Naprt expression regulation mechanisms: novel functions predicted by a bioinformatics approach

Detalhes bibliográficos
Autor(a) principal: Duarte-Pereira, Sara
Data de Publicação: 2021
Outros Autores: Fajarda, Olga, Matos, Sérgio, Oliveira, José Luís, Silva, Raquel Monteiro
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.14/36362
Resumo: The nicotinate phosphoribosyltransferase (NAPRT) gene has gained relevance in the research of cancer therapeutic strategies due to its main role as a NAD biosynthetic enzyme. NAD metabolism is an attractive target for the development of anti-cancer therapies, given the high energy requirements of proliferating cancer cells and NAD-dependent signaling. A few studies have shown that NAPRT expression varies in different cancer types, making it imperative to assess NAPRT expression and functionality status prior to the application of therapeutic strategies targeting NAD. In addition, the recent finding of NAPRT extracellular form (eNAPRT) suggested the involvement of NAPRT in inflammation and signaling. However, the mechanisms regulating NAPRT gene expression have never been thoroughly addressed. In this study, we searched for NAPRT gene expression regulatory mechanisms in transcription factors (TFs), RNA binding proteins (RBPs) and microRNA (miRNAs) databases. We identified several potential regulators of NAPRT transcription activation, downregulation and alternative splicing and performed GO and expression analyses. The results of the functional analysis of TFs, RBPs and miRNAs suggest new, unexpected functions for the NAPRT gene in cell differentiation, development and neuronal biology.
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spelling Naprt expression regulation mechanisms: novel functions predicted by a bioinformatics approachBioinformaticsCell differentiationExpression regulationNAPRT (nicotinate phosphoribosyltransferase)NeurodevelopmentThe nicotinate phosphoribosyltransferase (NAPRT) gene has gained relevance in the research of cancer therapeutic strategies due to its main role as a NAD biosynthetic enzyme. NAD metabolism is an attractive target for the development of anti-cancer therapies, given the high energy requirements of proliferating cancer cells and NAD-dependent signaling. A few studies have shown that NAPRT expression varies in different cancer types, making it imperative to assess NAPRT expression and functionality status prior to the application of therapeutic strategies targeting NAD. In addition, the recent finding of NAPRT extracellular form (eNAPRT) suggested the involvement of NAPRT in inflammation and signaling. However, the mechanisms regulating NAPRT gene expression have never been thoroughly addressed. In this study, we searched for NAPRT gene expression regulatory mechanisms in transcription factors (TFs), RNA binding proteins (RBPs) and microRNA (miRNAs) databases. We identified several potential regulators of NAPRT transcription activation, downregulation and alternative splicing and performed GO and expression analyses. The results of the functional analysis of TFs, RBPs and miRNAs suggest new, unexpected functions for the NAPRT gene in cell differentiation, development and neuronal biology.Veritati - Repositório Institucional da Universidade Católica PortuguesaDuarte-Pereira, SaraFajarda, OlgaMatos, SérgioOliveira, José LuísSilva, Raquel Monteiro2022-01-05T18:11:00Z2021-122021-12-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.14/36362eng2073-442510.3390/genes1212202285121650571PMC870086534946971000737794700001info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-12-05T01:37:35Zoai:repositorio.ucp.pt:10400.14/36362Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T18:29:33.570449Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Naprt expression regulation mechanisms: novel functions predicted by a bioinformatics approach
title Naprt expression regulation mechanisms: novel functions predicted by a bioinformatics approach
spellingShingle Naprt expression regulation mechanisms: novel functions predicted by a bioinformatics approach
Duarte-Pereira, Sara
Bioinformatics
Cell differentiation
Expression regulation
NAPRT (nicotinate phosphoribosyltransferase)
Neurodevelopment
title_short Naprt expression regulation mechanisms: novel functions predicted by a bioinformatics approach
title_full Naprt expression regulation mechanisms: novel functions predicted by a bioinformatics approach
title_fullStr Naprt expression regulation mechanisms: novel functions predicted by a bioinformatics approach
title_full_unstemmed Naprt expression regulation mechanisms: novel functions predicted by a bioinformatics approach
title_sort Naprt expression regulation mechanisms: novel functions predicted by a bioinformatics approach
author Duarte-Pereira, Sara
author_facet Duarte-Pereira, Sara
Fajarda, Olga
Matos, Sérgio
Oliveira, José Luís
Silva, Raquel Monteiro
author_role author
author2 Fajarda, Olga
Matos, Sérgio
Oliveira, José Luís
Silva, Raquel Monteiro
author2_role author
author
author
author
dc.contributor.none.fl_str_mv Veritati - Repositório Institucional da Universidade Católica Portuguesa
dc.contributor.author.fl_str_mv Duarte-Pereira, Sara
Fajarda, Olga
Matos, Sérgio
Oliveira, José Luís
Silva, Raquel Monteiro
dc.subject.por.fl_str_mv Bioinformatics
Cell differentiation
Expression regulation
NAPRT (nicotinate phosphoribosyltransferase)
Neurodevelopment
topic Bioinformatics
Cell differentiation
Expression regulation
NAPRT (nicotinate phosphoribosyltransferase)
Neurodevelopment
description The nicotinate phosphoribosyltransferase (NAPRT) gene has gained relevance in the research of cancer therapeutic strategies due to its main role as a NAD biosynthetic enzyme. NAD metabolism is an attractive target for the development of anti-cancer therapies, given the high energy requirements of proliferating cancer cells and NAD-dependent signaling. A few studies have shown that NAPRT expression varies in different cancer types, making it imperative to assess NAPRT expression and functionality status prior to the application of therapeutic strategies targeting NAD. In addition, the recent finding of NAPRT extracellular form (eNAPRT) suggested the involvement of NAPRT in inflammation and signaling. However, the mechanisms regulating NAPRT gene expression have never been thoroughly addressed. In this study, we searched for NAPRT gene expression regulatory mechanisms in transcription factors (TFs), RNA binding proteins (RBPs) and microRNA (miRNAs) databases. We identified several potential regulators of NAPRT transcription activation, downregulation and alternative splicing and performed GO and expression analyses. The results of the functional analysis of TFs, RBPs and miRNAs suggest new, unexpected functions for the NAPRT gene in cell differentiation, development and neuronal biology.
publishDate 2021
dc.date.none.fl_str_mv 2021-12
2021-12-01T00:00:00Z
2022-01-05T18:11:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.14/36362
url http://hdl.handle.net/10400.14/36362
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 2073-4425
10.3390/genes12122022
85121650571
PMC8700865
34946971
000737794700001
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dc.format.none.fl_str_mv application/pdf
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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