Multi-objective hyperparameter optimization of convolutional neural network for obstructive sleep apnea detection

Detalhes bibliográficos
Autor(a) principal: Mostafa, Sheikh Shanawaz
Data de Publicação: 2020
Outros Autores: Mendonça, Fábio, Ravelo-García, Antonio G., Dias, Fernando Morgado
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.13/5555
Resumo: Obstructive sleep apnea (OSA) is a common sleep disorder characterized by interrupted breathing during sleep. Because of the cost, complexity, and accessibility issue related to polysomnography, the gold standard test for apnea detection, automation of the diagnostic test based on a simpler method is desired. Several signals can be used for apnea detection, such as airflow and electrocardiogram. However, the reduction of airflow normally leads to a decrease in the blood oxygen saturation level (SpO2). This signal is usually measured by a pulse oximeter, a sensor that is cheap, portable, and easy to assemble. Therefore, the SpO2 was chosen as the reference signal. Feature based classifiers with shallow neural networks have been developed to provide apnea detection using SpO2. However, two main issues arise, the need for feature creation and the selection of the more relevant features. Deep neural networks can solve these issues by employing featureless methods. Among multiple deep classifiers that have been developed, convolution neural networks (CNN) are gaining popularity. However, the selection of the CNN structure and hyperparameters are typically done by experts, where prior knowledge is essential. With these problems in mind, an algorithm for automatic structure selection and hyper parameterization of a one dimension CNN was developed to detect OSA events using only the SpO2 signal. Three different input sizes and databases were tested, and the best model achieved an average accuracy, sensitivity, and specificity of 94%, 92%, and 96%, respectively.
id RCAP_5d1e8fa39cb9e71e671e25c7c400ac83
oai_identifier_str oai:digituma.uma.pt:10400.13/5555
network_acronym_str RCAP
network_name_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository_id_str 7160
spelling Multi-objective hyperparameter optimization of convolutional neural network for obstructive sleep apnea detectionBiomedical signal processingCNNGenetic algorithmsMachine intelligenceMedical expert systemsPareto optimizationSleep apneaSpO2.Faculdade de Ciências Exatas e da EngenhariaObstructive sleep apnea (OSA) is a common sleep disorder characterized by interrupted breathing during sleep. Because of the cost, complexity, and accessibility issue related to polysomnography, the gold standard test for apnea detection, automation of the diagnostic test based on a simpler method is desired. Several signals can be used for apnea detection, such as airflow and electrocardiogram. However, the reduction of airflow normally leads to a decrease in the blood oxygen saturation level (SpO2). This signal is usually measured by a pulse oximeter, a sensor that is cheap, portable, and easy to assemble. Therefore, the SpO2 was chosen as the reference signal. Feature based classifiers with shallow neural networks have been developed to provide apnea detection using SpO2. However, two main issues arise, the need for feature creation and the selection of the more relevant features. Deep neural networks can solve these issues by employing featureless methods. Among multiple deep classifiers that have been developed, convolution neural networks (CNN) are gaining popularity. However, the selection of the CNN structure and hyperparameters are typically done by experts, where prior knowledge is essential. With these problems in mind, an algorithm for automatic structure selection and hyper parameterization of a one dimension CNN was developed to detect OSA events using only the SpO2 signal. Three different input sizes and databases were tested, and the best model achieved an average accuracy, sensitivity, and specificity of 94%, 92%, and 96%, respectively.IEEEDigitUMaMostafa, Sheikh ShanawazMendonça, FábioRavelo-García, Antonio G.Ravelo-García, Antonio G.Ravelo-García, Antonio G.Ravelo-García, Antonio G.Dias, Fernando Morgado2024-02-15T16:15:24Z20202020-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.13/5555engMostafa, S. S., Mendonca, F., Ravelo-Garcia, A. G., Juliá-Serdá, G. G., & Dias, F. M. (2020). Multi-objective hyperparameter optimization of convolutional neural network for obstructive sleep apnea detection. IEEE Access, 8, 129586-129599.10.1109/ACCESS.2020.3009149info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-02-18T05:33:23Zoai:digituma.uma.pt:10400.13/5555Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T02:38:50.090076Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Multi-objective hyperparameter optimization of convolutional neural network for obstructive sleep apnea detection
title Multi-objective hyperparameter optimization of convolutional neural network for obstructive sleep apnea detection
spellingShingle Multi-objective hyperparameter optimization of convolutional neural network for obstructive sleep apnea detection
Mostafa, Sheikh Shanawaz
Biomedical signal processing
CNN
Genetic algorithms
Machine intelligence
Medical expert systems
Pareto optimization
Sleep apnea
SpO2
.
