffering from drug-resistant epilepsy, which accounts for about 30% of the total epileptic patients. The pre-ictal period determination, characterized by a transitional stage between normal brain activity and seizure, is a critical step. Past approaches failed to attain real-world applicability due to lack of generalization capacity. More recently, deep learning techniques may outperform traditional classifiers and handle time dependencies. However, despite the existing efforts for providing interpretable insights, clinicians may not be willing to make high-stake decisions based on them. Furthermore, a disadvantageous aspect of the more usual seizure prediction pipeline is its modularity and significant independence between stages. An alternative could be the construction of a search algorithm that, while considering pipeline stages' synergy, fine-tunes the selection of a reduced set of features that are widely used in the literature and computationally efficient. With extracranial recordings from 19 patients suffering from temporal-lobe seizures, we developed a patient-specific evolutionary optimization strategy, aiming to generate the optimal set of features for seizure prediction with a logistic regression classifier, which was tested prospectively in a total of 49 seizures and 710 h of continuous recording and performed above chance for 32% of patients, using a surrogate predictor. These results demonstrate the hypothesis of pre-ictal period identification without the loss of interpretability, which may help understanding brain dynamics leading to seizures and improve prediction algorithms.
publishDate 2021
dc.date.none.fl_str_mv 2021-02-09
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10316/105444
http://hdl.handle.net/10316/105444
https://doi.org/10.1038/s41598-021-82828-7
url http://hdl.handle.net/10316/105444
https://doi.org/10.1038/s41598-021-82828-7
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 2045-2322
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dc.publisher.none.fl_str_mv Springer Nature
publisher.none.fl_str_mv Springer Nature
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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