COPD profiles and treatable traits using minimal resources: Identification, decision tree and stability over time

Detalhes bibliográficos
Autor(a) principal: Marques, Alda
Data de Publicação: 2022
Outros Autores: Souto-Miranda, Sara, Machado, Ana, Oliveira, Ana, Jácome, Cristina, Cruz, Joana, Enes, Vera, Afreixo, Vera, Martins, Vitória, Andrade, Lília, Valente, Carla, Ferreira, Diva, Simão, Paula, Brooks, Dina, Tavares, Ana Helena
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.8/6852
Resumo: Background and objective: Profiles of people with chronic obstructive pulmonary disease (COPD) often do not describe treatable traits, lack validation and/or their stability over time is unknown. We aimed to identify COPD profiles and their treatable traits based on simple and meaningful measures; to develop and validate a decision tree and to explore profile stability over time. Methods: An observational, prospective study was conducted. Clinical characteristics, lung function, symptoms, impact of the disease (COPD Assessment Test—CAT), health-related quality of life, physical activity, lower-limb muscle strength and functional status were collected cross-sectionally and a subsample was followed-up monthly over six months. A principal component analysis and a clustering procedure with k-medoids were applied to identify profiles. A decision tree was developed and validated cross-sectionally. Stability was explored over time with the ratio between the number of timepoints that a participant was classified in the same profile and the total number of timepoints (i.e., 6). Results: 352 people with COPD (67.4 ± 9.9 years; 78.1% male; FEV1 = 56.2 ± 20.6% predicted) participated and 90 (67.6 ± 8.9 years; 85.6% male; FEV1 = 52.1 ± 19.9% predicted) were followed-up. Four profiles were identified with distinct treatable traits. The decision tree included CAT (< 18 or ≥ 18 points); age (< 65 or ≥ 65 years) and FEV1 (< 48 or ≥ 48% predicted) and had an agreement of 71.7% (Cohen’s Kappa = 0.62, p < 0.001) with the actual profiles. 48.9% of participants remained in the same profile whilst 51.1% moved between two (47.8%) or three (3.3%) profiles over time. Overall stability was 86.8 ± 15%. Conclusion: Four profiles and treatable traits were identified with simple and meaningful measures possibly available in low-resource settings. A decision tree with three commonly used variables in the routine assessment of people with COPD is now available for quick allocation to the identified profiles in clinical practice. Profiles and treatable traits may change over time in people with COPD hence, regular assessments to deliver goal-targeted personalised treatments are needed.
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spelling COPD profiles and treatable traits using minimal resources: Identification, decision tree and stability over timePhenotypeCluster analysisTreatable traitsDecision treesCOPDBackground and objective: Profiles of people with chronic obstructive pulmonary disease (COPD) often do not describe treatable traits, lack validation and/or their stability over time is unknown. We aimed to identify COPD profiles and their treatable traits based on simple and meaningful measures; to develop and validate a decision tree and to explore profile stability over time. Methods: An observational, prospective study was conducted. Clinical characteristics, lung function, symptoms, impact of the disease (COPD Assessment Test—CAT), health-related quality of life, physical activity, lower-limb muscle strength and functional status were collected cross-sectionally and a subsample was followed-up monthly over six months. A principal component analysis and a clustering procedure with k-medoids were applied to identify profiles. A decision tree was developed and validated cross-sectionally. Stability was explored over time with the ratio between the number of timepoints that a participant was classified in the same profile and the total number of timepoints (i.e., 6). Results: 352 people with COPD (67.4 ± 9.9 years; 78.1% male; FEV1 = 56.2 ± 20.6% predicted) participated and 90 (67.6 ± 8.9 years; 85.6% male; FEV1 = 52.1 ± 19.9% predicted) were followed-up. Four profiles were identified with distinct treatable traits. The decision tree included CAT (< 18 or ≥ 18 points); age (< 65 or ≥ 65 years) and FEV1 (< 48 or ≥ 48% predicted) and had an agreement of 71.7% (Cohen’s Kappa = 0.62, p < 0.001) with the actual profiles. 48.9% of participants remained in the same profile whilst 51.1% moved between two (47.8%) or three (3.3%) profiles over time. Overall stability was 86.8 ± 15%. Conclusion: Four profiles and treatable traits were identified with simple and meaningful measures possibly available in low-resource settings. A decision tree with three commonly used variables in the routine assessment of people with COPD is now available for quick allocation to the identified profiles in clinical practice. Profiles and treatable traits may change over time in people with COPD hence, regular assessments to deliver goal-targeted personalised treatments are needed.BMCIC-OnlineMarques, AldaSouto-Miranda, SaraMachado, AnaOliveira, AnaJácome, CristinaCruz, JoanaEnes, VeraAfreixo, VeraMartins, VitóriaAndrade, LíliaValente, CarlaFerreira, DivaSimão, PaulaBrooks, DinaTavares, Ana Helena2022-03-28T13:04:06Z2022-02-142022-02-14T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.8/6852engMarques, A., Souto-Miranda, S., Machado, A. et al. COPD profiles and treatable traits using minimal resources: identification, decision tree and stability over time. Respir Res 23, 30 (2022). https://doi.org/10.1186/s12931-022-01954-610.1186/s12931-022-01954-61465-993Xinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-01-17T15:53:46Zoai:iconline.ipleiria.pt:10400.8/6852Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T01:49:53.222912Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv COPD profiles and treatable traits using minimal resources: Identification, decision tree and stability over time
