Envisaging a global infrastructure to exploit the potential of digitised collections

Detalhes bibliográficos
Autor(a) principal: Groom, Quentin
Data de Publicação: 2023
Outros Autores: Dillen, Mathias, Addink, Wouter, Ariño, Arturo H., Bölling, Christian, Bonnet, Pierre, Cecchi, Lorenzo, Ellwood, Elizabeth R., Figueira, Rui, Gagnier, Pierre-Yves, Grace, Olwen, Güntsch, Anton, Hardy, Helen, Huybrechts, Pieter, Hyam, Roger, Joly, Alexis, Kommineni, Vamsi Krishna, Larridon, Isabel, Livermore, Laurence, Lopes, Ricardo Jorge, Meeus, Sofie, Miller, Jeremy, Milleville, Kenzo, Panda, Renato, Pignal, Marc, Poelen, Jorrit, Ristevski, Blagoj, Robertson, Tim, Rufino, Ana C., Santos, Joaquim, Schermer, Maarten, Scott, Ben, Seltmann, Katja, Teixeira, Heliana, Trekels, Maarten, Gaikwad, Jitendra
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.26/48471
Resumo: Tens of millions of images from biological collections have become available online over the last two decades. In parallel, there has been a dramatic increase in the capabilities of image analysis technologies, especially those involving machine learning and computer vision. While image analysis has become mainstream in consumer applications, it is still used only on an artisanal basis in the biological collections community, largely because the image corpora are dispersed. Yet, there is massive untapped potential for novel applications and research if images of collection objects could be made accessible in a single corpus. In this paper, we make the case for infrastructure that could support image analysis of collection objects. We show that such infrastructure is entirely feasible and well worth investing in.
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spelling Envisaging a global infrastructure to exploit the potential of digitised collectionsmachine learningfunctional traitsspecies identificationbiodiversity, specimenscomputer visionTens of millions of images from biological collections have become available online over the last two decades. In parallel, there has been a dramatic increase in the capabilities of image analysis technologies, especially those involving machine learning and computer vision. While image analysis has become mainstream in consumer applications, it is still used only on an artisanal basis in the biological collections community, largely because the image corpora are dispersed. Yet, there is massive untapped potential for novel applications and research if images of collection objects could be made accessible in a single corpus. In this paper, we make the case for infrastructure that could support image analysis of collection objects. We show that such infrastructure is entirely feasible and well worth investing in.This work was supported by European Cooperation in Science and Technology (COST) as part of the Mobilise Action CA17106 on Mobilising Data, Experts and Policies in Scientific Collections. Heliana Teixeira was supported by CESAM - FCT/MCTES UIDB/50017/2020+UIDP/50017/2020. Renato Panda was supported by Ci2 - FCT/MCTES UIDP/05567/2020. Elizabeth Ellwood is supported by the National Science Foundation (DBI 2027654). This work was also facilitated by the Research Foundation – Flanders research infrastructure under grant number FWO I001721N, the BiCIKL (grant agreement No 101007492) and SYNTHESYS+ (grant agreement No 823827) projects of the European Union’s Horizon 2020 Research and Innovation action.Pensoft PublishersRepositório ComumGroom, QuentinDillen, MathiasAddink, WouterAriño, Arturo H.Bölling, ChristianBonnet, PierreCecchi, LorenzoEllwood, Elizabeth R.Figueira, RuiGagnier, Pierre-YvesGrace, OlwenGüntsch, AntonHardy, HelenHuybrechts, PieterHyam, RogerJoly, AlexisKommineni, Vamsi KrishnaLarridon, IsabelLivermore, LaurenceLopes, Ricardo JorgeMeeus, SofieMiller, JeremyMilleville, KenzoPanda, RenatoPignal, MarcPoelen, JorritRistevski, BlagojRobertson, TimRufino, Ana C.Santos, JoaquimSchermer, MaartenScott, BenSeltmann, KatjaTeixeira, HelianaTrekels, MaartenGaikwad, Jitendra2023-12-13T13:20:37Z2023-11-302023-12-13T13:10:22Z2023-11-30T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.26/48471eng1314-2828cv-prod-343102610.3897/bdj.11.e109439info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-12-14T14:26:42Zoai:comum.rcaap.pt:10400.26/48471Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T00:42:29.743725Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Envisaging a global infrastructure to exploit the potential of digitised collections
title Envisaging a global infrastructure to exploit the potential of digitised collections
spellingShingle Envisaging a global infrastructure to exploit the potential of digitised collections
Groom, Quentin
machine learning
functional traits
species identification
biodiversity, specimens
computer vision
title_short Envisaging a global infrastructure to exploit the potential of digitised collections
title_full Envisaging a global infrastructure to exploit the potential of digitised collections
title_fullStr Envisaging a global infrastructure to exploit the potential of digitised collections
title_full_unstemmed Envisaging a global infrastructure to exploit the potential of digitised collections
title_sort Envisaging a global infrastructure to exploit the potential of digitised collections
author Groom, Quentin
author_facet Groom, Quentin
Dillen, Mathias
Addink, Wouter
Ariño, Arturo H.
