UV-Vis and CIELAB based chemometric characterization of manihot esculenta carotenoid contents

Detalhes bibliográficos
Autor(a) principal: Afonso, T.
Data de Publicação: 2017
Outros Autores: Rodolfo, Moresco, Uarrota, Virgilio G., Navarro, Bruno Bachiega, Nunes, Eduardo da C., Marcelo, Maraschin, Rocha, Miguel
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/1822/49955
Resumo: Vitamin A deficiency is a prevalent health problem in many areas of the world, where cassava genotypes with high pro-vitamin A content have been identified as a strategy to address this issue. In this study, we found a positive correlation between the color of the root pulp and the total carotenoid contents and, importantly, showed how CIELAB color measurements can be used as a non-destructive and fast technique to quantify the amount of carotenoids in cassava root samples, as opposed to traditional methods. We trained several machine learning models using UV-visible spectrophotometry data, CIELAB data and a low-level data fusion of the two. Best performance models were obtained for the total carotenoids contents calculated using the UV-visible dataset as input, with R2 values above 90 %. Using CIELAB and fusion data, values around 60 % and above 90 % were found. Importantly, these results demonstrated how data fusion can lead to a better model performance for prediction when comparing to the use of a single data source. Considering all these findings, the use of colorimetric data associated with UV-visible and HPLC data through statistical and machine learning methods is a reliable way of predicting the content of total carotenoids in cassava root samples.
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spelling UV-Vis and CIELAB based chemometric characterization of manihot esculenta carotenoid contentsCarotenoidsCassava genotypesChemometricsCIELABMachine learningScience & TechnologyVitamin A deficiency is a prevalent health problem in many areas of the world, where cassava genotypes with high pro-vitamin A content have been identified as a strategy to address this issue. In this study, we found a positive correlation between the color of the root pulp and the total carotenoid contents and, importantly, showed how CIELAB color measurements can be used as a non-destructive and fast technique to quantify the amount of carotenoids in cassava root samples, as opposed to traditional methods. We trained several machine learning models using UV-visible spectrophotometry data, CIELAB data and a low-level data fusion of the two. Best performance models were obtained for the total carotenoids contents calculated using the UV-visible dataset as input, with R2 values above 90 %. Using CIELAB and fusion data, values around 60 % and above 90 % were found. Importantly, these results demonstrated how data fusion can lead to a better model performance for prediction when comparing to the use of a single data source. Considering all these findings, the use of colorimetric data associated with UV-visible and HPLC data through statistical and machine learning methods is a reliable way of predicting the content of total carotenoids in cassava root samples.To CNPq (National Counsel of Technological and Scientific Development) for financial support (Process n 407323/2013-9), to CAPES (Coordination for the Improvement of Higher Education Personnel (CAPES), and EPAGRI(AgriculturalResearchandRuralExtensionCompanyofSantaCatarina).Theresearchfellowshipfrom CNPqonbehalfofM.Maraschinisacknowledged.TheworkispartiallyfundedbyProjectPropMine,funded bytheagreementbetweenPortugueseFCT(FoundationforScienceandTechnology)andBrazilianCNPq.info:eu-repo/semantics/publishedVersionDe Gruyter OpenUniversidade do MinhoAfonso, T.Rodolfo, MorescoUarrota, Virgilio G.Navarro, Bruno BachiegaNunes, Eduardo da C.Marcelo, MaraschinRocha, Miguel20172017-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/1822/49955engAfonso, T.; Rodolfo, Moresco; Uarrota, Virgilio G.; Navarro, Bruno Bachiega; Nunes, Eduardo da C.; Marcelo, Maraschin; Rocha, Miguel, UV-Vis and CIELAB based chemometric characterization of manihot esculenta carotenoid contents. Journal of Integrative Bioinformatics, 14(4, SI), 20171613-45161613-451610.1515/jib-2017-0056info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:35:27Zoai:repositorium.sdum.uminho.pt:1822/49955Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:31:18.981Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv UV-Vis and CIELAB based chemometric characterization of manihot esculenta carotenoid contents
title UV-Vis and CIELAB based chemometric characterization of manihot esculenta carotenoid contents
spellingShingle UV-Vis and CIELAB based chemometric characterization of manihot esculenta carotenoid contents
Afonso, T.
Carotenoids
Cassava genotypes
Chemometrics
CIELAB
Machine learning
Science & Technology
title_short UV-Vis and CIELAB based chemometric characterization of manihot esculenta carotenoid contents
title_full UV-Vis and CIELAB based chemometric characterization of manihot esculenta carotenoid contents
title_fullStr UV-Vis and CIELAB based chemometric characterization of manihot esculenta carotenoid contents
title_full_unstemmed UV-Vis and CIELAB based chemometric characterization of manihot esculenta carotenoid contents
title_sort UV-Vis and CIELAB based chemometric characterization of manihot esculenta carotenoid contents
author Afonso, T.
author_facet Afonso, T.
Rodolfo, Moresco
Uarrota, Virgilio G.
Navarro, Bruno Bachiega
Nunes, Eduardo da C.
Marcelo, Maraschin
Rocha, Miguel
author_role author
author2 Rodolfo, Moresco
Uarrota, Virgilio G.
Navarro, Bruno Bachiega
Nunes, Eduardo da C.
Marcelo, Maraschin
Rocha, Miguel
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv Afonso, T.
Rodolfo, Moresco
Uarrota, Virgilio G.
Navarro, Bruno Bachiega
Nunes, Eduardo da C.
Marcelo, Maraschin
Rocha, Miguel
dc.subject.por.fl_str_mv Carotenoids
Cassava genotypes
Chemometrics
CIELAB
Machine learning
Science & Technology
topic Carotenoids
Cassava genotypes
Chemometrics
CIELAB
Machine learning
Science & Technology
description Vitamin A deficiency is a prevalent health problem in many areas of the world, where cassava genotypes with high pro-vitamin A content have been identified as a strategy to address this issue. In this study, we found a positive correlation between the color of the root pulp and the total carotenoid contents and, importantly, showed how CIELAB color measurements can be used as a non-destructive and fast technique to quantify the amount of carotenoids in cassava root samples, as opposed to traditional methods. We trained several machine learning models using UV-visible spectrophotometry data, CIELAB data and a low-level data fusion of the two. Best performance models were obtained for the total carotenoids contents calculated using the UV-visible dataset as input, with R2 values above 90 %. Using CIELAB and fusion data, values around 60 % and above 90 % were found. Importantly, these results demonstrated how data fusion can lead to a better model performance for prediction when comparing to the use of a single data source. Considering all these findings, the use of colorimetric data associated with UV-visible and HPLC data through statistical and machine learning methods is a reliable way of predicting the content of total carotenoids in cassava root samples.
publishDate 2017
dc.date.none.fl_str_mv 2017
2017-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/1822/49955
url http://hdl.handle.net/1822/49955
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Afonso, T.; Rodolfo, Moresco; Uarrota, Virgilio G.; Navarro, Bruno Bachiega; Nunes, Eduardo da C.; Marcelo, Maraschin; Rocha, Miguel, UV-Vis and CIELAB based chemometric characterization of manihot esculenta carotenoid contents. Journal of Integrative Bioinformatics, 14(4, SI), 2017
1613-4516
1613-4516
10.1515/jib-2017-0056
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv De Gruyter Open
publisher.none.fl_str_mv De Gruyter Open
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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