Advances in chemical and biological methods to identify microorganisms—from past to present

Detalhes bibliográficos
Autor(a) principal: Franco-Duarte, R
Data de Publicação: 2019
Outros Autores: Cernáková, L, Kadam, S, Kaushik, K, Salehi, B, Bevilacqua, A, Corbo, M, Antolak, H, Dybka-Stepien, K, Leszczewicz, M, Tintino, S, Souza, V, Sharifi-Rad, J, Coutinho, H, Martins, N, Rodrigues, C
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: https://hdl.handle.net/10216/137943
Resumo: Fast detection and identification of microorganisms is a challenging and significant feature from industry to medicine. Standard approaches are known to be very time-consuming and labor-intensive (e.g., culture media and biochemical tests). Conversely, screening techniques demand a quick and low-cost grouping of bacterial/fungal isolates and current analysis call for broad reports of microorganisms, involving the application of molecular techniques (e.g., 16S ribosomal RNA gene sequencing based on polymerase chain reaction). The goal of this review is to present the past and the present methods of detection and identification of microorganisms, and to discuss their advantages and their limitations.
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spelling Advances in chemical and biological methods to identify microorganisms—from past to presentChromogenic mediaDNA fingerprintingIdentification methodsMALDI-TOFMicroscopy techniquesPCRRAPD PCRReal-time PCRWGSFast detection and identification of microorganisms is a challenging and significant feature from industry to medicine. Standard approaches are known to be very time-consuming and labor-intensive (e.g., culture media and biochemical tests). Conversely, screening techniques demand a quick and low-cost grouping of bacterial/fungal isolates and current analysis call for broad reports of microorganisms, involving the application of molecular techniques (e.g., 16S ribosomal RNA gene sequencing based on polymerase chain reaction). The goal of this review is to present the past and the present methods of detection and identification of microorganisms, and to discuss their advantages and their limitations.MDPI20192019-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttps://hdl.handle.net/10216/137943eng2076-260710.3390/microorganisms7050130Franco-Duarte, RCernáková, LKadam, SKaushik, KSalehi, BBevilacqua, ACorbo, MAntolak, HDybka-Stepien, KLeszczewicz, MTintino, SSouza, VSharifi-Rad, JCoutinho, HMartins, NRodrigues, Cinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-11-29T16:06:43Zoai:repositorio-aberto.up.pt:10216/137943Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T00:38:00.032190Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Advances in chemical and biological methods to identify microorganisms—from past to present
title Advances in chemical and biological methods to identify microorganisms—from past to present
spellingShingle Advances in chemical and biological methods to identify microorganisms—from past to present
Franco-Duarte, R
Chromogenic media
DNA fingerprinting
Identification methods
MALDI-TOF
Microscopy techniques
PCR
RAPD PCR
Real-time PCR
WGS
title_short Advances in chemical and biological methods to identify microorganisms—from past to present
title_full Advances in chemical and biological methods to identify microorganisms—from past to present
title_fullStr Advances in chemical and biological methods to identify microorganisms—from past to present
title_full_unstemmed Advances in chemical and biological methods to identify microorganisms—from past to present
title_sort Advances in chemical and biological methods to identify microorganisms—from past to present
author Franco-Duarte, R
author_facet Franco-Duarte, R
Cernáková, L
Kadam, S
Kaushik, K
Salehi, B
Bevilacqua, A
Corbo, M
Antolak, H
Dybka-Stepien, K
Leszczewicz, M
Tintino, S
Souza, V
Sharifi-Rad, J
Coutinho, H
Martins, N
Rodrigues, C
author_role author
author2 Cernáková, L
Kadam, S
Kaushik, K
Salehi, B
Bevilacqua, A
Corbo, M
Antolak, H
Dybka-Stepien, K
Leszczewicz, M
Tintino, S
Souza, V
Sharifi-Rad, J
Coutinho, H
Martins, N
Rodrigues, C
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Franco-Duarte, R
Cernáková, L
Kadam, S
Kaushik, K
Salehi, B
Bevilacqua, A
Corbo, M
Antolak, H
Dybka-Stepien, K
Leszczewicz, M
Tintino, S
Souza, V
Sharifi-Rad, J
Coutinho, H
Martins, N
Rodrigues, C
dc.subject.por.fl_str_mv Chromogenic media
DNA fingerprinting
Identification methods
MALDI-TOF
Microscopy techniques
PCR
RAPD PCR
Real-time PCR
WGS
topic Chromogenic media
DNA fingerprinting
Identification methods
MALDI-TOF
Microscopy techniques
PCR
RAPD PCR
Real-time PCR
WGS
description Fast detection and identification of microorganisms is a challenging and significant feature from industry to medicine. Standard approaches are known to be very time-consuming and labor-intensive (e.g., culture media and biochemical tests). Conversely, screening techniques demand a quick and low-cost grouping of bacterial/fungal isolates and current analysis call for broad reports of microorganisms, involving the application of molecular techniques (e.g., 16S ribosomal RNA gene sequencing based on polymerase chain reaction). The goal of this review is to present the past and the present methods of detection and identification of microorganisms, and to discuss their advantages and their limitations.
publishDate 2019
dc.date.none.fl_str_mv 2019
2019-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://hdl.handle.net/10216/137943
url https://hdl.handle.net/10216/137943
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 2076-2607
10.3390/microorganisms7050130
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv MDPI
publisher.none.fl_str_mv MDPI
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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