Complete mitochondrial genomes of the freshwater mussels Amblema plicata (Say, 1817), Pleurobema oviforme (Conrad, 1834), and Popenaias popeii (Lea, 1857) (Bivalvia: Unionidae: Ambleminae)

Detalhes bibliográficos
Autor(a) principal: Teiga-Teixeira, João
Data de Publicação: 2018
Outros Autores: Froufe, Elsa, Gomes-dos-Santos, André, Bogan, Arthur E., Karatayev, Alexander Y., Burlakova, Lyubov E., Aldridge, David C., Bolotov, Ivan N., Vikhrev, Ilya V., Teixeira, Amílcar, Varandas, Simone, Zanatta, David T., Lopes-Lima, Manuel
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10198/23403
Resumo: Freshwater mussels are a critically imperiled group of mollusks that play key ecological roles and provide important services to humans. The Ambleminae is the only subfamily of these mussels, endemic to North America. Complete mitogenomes have only been sequenced for two of five tribes of the subfamily. Pleurobema oviforme, Amblema plicata, and Popenaias popeii each belong to tribes Pleurobemini, Amblemini, and Popenaidini, respectively, and have not had published mitogenomes. Thus, this study aims to present the complete mitogenomes for these species, to provide a phylogeny of the Ambleminae and confirm the gene arrangements with representation from each of its tribes. The newly sequenced mitogenomes range from 15,852 to 15,993 nucleotides, are composed of 13 PCGs, 22 tRNAs, and two rRNAs and all share the same (UF1) gene order.
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spelling Complete mitochondrial genomes of the freshwater mussels Amblema plicata (Say, 1817), Pleurobema oviforme (Conrad, 1834), and Popenaias popeii (Lea, 1857) (Bivalvia: Unionidae: Ambleminae)Amblema plicataAmbleminaemitogenome phylogeneticsPleurobema oviformePopenaias popeiiFreshwater mussels are a critically imperiled group of mollusks that play key ecological roles and provide important services to humans. The Ambleminae is the only subfamily of these mussels, endemic to North America. Complete mitogenomes have only been sequenced for two of five tribes of the subfamily. Pleurobema oviforme, Amblema plicata, and Popenaias popeii each belong to tribes Pleurobemini, Amblemini, and Popenaidini, respectively, and have not had published mitogenomes. Thus, this study aims to present the complete mitogenomes for these species, to provide a phylogeny of the Ambleminae and confirm the gene arrangements with representation from each of its tribes. The newly sequenced mitogenomes range from 15,852 to 15,993 nucleotides, are composed of 13 PCGs, 22 tRNAs, and two rRNAs and all share the same (UF1) gene order.This work was supported by Portuguese Foundation for Science and Technology (FCT) [grant number ConBioMics/BI-Lic/2019-037 (JTT), grant number SFRH/BD/137935/2018 (AGS)]; COMPETE 2020, Portugal 2020 and the European Union through the ERDF, and by Portuguese Foundation for Science and Technology (FCT) through national funds [UID/Multi/04423/2019] under project ConBiomics: the missing approach for the Conservation of Bivalves Project, and [project number NORTE-01- 0145-FEDER-030286]. Fieldwork in Texas was funded by the U.S. Fish and Wildlife Service, and Texas Parks and Wildlife Department (TPWD) as a Joint Traditional Section 6 Project 407348.Biblioteca Digital do IPBTeiga-Teixeira, JoãoFroufe, ElsaGomes-dos-Santos, AndréBogan, Arthur E.Karatayev, Alexander Y.Burlakova, Lyubov E.Aldridge, David C.Bolotov, Ivan N.Vikhrev, Ilya V.Teixeira, AmílcarVarandas, SimoneZanatta, David T.Lopes-Lima, Manuel2018-01-19T10:00:00Z20202020-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10198/23403engTeiga-Teixeira, João; Froufe, Elsa; Gomes-dos-Santos, André; Bogan, Arthur E.; Karatayev, Alexander Y.; Burlakova, Lyubov E.; Aldridge, David C.; Bolotov, Ivan N.; Vikhrev, Ilya V.; Teixeira, Amílcar; Varandas, Simone; Zanatta, David T.; Lopes-Lima, Manuel (2020) - Complete mitochondrial genomes of the freshwater mussels Amblema plicata (Say, 1817), Pleurobema oviforme (Conrad, 1834), and Popenaias popeii (Lea, 1857) (Bivalvia: Unionidae: Ambleminae). Mitochondrial DNA Part B: Resources. ISSN . 5:3, p. 2977-297910.1080/23802359.2020.1791008info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-11-21T10:52:19Zoai:bibliotecadigital.ipb.pt:10198/23403Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T23:14:24.289537Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Complete mitochondrial genomes of the freshwater mussels Amblema plicata (Say, 1817), Pleurobema oviforme (Conrad, 1834), and Popenaias popeii (Lea, 1857) (Bivalvia: Unionidae: Ambleminae)