Bölling, Christian
Bonnet, Pierre
Cecchi, Lorenzo
Ellwood, Elizabeth R.
Figueira, Rui
Gagnier, Pierre-Yves
Grace, Olwen
Güntsch, Anton
Hardy, Helen
Huybrechts, Pieter
Hyam, Roger
Joly, Alexis
Kommineni, Vamsi Krishna
Larridon, Isabel
Livermore, Laurence
Lopes, Ricardo Jorge
Meeus, Sofie
Miller, Jeremy
Milleville, Kenzo
Panda, Renato
Pignal, Marc
Poelen, Jorrit
Ristevski, Blagoj
Robertson, Tim
Rufino, Ana C.
Santos, Joaquim
Schermer, Maarten
Scott, Ben
Seltmann, Katja
Teixeira, Heliana
Trekels, Maarten
Gaikwad, Jitendra
author_role author
author2 Dillen, Mathias
Addink, Wouter
Ariño, Arturo H.
Bölling, Christian
Bonnet, Pierre
Cecchi, Lorenzo
Ellwood, Elizabeth R.
Figueira, Rui
Gagnier, Pierre-Yves
Grace, Olwen
Güntsch, Anton
Hardy, Helen
Huybrechts, Pieter
Hyam, Roger
Joly, Alexis
Kommineni, Vamsi Krishna
Larridon, Isabel
Livermore, Laurence
Lopes, Ricardo Jorge
Meeus, Sofie
Miller, Jeremy
Milleville, Kenzo
Panda, Renato
Pignal, Marc
Poelen, Jorrit
Ristevski, Blagoj
Robertson, Tim
Rufino, Ana C.
Santos, Joaquim
Schermer, Maarten
Scott, Ben
Seltmann, Katja
Teixeira, Heliana
Trekels, Maarten
Gaikwad, Jitendra
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Repositório Comum
dc.contributor.author.fl_str_mv Groom, Quentin
Dillen, Mathias
Addink, Wouter
Ariño, Arturo H.
Bölling, Christian
Bonnet, Pierre
Cecchi, Lorenzo
Ellwood, Elizabeth R.
Figueira, Rui
Gagnier, Pierre-Yves
Grace, Olwen
Güntsch, Anton
Hardy, Helen
Huybrechts, Pieter
Hyam, Roger
Joly, Alexis
Kommineni, Vamsi Krishna
Larridon, Isabel
Livermore, Laurence
Lopes, Ricardo Jorge
Meeus, Sofie
Miller, Jeremy
Milleville, Kenzo
Panda, Renato
Pignal, Marc
Poelen, Jorrit
Ristevski, Blagoj
Robertson, Tim
Rufino, Ana C.
Santos, Joaquim
Schermer, Maarten
Scott, Ben
Seltmann, Katja
Teixeira, Heliana
Trekels, Maarten
Gaikwad, Jitendra
dc.subject.por.fl_str_mv machine learning
functional traits
species identification
biodiversity, specimens
computer vision
topic machine learning
functional traits
species identification
biodiversity, specimens
computer vision
description Tens of millions of images from biological collections have become available online over the last two decades. In parallel, there has been a dramatic increase in the capabilities of image analysis technologies, especially those involving machine learning and computer vision. While image analysis has become mainstream in consumer applications, it is still used only on an artisanal basis in the biological collections community, largely because the image corpora are dispersed. Yet, there is massive untapped potential for novel applications and research if images of collection objects could be made accessible in a single corpus. In this paper, we make the case for infrastructure that could support image analysis of collection objects. We show that such infrastructure is entirely feasible and well worth investing in.
publishDate 2023
dc.date.none.fl_str_mv 2023-12-13T13:20:37Z
2023-11-30
2023-12-13T13:10:22Z
2023-11-30T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.26/48471
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dc.language.iso.fl_str_mv eng
language eng
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cv-prod-3431026
10.3897/bdj.11.e109439
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.publisher.none.fl_str_mv Pensoft Publishers
publisher.none.fl_str_mv Pensoft Publishers
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repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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