Cross-diffusion-driven instability for reaction-diffusion systems: analysis and simulations

Detalhes bibliográficos
Autor(a) principal: Madzvamuse, Anotida
Data de Publicação: 2015
Outros Autores: Ndakwo, Hussaini, Barreira, Raquel
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.26/22217
Resumo: By introducing linear cross-diffusion for a two-component reaction-diffusion system withactivator-depletedreaction kinetics (Gierer and Meinhardt,Kybernetik 12:30–39,1972;PrigogineandLefever,JChemPhys48:1695–1700,1968;Schnakenberg, J Theor Biol 81:389–400,1979), we derivecross-diffusion-driveninstability conditions and show that they are a generalisation of the classical diffusion-driveninstabilityconditionsintheabsenceofcross-diffusion.Ourmostrevealingresultis that, in contrast to the classical reaction-diffusion systems without cross-diffusion,it is no longer necessary to enforce that one of the species diffuse much faster than theother.Furthermore,it is no longer necessary to have an activator–inhibitor mecha-nism as premises for pattern formation, activator–activator,inhibitor–inhibitorreac-tion kinetics as well asshort-range inhibitionandlong-range activationall have thepotential of giving rise to cross-diffusion-driven instability. To support our theoreti-cal findings, we compute cross-diffusion induced parameter spaces and demonstratesimilarities and differences to those obtained using standard reaction-diffusion theory.Finite element numerical simulations on planary square domains are presented to back-up theoretical predictions. For the numerical simulations presented, we choose parameter values from and outside the classical Turing diffusively-driven instability space;outside, these are chosen to belong to cross-diffusively-driven instability parameterspaces. Our numerical experiments validate our theoretical predictions that parameterspaces induced by cross-diffusion in both theuandvcomponents of the reaction-diffusion system are substantially larger and different from those without cross-diffusion. Furthermore, the parameter spaces without cross-diffusion are sub-spacesof the cross-diffusion induced parameter spaces. Our results allow experimentalists tohave a wider range of parameter spaces from which to select reaction kinetic parametervalues that will give rise to spatial patterning in the presence of cross-diffusion.
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spelling Cross-diffusion-driven instability for reaction-diffusion systems: analysis and simulationsCross-diffusion reaction systemsCross-diffusion driven instabilityParameter space identificationPattern formationPlanary domainsFinite element methodBy introducing linear cross-diffusion for a two-component reaction-diffusion system withactivator-depletedreaction kinetics (Gierer and Meinhardt,Kybernetik 12:30–39,1972;PrigogineandLefever,JChemPhys48:1695–1700,1968;Schnakenberg, J Theor Biol 81:389–400,1979), we derivecross-diffusion-driveninstability conditions and show that they are a generalisation of the classical diffusion-driveninstabilityconditionsintheabsenceofcross-diffusion.Ourmostrevealingresultis that, in contrast to the classical reaction-diffusion systems without cross-diffusion,it is no longer necessary to enforce that one of the species diffuse much faster than theother.Furthermore,it is no longer necessary to have an activator–inhibitor mecha-nism as premises for pattern formation, activator–activator,inhibitor–inhibitorreac-tion kinetics as well asshort-range inhibitionandlong-range activationall have thepotential of giving rise to cross-diffusion-driven instability. To support our theoreti-cal findings, we compute cross-diffusion induced parameter spaces and demonstratesimilarities and differences to those obtained using standard reaction-diffusion theory.Finite element numerical simulations on planary square domains are presented to back-up theoretical predictions. For the numerical simulations presented, we choose parameter values from and outside the classical Turing diffusively-driven instability space;outside, these are chosen to belong to cross-diffusively-driven instability parameterspaces. Our numerical experiments validate our theoretical predictions that parameterspaces induced by cross-diffusion in both theuandvcomponents of the reaction-diffusion system are substantially larger and different from those without cross-diffusion. Furthermore, the parameter spaces without cross-diffusion are sub-spacesof the cross-diffusion induced parameter spaces. Our results allow experimentalists tohave a wider range of parameter spaces from which to select reaction kinetic parametervalues that will give rise to spatial patterning in the presence of cross-diffusion.Repositório ComumMadzvamuse, AnotidaNdakwo, HussainiBarreira, Raquel2018-04-09T13:25:46Z20152015-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.26/22217engMadzvamuse A., Ndakwo, H.S. , Barreira, R. (2015) Cross-diffusion-driven instability for reaction-diffusion systems: Analysis and simulations. J. Math. Biol., 70, pp. 709-743. doi: 10.1007/s00285-014-0779-610.1007/s00285-014-0779-6metadata only accessinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-11-21T09:53:41Zoai:comum.rcaap.pt:10400.26/22217Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T23:09:37.000621Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Cross-diffusion-driven instability for reaction-diffusion systems: analysis and simulations