title Complete mitochondrial genomes of the freshwater mussels Amblema plicata (Say, 1817), Pleurobema oviforme (Conrad, 1834), and Popenaias popeii (Lea, 1857) (Bivalvia: Unionidae: Ambleminae)
spellingShingle Complete mitochondrial genomes of the freshwater mussels Amblema plicata (Say, 1817), Pleurobema oviforme (Conrad, 1834), and Popenaias popeii (Lea, 1857) (Bivalvia: Unionidae: Ambleminae)
Teiga-Teixeira, João
Amblema plicata
Ambleminae
mitogenome phylogenetics
Pleurobema oviforme
Popenaias popeii
title_short Complete mitochondrial genomes of the freshwater mussels Amblema plicata (Say, 1817), Pleurobema oviforme (Conrad, 1834), and Popenaias popeii (Lea, 1857) (Bivalvia: Unionidae: Ambleminae)
title_full Complete mitochondrial genomes of the freshwater mussels Amblema plicata (Say, 1817), Pleurobema oviforme (Conrad, 1834), and Popenaias popeii (Lea, 1857) (Bivalvia: Unionidae: Ambleminae)
title_fullStr Complete mitochondrial genomes of the freshwater mussels Amblema plicata (Say, 1817), Pleurobema oviforme (Conrad, 1834), and Popenaias popeii (Lea, 1857) (Bivalvia: Unionidae: Ambleminae)
title_full_unstemmed Complete mitochondrial genomes of the freshwater mussels Amblema plicata (Say, 1817), Pleurobema oviforme (Conrad, 1834), and Popenaias popeii (Lea, 1857) (Bivalvia: Unionidae: Ambleminae)
title_sort Complete mitochondrial genomes of the freshwater mussels Amblema plicata (Say, 1817), Pleurobema oviforme (Conrad, 1834), and Popenaias popeii (Lea, 1857) (Bivalvia: Unionidae: Ambleminae)
author Teiga-Teixeira, João
author_facet Teiga-Teixeira, João
Froufe, Elsa
Gomes-dos-Santos, André
Bogan, Arthur E.
Karatayev, Alexander Y.
Burlakova, Lyubov E.
Aldridge, David C.
Bolotov, Ivan N.
Vikhrev, Ilya V.
Teixeira, Amílcar
Varandas, Simone
Zanatta, David T.
Lopes-Lima, Manuel
author_role author
author2 Froufe, Elsa
Gomes-dos-Santos, André
Bogan, Arthur E.
Karatayev, Alexander Y.
Burlakova, Lyubov E.
Aldridge, David C.
Bolotov, Ivan N.
Vikhrev, Ilya V.
Teixeira, Amílcar
Varandas, Simone
Zanatta, David T.
Lopes-Lima, Manuel
author2_role author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Biblioteca Digital do IPB
dc.contributor.author.fl_str_mv Teiga-Teixeira, João
Froufe, Elsa
Gomes-dos-Santos, André
Bogan, Arthur E.
Karatayev, Alexander Y.
Burlakova, Lyubov E.
Aldridge, David C.
Bolotov, Ivan N.
Vikhrev, Ilya V.
Teixeira, Amílcar
Varandas, Simone
Zanatta, David T.
Lopes-Lima, Manuel
dc.subject.por.fl_str_mv Amblema plicata
Ambleminae
mitogenome phylogenetics
Pleurobema oviforme
Popenaias popeii
topic Amblema plicata
Ambleminae
mitogenome phylogenetics
Pleurobema oviforme
Popenaias popeii
description Freshwater mussels are a critically imperiled group of mollusks that play key ecological roles and provide important services to humans. The Ambleminae is the only subfamily of these mussels, endemic to North America. Complete mitogenomes have only been sequenced for two of five tribes of the subfamily. Pleurobema oviforme, Amblema plicata, and Popenaias popeii each belong to tribes Pleurobemini, Amblemini, and Popenaidini, respectively, and have not had published mitogenomes. Thus, this study aims to present the complete mitogenomes for these species, to provide a phylogeny of the Ambleminae and confirm the gene arrangements with representation from each of its tribes. The newly sequenced mitogenomes range from 15,852 to 15,993 nucleotides, are composed of 13 PCGs, 22 tRNAs, and two rRNAs and all share the same (UF1) gene order.
publishDate 2018
dc.date.none.fl_str_mv 2018-01-19T10:00:00Z
2020
2020-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10198/23403
url http://hdl.handle.net/10198/23403
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Teiga-Teixeira, João; Froufe, Elsa; Gomes-dos-Santos, André; Bogan, Arthur E.; Karatayev, Alexander Y.; Burlakova, Lyubov E.; Aldridge, David C.; Bolotov, Ivan N.; Vikhrev, Ilya V.; Teixeira, Amílcar; Varandas, Simone; Zanatta, David T.; Lopes-Lima, Manuel (2020) - Complete mitochondrial genomes of the freshwater mussels Amblema plicata (Say, 1817), Pleurobema oviforme (Conrad, 1834), and Popenaias popeii (Lea, 1857) (Bivalvia: Unionidae: Ambleminae). Mitochondrial DNA Part B: Resources. ISSN . 5:3, p. 2977-2979
10.1080/23802359.2020.1791008
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
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repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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