Geographic distribution of methyltransferases of Helicobacter pylori: evidence of human host population isolation and migration

Detalhes bibliográficos
Autor(a) principal: Vale, Filipa
Data de Publicação: 2009
Outros Autores: Mégraud, Francis, Vítor, Jorge M. B.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10451/8615
Resumo: Background Helicobacter pylori colonizes the human stomach and is associated with gastritis, peptic ulcer, and gastric cancer. This ubiquitous association between H. pylori and humans is thought to be present since the origin of modern humans. The H. pylori genome encodes for an exceptional number of restriction and modifications (R-M) systems. To evaluate if R-M systems are an adequate tool to determine the geographic distribution of H. pylori strains, we typed 221 strains from Africa, America, Asia, and Europe, and evaluated the expression of different 29 methyltransferases. Results Independence tests and logistic regression models revealed that ten R-M systems correlate with geographical localization. The distribution pattern of these methyltransferases may have been originated by co-divergence of regional H. pylori after its human host migrated out of Africa. The expression of specific methyltransferases in the H. pylori population may also reflect the genetic and cultural background of its human host. Methyltransferases common to all strains, M. HhaI and M. NaeI, are likely conserved in H. pylori, and may have been present in the bacteria genome since the human diaspora out of Africa. Conclusion This study indicates that some methyltransferases are useful geomarkers, which allow discrimination of bacterial populations, and that can be added to our tools to investigate human migrations.
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spelling Geographic distribution of methyltransferases of Helicobacter pylori: evidence of human host population isolation and migrationBackground Helicobacter pylori colonizes the human stomach and is associated with gastritis, peptic ulcer, and gastric cancer. This ubiquitous association between H. pylori and humans is thought to be present since the origin of modern humans. The H. pylori genome encodes for an exceptional number of restriction and modifications (R-M) systems. To evaluate if R-M systems are an adequate tool to determine the geographic distribution of H. pylori strains, we typed 221 strains from Africa, America, Asia, and Europe, and evaluated the expression of different 29 methyltransferases. Results Independence tests and logistic regression models revealed that ten R-M systems correlate with geographical localization. The distribution pattern of these methyltransferases may have been originated by co-divergence of regional H. pylori after its human host migrated out of Africa. The expression of specific methyltransferases in the H. pylori population may also reflect the genetic and cultural background of its human host. Methyltransferases common to all strains, M. HhaI and M. NaeI, are likely conserved in H. pylori, and may have been present in the bacteria genome since the human diaspora out of Africa. Conclusion This study indicates that some methyltransferases are useful geomarkers, which allow discrimination of bacterial populations, and that can be added to our tools to investigate human migrations.This work was partially supported by New England Biolabs, Inc. (USA)Repositório da Universidade de LisboaVale, FilipaMégraud, FrancisVítor, Jorge M. B.2013-06-04T14:52:22Z20092011-11-18T09:32:06Z2009-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10451/8615engBMC Microbiology, 9 (193) 2009, 10 p.1471-2180http://dx.doi.org/10.1186/1471-2180-9-193info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-11-08T15:45:31Zoai:repositorio.ul.pt:10451/8615Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T21:30:07.426006Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Geographic distribution of methyltransferases of Helicobacter pylori: evidence of human host population isolation and migration
title Geographic distribution of methyltransferases of Helicobacter pylori: evidence of human host population isolation and migration
spellingShingle Geographic distribution of methyltransferases of Helicobacter pylori: evidence of human host population isolation and migration
Vale, Filipa
title_short Geographic distribution of methyltransferases of Helicobacter pylori: evidence of human host population isolation and migration
title_full Geographic distribution of methyltransferases of Helicobacter pylori: evidence of human host population isolation and migration
title_fullStr Geographic distribution of methyltransferases of Helicobacter pylori: evidence of human host population isolation and migration
title_full_unstemmed Geographic distribution of methyltransferases of Helicobacter pylori: evidence of human host population isolation and migration
title_sort Geographic distribution of methyltransferases of Helicobacter pylori: evidence of human host population isolation and migration
author Vale, Filipa
author_facet Vale, Filipa
Mégraud, Francis
Vítor, Jorge M. B.
author_role author
author2 Mégraud, Francis
Vítor, Jorge M. B.
author2_role author
author
dc.contributor.none.fl_str_mv Repositório da Universidade de Lisboa
dc.contributor.author.fl_str_mv Vale, Filipa
Mégraud, Francis
Vítor, Jorge M. B.
description Background Helicobacter pylori colonizes the human stomach and is associated with gastritis, peptic ulcer, and gastric cancer. This ubiquitous association between H. pylori and humans is thought to be present since the origin of modern humans. The H. pylori genome encodes for an exceptional number of restriction and modifications (R-M) systems. To evaluate if R-M systems are an adequate tool to determine the geographic distribution of H. pylori strains, we typed 221 strains from Africa, America, Asia, and Europe, and evaluated the expression of different 29 methyltransferases. Results Independence tests and logistic regression models revealed that ten R-M systems correlate with geographical localization. The distribution pattern of these methyltransferases may have been originated by co-divergence of regional H. pylori after its human host migrated out of Africa. The expression of specific methyltransferases in the H. pylori population may also reflect the genetic and cultural background of its human host. Methyltransferases common to all strains, M. HhaI and M. NaeI, are likely conserved in H. pylori, and may have been present in the bacteria genome since the human diaspora out of Africa. Conclusion This study indicates that some methyltransferases are useful geomarkers, which allow discrimination of bacterial populations, and that can be added to our tools to investigate human migrations.
publishDate 2009
dc.date.none.fl_str_mv 2009
2009-01-01T00:00:00Z
2011-11-18T09:32:06Z
2013-06-04T14:52:22Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.uri.fl_str_mv http://hdl.handle.net/10451/8615
url http://hdl.handle.net/10451/8615
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv BMC Microbiology, 9 (193) 2009, 10 p.
1471-2180
http://dx.doi.org/10.1186/1471-2180-9-193
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