How complex, probable, and predictable is genetically driven red queen chaos?

Detalhes bibliográficos
Autor(a) principal: Duarte, Jorge
Data de Publicação: 2015
Outros Autores: Rodrigues, Carla, Januário, Cristina, Martins, Nuno, Sardanyés, Josep
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.21/5989
Resumo: Coevolution between two antagonistic species has been widely studied theoretically for both ecologically- and genetically-driven Red Queen dynamics. A typical outcome of these systems is an oscillatory behavior causing an endless series of one species adaptation and others counter-adaptation. More recently, a mathematical model combining a three-species food chain system with an adaptive dynamics approach revealed genetically driven chaotic Red Queen coevolution. In the present article, we analyze this mathematical model mainly focusing on the impact of species rates of evolution (mutation rates) in the dynamics. Firstly, we analytically proof the boundedness of the trajectories of the chaotic attractor. The complexity of the coupling between the dynamical variables is quantified using observability indices. By using symbolic dynamics theory, we quantify the complexity of genetically driven Red Queen chaos computing the topological entropy of existing one-dimensional iterated maps using Markov partitions. Co-dimensional two bifurcation diagrams are also built from the period ordering of the orbits of the maps. Then, we study the predictability of the Red Queen chaos, found in narrow regions of mutation rates. To extend the previous analyses, we also computed the likeliness of finding chaos in a given region of the parameter space varying other model parameters simultaneously. Such analyses allowed us to compute a mean predictability measure for the system in the explored region of the parameter space. We found that genetically driven Red Queen chaos, although being restricted to small regions of the analyzed parameter space, might be highly unpredictable.
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spelling How complex, probable, and predictable is genetically driven red queen chaos?Adaptive dynamicsChaosCoevolutionEcologyPredator-preyPredictabilityRed QueenCoevolution between two antagonistic species has been widely studied theoretically for both ecologically- and genetically-driven Red Queen dynamics. A typical outcome of these systems is an oscillatory behavior causing an endless series of one species adaptation and others counter-adaptation. More recently, a mathematical model combining a three-species food chain system with an adaptive dynamics approach revealed genetically driven chaotic Red Queen coevolution. In the present article, we analyze this mathematical model mainly focusing on the impact of species rates of evolution (mutation rates) in the dynamics. Firstly, we analytically proof the boundedness of the trajectories of the chaotic attractor. The complexity of the coupling between the dynamical variables is quantified using observability indices. By using symbolic dynamics theory, we quantify the complexity of genetically driven Red Queen chaos computing the topological entropy of existing one-dimensional iterated maps using Markov partitions. Co-dimensional two bifurcation diagrams are also built from the period ordering of the orbits of the maps. Then, we study the predictability of the Red Queen chaos, found in narrow regions of mutation rates. To extend the previous analyses, we also computed the likeliness of finding chaos in a given region of the parameter space varying other model parameters simultaneously. Such analyses allowed us to compute a mean predictability measure for the system in the explored region of the parameter space. We found that genetically driven Red Queen chaos, although being restricted to small regions of the analyzed parameter space, might be highly unpredictable.SPRINGERRCIPLDuarte, JorgeRodrigues, CarlaJanuário, CristinaMartins, NunoSardanyés, Josep2016-04-15T10:12:01Z2015-122015-12-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.21/5989engDUARTE, JORGE; [et al.] - How complex, probable, and predictable is genetically driven red queen chaos? Acta Biotheoretica. ISSN. 0001-5342. Vol. 63, N.º 4 (2015), pp. 341-361.0001-534210.1007/s10441-015-9254-zmetadata only accessinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-08-03T09:50:13Zoai:repositorio.ipl.pt:10400.21/5989Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T20:15:12.226519Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv How complex, probable, and predictable is genetically driven red queen chaos?
title How complex, probable, and predictable is genetically driven red queen chaos?
spellingShingle How complex, probable, and predictable is genetically driven red queen chaos?
Duarte, Jorge
Adaptive dynamics
Chaos
Coevolution
Ecology
Predator-prey
Predictability
Red Queen
title_short How complex, probable, and predictable is genetically driven red queen chaos?
title_full How complex, probable, and predictable is genetically driven red queen chaos?
title_fullStr How complex, probable, and predictable is genetically driven red queen chaos?
title_full_unstemmed How complex, probable, and predictable is genetically driven red queen chaos?
title_sort How complex, probable, and predictable is genetically driven red queen chaos?
author Duarte, Jorge
author_facet Duarte, Jorge
Rodrigues, Carla
Januário, Cristina
Martins, Nuno
Sardanyés, Josep
author_role author
author2 Rodrigues, Carla
Januário, Cristina
Martins, Nuno
Sardanyés, Josep
author2_role author
author
author
author
dc.contributor.none.fl_str_mv RCIPL
dc.contributor.author.fl_str_mv Duarte, Jorge
Rodrigues, Carla
Januário, Cristina
Martins, Nuno
Sardanyés, Josep
dc.subject.por.fl_str_mv Adaptive dynamics
Chaos
Coevolution
Ecology
Predator-prey
Predictability
Red Queen
topic Adaptive dynamics
Chaos
Coevolution
Ecology
Predator-prey
Predictability
Red Queen
description Coevolution between two antagonistic species has been widely studied theoretically for both ecologically- and genetically-driven Red Queen dynamics. A typical outcome of these systems is an oscillatory behavior causing an endless series of one species adaptation and others counter-adaptation. More recently, a mathematical model combining a three-species food chain system with an adaptive dynamics approach revealed genetically driven chaotic Red Queen coevolution. In the present article, we analyze this mathematical model mainly focusing on the impact of species rates of evolution (mutation rates) in the dynamics. Firstly, we analytically proof the boundedness of the trajectories of the chaotic attractor. The complexity of the coupling between the dynamical variables is quantified using observability indices. By using symbolic dynamics theory, we quantify the complexity of genetically driven Red Queen chaos computing the topological entropy of existing one-dimensional iterated maps using Markov partitions. Co-dimensional two bifurcation diagrams are also built from the period ordering of the orbits of the maps. Then, we study the predictability of the Red Queen chaos, found in narrow regions of mutation rates. To extend the previous analyses, we also computed the likeliness of finding chaos in a given region of the parameter space varying other model parameters simultaneously. Such analyses allowed us to compute a mean predictability measure for the system in the explored region of the parameter space. We found that genetically driven Red Queen chaos, although being restricted to small regions of the analyzed parameter space, might be highly unpredictable.
publishDate 2015
dc.date.none.fl_str_mv 2015-12
2015-12-01T00:00:00Z
2016-04-15T10:12:01Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.21/5989
url http://hdl.handle.net/10400.21/5989
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv DUARTE, JORGE; [et al.] - How complex, probable, and predictable is genetically driven red queen chaos? Acta Biotheoretica. ISSN. 0001-5342. Vol. 63, N.º 4 (2015), pp. 341-361.
0001-5342
10.1007/s10441-015-9254-z
dc.rights.driver.fl_str_mv metadata only access
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dc.publisher.none.fl_str_mv SPRINGER
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dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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