title Cross-diffusion-driven instability for reaction-diffusion systems: analysis and simulations
spellingShingle Cross-diffusion-driven instability for reaction-diffusion systems: analysis and simulations
Madzvamuse, Anotida
Cross-diffusion reaction systems
Cross-diffusion driven instability
Parameter space identification
Pattern formation
Planary domains
Finite element method
title_short Cross-diffusion-driven instability for reaction-diffusion systems: analysis and simulations
title_full Cross-diffusion-driven instability for reaction-diffusion systems: analysis and simulations
title_fullStr Cross-diffusion-driven instability for reaction-diffusion systems: analysis and simulations
title_full_unstemmed Cross-diffusion-driven instability for reaction-diffusion systems: analysis and simulations
title_sort Cross-diffusion-driven instability for reaction-diffusion systems: analysis and simulations
author Madzvamuse, Anotida
author_facet Madzvamuse, Anotida
Ndakwo, Hussaini
Barreira, Raquel
author_role author
author2 Ndakwo, Hussaini
Barreira, Raquel
author2_role author
author
dc.contributor.none.fl_str_mv Repositório Comum
dc.contributor.author.fl_str_mv Madzvamuse, Anotida
Ndakwo, Hussaini
Barreira, Raquel
dc.subject.por.fl_str_mv Cross-diffusion reaction systems
Cross-diffusion driven instability
Parameter space identification
Pattern formation
Planary domains
Finite element method
topic Cross-diffusion reaction systems
Cross-diffusion driven instability
Parameter space identification
Pattern formation
Planary domains
Finite element method
description By introducing linear cross-diffusion for a two-component reaction-diffusion system withactivator-depletedreaction kinetics (Gierer and Meinhardt,Kybernetik 12:30–39,1972;PrigogineandLefever,JChemPhys48:1695–1700,1968;Schnakenberg, J Theor Biol 81:389–400,1979), we derivecross-diffusion-driveninstability conditions and show that they are a generalisation of the classical diffusion-driveninstabilityconditionsintheabsenceofcross-diffusion.Ourmostrevealingresultis that, in contrast to the classical reaction-diffusion systems without cross-diffusion,it is no longer necessary to enforce that one of the species diffuse much faster than theother.Furthermore,it is no longer necessary to have an activator–inhibitor mecha-nism as premises for pattern formation, activator–activator,inhibitor–inhibitorreac-tion kinetics as well asshort-range inhibitionandlong-range activationall have thepotential of giving rise to cross-diffusion-driven instability. To support our theoreti-cal findings, we compute cross-diffusion induced parameter spaces and demonstratesimilarities and differences to those obtained using standard reaction-diffusion theory.Finite element numerical simulations on planary square domains are presented to back-up theoretical predictions. For the numerical simulations presented, we choose parameter values from and outside the classical Turing diffusively-driven instability space;outside, these are chosen to belong to cross-diffusively-driven instability parameterspaces. Our numerical experiments validate our theoretical predictions that parameterspaces induced by cross-diffusion in both theuandvcomponents of the reaction-diffusion system are substantially larger and different from those without cross-diffusion. Furthermore, the parameter spaces without cross-diffusion are sub-spacesof the cross-diffusion induced parameter spaces. Our results allow experimentalists tohave a wider range of parameter spaces from which to select reaction kinetic parametervalues that will give rise to spatial patterning in the presence of cross-diffusion.
publishDate 2015
dc.date.none.fl_str_mv 2015
2015-01-01T00:00:00Z
2018-04-09T13:25:46Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.26/22217
url http://hdl.handle.net/10400.26/22217
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Madzvamuse A., Ndakwo, H.S. , Barreira, R. (2015) Cross-diffusion-driven instability for reaction-diffusion systems: Analysis and simulations. J. Math. Biol., 70, pp. 709-743. doi: 10.1007/s00285-014-0779-6
10.1007/s00285-014-0779-6
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