Putative antimicrobial peptides of the posterior salivary glands from the cephalopod octopus vulgaris revealed by exploring a composite protein database

Detalhes bibliográficos
Autor(a) principal: Almeida, D
Data de Publicação: 2020
Outros Autores: Domínguez-Pérez, D, Matos, A, Agüero-Chapin, G, Osorio, H, Vasconcelos, V, Campos, A, Antunes, A
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: https://hdl.handle.net/10216/145277
Resumo: Cephalopods, successful predators, can use a mixture of substances to subdue their prey, becoming interesting sources of bioactive compounds. In addition to neurotoxins and enzymes, the presence of antimicrobial compounds has been reported. Recently, the transcriptome and the whole proteome of the Octopus vulgaris salivary apparatus were released, but the role of some compounds—e.g., histones, antimicrobial peptides (AMPs), and toxins—remains unclear. Herein, we profiled the proteome of the posterior salivary glands (PSGs) of O. vulgaris using two sample preparation protocols combined with a shotgun-proteomics approach. Protein identification was performed against a composite database comprising data from the UniProtKB, all transcriptomes available from the cephalopods’ PSGs, and a comprehensive non-redundant AMPs database. Out of the 10,075 proteins clustered in 1868 protein groups, 90 clusters corresponded to venom protein toxin families. Additionally, we detected putative AMPs clustered with histones previously found as abundant proteins in the saliva of O. vulgaris. Some of these histones, such as H2A and H2B, are involved in systemic inflammatory responses and their antimicrobial effects have been demonstrated. These results not only confirm the production of enzymes and toxins by the O. vulgaris PSGs but also suggest their involvement in the first line of defense against microbes.
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spelling Putative antimicrobial peptides of the posterior salivary glands from the cephalopod octopus vulgaris revealed by exploring a composite protein databaseAMPsCephalopodsCommon octopusShotgun-proteomicsToxinsCephalopods, successful predators, can use a mixture of substances to subdue their prey, becoming interesting sources of bioactive compounds. In addition to neurotoxins and enzymes, the presence of antimicrobial compounds has been reported. Recently, the transcriptome and the whole proteome of the Octopus vulgaris salivary apparatus were released, but the role of some compounds—e.g., histones, antimicrobial peptides (AMPs), and toxins—remains unclear. Herein, we profiled the proteome of the posterior salivary glands (PSGs) of O. vulgaris using two sample preparation protocols combined with a shotgun-proteomics approach. Protein identification was performed against a composite database comprising data from the UniProtKB, all transcriptomes available from the cephalopods’ PSGs, and a comprehensive non-redundant AMPs database. Out of the 10,075 proteins clustered in 1868 protein groups, 90 clusters corresponded to venom protein toxin families. Additionally, we detected putative AMPs clustered with histones previously found as abundant proteins in the saliva of O. vulgaris. Some of these histones, such as H2A and H2B, are involved in systemic inflammatory responses and their antimicrobial effects have been demonstrated. These results not only confirm the production of enzymes and toxins by the O. vulgaris PSGs but also suggest their involvement in the first line of defense against microbes.MDPI20202020-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttps://hdl.handle.net/10216/145277eng2079-638210.3390/antibiotics9110757Almeida, DDomínguez-Pérez, DMatos, AAgüero-Chapin, GOsorio, HVasconcelos, VCampos, AAntunes, Ainfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-11-29T12:41:02Zoai:repositorio-aberto.up.pt:10216/145277Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T23:24:46.076103Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Putative antimicrobial peptides of the posterior salivary glands from the cephalopod octopus vulgaris revealed by exploring a composite protein database
title Putative antimicrobial peptides of the posterior salivary glands from the cephalopod octopus vulgaris revealed by exploring a composite protein database
spellingShingle Putative antimicrobial peptides of the posterior salivary glands from the cephalopod octopus vulgaris revealed by exploring a composite protein database
Almeida, D
AMPs
Cephalopods
Common octopus
Shotgun-proteomics
Toxins
title_short Putative antimicrobial peptides of the posterior salivary glands from the cephalopod octopus vulgaris revealed by exploring a composite protein database
title_full Putative antimicrobial peptides of the posterior salivary glands from the cephalopod octopus vulgaris revealed by exploring a composite protein database
title_fullStr Putative antimicrobial peptides of the posterior salivary glands from the cephalopod octopus vulgaris revealed by exploring a composite protein database
title_full_unstemmed Putative antimicrobial peptides of the posterior salivary glands from the cephalopod octopus vulgaris revealed by exploring a composite protein database
title_sort Putative antimicrobial peptides of the posterior salivary glands from the cephalopod octopus vulgaris revealed by exploring a composite protein database
author Almeida, D
author_facet Almeida, D
Domínguez-Pérez, D
Matos, A
Agüero-Chapin, G
Osorio, H
Vasconcelos, V
Campos, A
Antunes, A
author_role author
author2 Domínguez-Pérez, D
Matos, A
Agüero-Chapin, G
Osorio, H
Vasconcelos, V
Campos, A
Antunes, A
author2_role author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Almeida, D
Domínguez-Pérez, D
Matos, A
Agüero-Chapin, G
Osorio, H
Vasconcelos, V
Campos, A
Antunes, A
dc.subject.por.fl_str_mv AMPs
Cephalopods
Common octopus
Shotgun-proteomics
Toxins
topic AMPs
Cephalopods
Common octopus
Shotgun-proteomics
Toxins
description Cephalopods, successful predators, can use a mixture of substances to subdue their prey, becoming interesting sources of bioactive compounds. In addition to neurotoxins and enzymes, the presence of antimicrobial compounds has been reported. Recently, the transcriptome and the whole proteome of the Octopus vulgaris salivary apparatus were released, but the role of some compounds—e.g., histones, antimicrobial peptides (AMPs), and toxins—remains unclear. Herein, we profiled the proteome of the posterior salivary glands (PSGs) of O. vulgaris using two sample preparation protocols combined with a shotgun-proteomics approach. Protein identification was performed against a composite database comprising data from the UniProtKB, all transcriptomes available from the cephalopods’ PSGs, and a comprehensive non-redundant AMPs database. Out of the 10,075 proteins clustered in 1868 protein groups, 90 clusters corresponded to venom protein toxin families. Additionally, we detected putative AMPs clustered with histones previously found as abundant proteins in the saliva of O. vulgaris. Some of these histones, such as H2A and H2B, are involved in systemic inflammatory responses and their antimicrobial effects have been demonstrated. These results not only confirm the production of enzymes and toxins by the O. vulgaris PSGs but also suggest their involvement in the first line of defense against microbes.
publishDate 2020
dc.date.none.fl_str_mv 2020
2020-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://hdl.handle.net/10216/145277
url https://hdl.handle.net/10216/145277
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 2079-6382
10.3390/antibiotics9110757
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.publisher.none.fl_str_mv MDPI
publisher.none.fl_str_mv MDPI
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