title COPD profiles and treatable traits using minimal resources: Identification, decision tree and stability over time
spellingShingle COPD profiles and treatable traits using minimal resources: Identification, decision tree and stability over time
Marques, Alda
Phenotype
Cluster analysis
Treatable traits
Decision trees
COPD
title_short COPD profiles and treatable traits using minimal resources: Identification, decision tree and stability over time
title_full COPD profiles and treatable traits using minimal resources: Identification, decision tree and stability over time
title_fullStr COPD profiles and treatable traits using minimal resources: Identification, decision tree and stability over time
title_full_unstemmed COPD profiles and treatable traits using minimal resources: Identification, decision tree and stability over time
title_sort COPD profiles and treatable traits using minimal resources: Identification, decision tree and stability over time
author Marques, Alda
author_facet Marques, Alda
Souto-Miranda, Sara
Machado, Ana
Oliveira, Ana
Jácome, Cristina
Cruz, Joana
Enes, Vera
Afreixo, Vera
Martins, Vitória
Andrade, Lília
Valente, Carla
Ferreira, Diva
Simão, Paula
Brooks, Dina
Tavares, Ana Helena
author_role author
author2 Souto-Miranda, Sara
Machado, Ana
Oliveira, Ana
Jácome, Cristina
Cruz, Joana
Enes, Vera
Afreixo, Vera
Martins, Vitória
Andrade, Lília
Valente, Carla
Ferreira, Diva
Simão, Paula
Brooks, Dina
Tavares, Ana Helena
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv IC-Online
dc.contributor.author.fl_str_mv Marques, Alda
Souto-Miranda, Sara
Machado, Ana
Oliveira, Ana
Jácome, Cristina
Cruz, Joana
Enes, Vera
Afreixo, Vera
Martins, Vitória
Andrade, Lília
Valente, Carla
Ferreira, Diva
Simão, Paula
Brooks, Dina
Tavares, Ana Helena
dc.subject.por.fl_str_mv Phenotype
Cluster analysis
Treatable traits
Decision trees
COPD
topic Phenotype
Cluster analysis
Treatable traits
Decision trees
COPD
description Background and objective: Profiles of people with chronic obstructive pulmonary disease (COPD) often do not describe treatable traits, lack validation and/or their stability over time is unknown. We aimed to identify COPD profiles and their treatable traits based on simple and meaningful measures; to develop and validate a decision tree and to explore profile stability over time. Methods: An observational, prospective study was conducted. Clinical characteristics, lung function, symptoms, impact of the disease (COPD Assessment Test—CAT), health-related quality of life, physical activity, lower-limb muscle strength and functional status were collected cross-sectionally and a subsample was followed-up monthly over six months. A principal component analysis and a clustering procedure with k-medoids were applied to identify profiles. A decision tree was developed and validated cross-sectionally. Stability was explored over time with the ratio between the number of timepoints that a participant was classified in the same profile and the total number of timepoints (i.e., 6). Results: 352 people with COPD (67.4 ± 9.9 years; 78.1% male; FEV1 = 56.2 ± 20.6% predicted) participated and 90 (67.6 ± 8.9 years; 85.6% male; FEV1 = 52.1 ± 19.9% predicted) were followed-up. Four profiles were identified with distinct treatable traits. The decision tree included CAT (< 18 or ≥ 18 points); age (< 65 or ≥ 65 years) and FEV1 (< 48 or ≥ 48% predicted) and had an agreement of 71.7% (Cohen’s Kappa = 0.62, p < 0.001) with the actual profiles. 48.9% of participants remained in the same profile whilst 51.1% moved between two (47.8%) or three (3.3%) profiles over time. Overall stability was 86.8 ± 15%. Conclusion: Four profiles and treatable traits were identified with simple and meaningful measures possibly available in low-resource settings. A decision tree with three commonly used variables in the routine assessment of people with COPD is now available for quick allocation to the identified profiles in clinical practice. Profiles and treatable traits may change over time in people with COPD hence, regular assessments to deliver goal-targeted personalised treatments are needed.
publishDate 2022
dc.date.none.fl_str_mv 2022-03-28T13:04:06Z
2022-02-14
2022-02-14T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.8/6852
url http://hdl.handle.net/10400.8/6852
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Marques, A., Souto-Miranda, S., Machado, A. et al. COPD profiles and treatable traits using minimal resources: identification, decision tree and stability over time. Respir Res 23, 30 (2022). https://doi.org/10.1186/s12931-022-01954-6
10.1186/s12931-022-01954-6
1465-993X
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dc.publisher.none.fl_str_mv BMC
publisher.none.fl_str_mv BMC
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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