Faculdade de Ciências Exatas e da Engenharia
title_short Multi-objective hyperparameter optimization of convolutional neural network for obstructive sleep apnea detection
title_full Multi-objective hyperparameter optimization of convolutional neural network for obstructive sleep apnea detection
title_fullStr Multi-objective hyperparameter optimization of convolutional neural network for obstructive sleep apnea detection
title_full_unstemmed Multi-objective hyperparameter optimization of convolutional neural network for obstructive sleep apnea detection
title_sort Multi-objective hyperparameter optimization of convolutional neural network for obstructive sleep apnea detection
author Mostafa, Sheikh Shanawaz
author_facet Mostafa, Sheikh Shanawaz
Mendonça, Fábio
Ravelo-García, Antonio G.
Dias, Fernando Morgado
author_role author
author2 Mendonça, Fábio
Ravelo-García, Antonio G.
Dias, Fernando Morgado
author2_role author
author
author
dc.contributor.none.fl_str_mv DigitUMa
dc.contributor.author.fl_str_mv Mostafa, Sheikh Shanawaz
Mendonça, Fábio
Ravelo-García, Antonio G.
Ravelo-García, Antonio G.
Ravelo-García, Antonio G.
Ravelo-García, Antonio G.
Dias, Fernando Morgado
dc.subject.por.fl_str_mv Biomedical signal processing
CNN
Genetic algorithms
Machine intelligence
Medical expert systems
Pareto optimization
Sleep apnea
SpO2
.
Faculdade de Ciências Exatas e da Engenharia
topic Biomedical signal processing
CNN
Genetic algorithms
Machine intelligence
Medical expert systems
Pareto optimization
Sleep apnea
SpO2
.
Faculdade de Ciências Exatas e da Engenharia
description Obstructive sleep apnea (OSA) is a common sleep disorder characterized by interrupted breathing during sleep. Because of the cost, complexity, and accessibility issue related to polysomnography, the gold standard test for apnea detection, automation of the diagnostic test based on a simpler method is desired. Several signals can be used for apnea detection, such as airflow and electrocardiogram. However, the reduction of airflow normally leads to a decrease in the blood oxygen saturation level (SpO2). This signal is usually measured by a pulse oximeter, a sensor that is cheap, portable, and easy to assemble. Therefore, the SpO2 was chosen as the reference signal. Feature based classifiers with shallow neural networks have been developed to provide apnea detection using SpO2. However, two main issues arise, the need for feature creation and the selection of the more relevant features. Deep neural networks can solve these issues by employing featureless methods. Among multiple deep classifiers that have been developed, convolution neural networks (CNN) are gaining popularity. However, the selection of the CNN structure and hyperparameters are typically done by experts, where prior knowledge is essential. With these problems in mind, an algorithm for automatic structure selection and hyper parameterization of a one dimension CNN was developed to detect OSA events using only the SpO2 signal. Three different input sizes and databases were tested, and the best model achieved an average accuracy, sensitivity, and specificity of 94%, 92%, and 96%, respectively.
publishDate 2020
dc.date.none.fl_str_mv 2020
2020-01-01T00:00:00Z
2024-02-15T16:15:24Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.13/5555
url http://hdl.handle.net/10400.13/5555
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Mostafa, S. S., Mendonca, F., Ravelo-Garcia, A. G., Juliá-Serdá, G. G., & Dias, F. M. (2020). Multi-objective hyperparameter optimization of convolutional neural network for obstructive sleep apnea detection. IEEE Access, 8, 129586-129599.
10.1109/ACCESS.2020.3009149
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv IEEE
publisher.none.fl_str_mv IEEE
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv
_version_ 1799137439188516864