Advances in chemical and biological methods to identify microorganisms—from past to present
Autor(a) principal: | |
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Data de Publicação: | 2019 |
Outros Autores: | , , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | https://hdl.handle.net/10216/137943 |
Resumo: | Fast detection and identification of microorganisms is a challenging and significant feature from industry to medicine. Standard approaches are known to be very time-consuming and labor-intensive (e.g., culture media and biochemical tests). Conversely, screening techniques demand a quick and low-cost grouping of bacterial/fungal isolates and current analysis call for broad reports of microorganisms, involving the application of molecular techniques (e.g., 16S ribosomal RNA gene sequencing based on polymerase chain reaction). The goal of this review is to present the past and the present methods of detection and identification of microorganisms, and to discuss their advantages and their limitations. |
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Advances in chemical and biological methods to identify microorganisms—from past to presentChromogenic mediaDNA fingerprintingIdentification methodsMALDI-TOFMicroscopy techniquesPCRRAPD PCRReal-time PCRWGSFast detection and identification of microorganisms is a challenging and significant feature from industry to medicine. Standard approaches are known to be very time-consuming and labor-intensive (e.g., culture media and biochemical tests). Conversely, screening techniques demand a quick and low-cost grouping of bacterial/fungal isolates and current analysis call for broad reports of microorganisms, involving the application of molecular techniques (e.g., 16S ribosomal RNA gene sequencing based on polymerase chain reaction). The goal of this review is to present the past and the present methods of detection and identification of microorganisms, and to discuss their advantages and their limitations.MDPI20192019-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttps://hdl.handle.net/10216/137943eng2076-260710.3390/microorganisms7050130Franco-Duarte, RCernáková, LKadam, SKaushik, KSalehi, BBevilacqua, ACorbo, MAntolak, HDybka-Stepien, KLeszczewicz, MTintino, SSouza, VSharifi-Rad, JCoutinho, HMartins, NRodrigues, Cinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-11-29T16:06:43Zoai:repositorio-aberto.up.pt:10216/137943Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T00:38:00.032190Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Advances in chemical and biological methods to identify microorganisms—from past to present |
title |
Advances in chemical and biological methods to identify microorganisms—from past to present |
spellingShingle |
Advances in chemical and biological methods to identify microorganisms—from past to present Franco-Duarte, R Chromogenic media DNA fingerprinting Identification methods MALDI-TOF Microscopy techniques PCR RAPD PCR Real-time PCR WGS |
title_short |
Advances in chemical and biological methods to identify microorganisms—from past to present |
title_full |
Advances in chemical and biological methods to identify microorganisms—from past to present |
title_fullStr |
Advances in chemical and biological methods to identify microorganisms—from past to present |
title_full_unstemmed |
Advances in chemical and biological methods to identify microorganisms—from past to present |
title_sort |
Advances in chemical and biological methods to identify microorganisms—from past to present |
author |
Franco-Duarte, R |
author_facet |
Franco-Duarte, R Cernáková, L Kadam, S Kaushik, K Salehi, B Bevilacqua, A Corbo, M Antolak, H Dybka-Stepien, K Leszczewicz, M Tintino, S Souza, V Sharifi-Rad, J Coutinho, H Martins, N Rodrigues, C |
author_role |
author |
author2 |
Cernáková, L Kadam, S Kaushik, K Salehi, B Bevilacqua, A Corbo, M Antolak, H Dybka-Stepien, K Leszczewicz, M Tintino, S Souza, V Sharifi-Rad, J Coutinho, H Martins, N Rodrigues, C |
author2_role |
author author author author author author author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Franco-Duarte, R Cernáková, L Kadam, S Kaushik, K Salehi, B Bevilacqua, A Corbo, M Antolak, H Dybka-Stepien, K Leszczewicz, M Tintino, S Souza, V Sharifi-Rad, J Coutinho, H Martins, N Rodrigues, C |
dc.subject.por.fl_str_mv |
Chromogenic media DNA fingerprinting Identification methods MALDI-TOF Microscopy techniques PCR RAPD PCR Real-time PCR WGS |
topic |
Chromogenic media DNA fingerprinting Identification methods MALDI-TOF Microscopy techniques PCR RAPD PCR Real-time PCR WGS |
description |
Fast detection and identification of microorganisms is a challenging and significant feature from industry to medicine. Standard approaches are known to be very time-consuming and labor-intensive (e.g., culture media and biochemical tests). Conversely, screening techniques demand a quick and low-cost grouping of bacterial/fungal isolates and current analysis call for broad reports of microorganisms, involving the application of molecular techniques (e.g., 16S ribosomal RNA gene sequencing based on polymerase chain reaction). The goal of this review is to present the past and the present methods of detection and identification of microorganisms, and to discuss their advantages and their limitations. |
publishDate |
2019 |
dc.date.none.fl_str_mv |
2019 2019-01-01T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://hdl.handle.net/10216/137943 |
url |
https://hdl.handle.net/10216/137943 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
2076-2607 10.3390/microorganisms7050130 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
MDPI |
publisher.none.fl_str_mv |
MDPI |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
instname_str |
Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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1799136287348752384 |