A deep learning method for predicting the COVID-19 ICU patient outcome fusing X-rays, respiratory sounds, and ICU parameters

Detalhes bibliográficos
Autor(a) principal: Wu, Yunan
Data de Publicação: 2024
Outros Autores: Rocha, Bruno Machado, Kaimakamis, Evangelos, Cheimariotis, Grigorios-Aris, Petmezas, Georgios, Chatzis, Evangelos, Kilintzis, Vassilis, Stefanopoulos, Leandros, Pessoa, Diogo, Marques, Alda, Carvalho, Paulo, Paiva, Rui Pedro, Kotoulas, Serafeim, Bitzani, Militsa, Katsaggelos, Aggelos K., Maglaveras, Nicos
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10773/39320
Resumo: Assessing the health status of critically ill patients with COVID-19 and predicting their outcome are highly challenging problems and one of the reasons for poor management of ICU resources worldwide. A better pathophysiological understanding of patients’ state evolution in the ICU can enhance effective medical interventions. Therefore, there is a need to monitor and analyze the pulmonary function of a ICU patient with COVID-19 and its impact on cardiovascular and other systems. To achieve this, chest X-rays (CXRs), respiratory sounds and all the routinely monitored parameters, scores and metrics in the COVID-19 ICU were recorded from 171 ICU patients with COVID-19 from June 2020 until December 2021. Features were extracted from respiratory sounds, deep learning analysis was conducted on CXRs, and logistic regression analysis was performed on routine ICU clinical variables. Deep learning pipelines were established to classify patients’ outcomes (survival or death) at two time points (ICU mortality or 90-day mortality) using three input configurations: (a) CXRs, (b) a fusion of CXRs and respiratory sounds features, or (c) a fusion of CXRs, respiratory sounds features, and principal features of the ICU clinical measurements. The performance of the latter approach was promising, achieving, for ICU mortality, an accuracy of 0.761 and an AUC of 0.759, and for 90-day mortality, an accuracy of 0.743 and an AUC of 0.752, while the performance of approaches (a) and (b) was worse. Therefore, using multi-source data and longitudinal COVID-19 ICU data offers a better prediction of the outcome in the ICU, thereby optimizing medical decisions and interventions. Furthermore, we show that adding the adventitious respiratory sounds features significantly increased AUC and accuracy for mortality prediction of ICU patients with COVID-19.
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spelling A deep learning method for predicting the COVID-19 ICU patient outcome fusing X-rays, respiratory sounds, and ICU parametersCOVID-19Deep learning fusionRespiratory soundsClinical variablesChest X-raysICU mortalityAssessing the health status of critically ill patients with COVID-19 and predicting their outcome are highly challenging problems and one of the reasons for poor management of ICU resources worldwide. A better pathophysiological understanding of patients’ state evolution in the ICU can enhance effective medical interventions. Therefore, there is a need to monitor and analyze the pulmonary function of a ICU patient with COVID-19 and its impact on cardiovascular and other systems. To achieve this, chest X-rays (CXRs), respiratory sounds and all the routinely monitored parameters, scores and metrics in the COVID-19 ICU were recorded from 171 ICU patients with COVID-19 from June 2020 until December 2021. Features were extracted from respiratory sounds, deep learning analysis was conducted on CXRs, and logistic regression analysis was performed on routine ICU clinical variables. Deep learning pipelines were established to classify patients’ outcomes (survival or death) at two time points (ICU mortality or 90-day mortality) using three input configurations: (a) CXRs, (b) a fusion of CXRs and respiratory sounds features, or (c) a fusion of CXRs, respiratory sounds features, and principal features of the ICU clinical measurements. The performance of the latter approach was promising, achieving, for ICU mortality, an accuracy of 0.761 and an AUC of 0.759, and for 90-day mortality, an accuracy of 0.743 and an AUC of 0.752, while the performance of approaches (a) and (b) was worse. Therefore, using multi-source data and longitudinal COVID-19 ICU data offers a better prediction of the outcome in the ICU, thereby optimizing medical decisions and interventions. Furthermore, we show that adding the adventitious respiratory sounds features significantly increased AUC and accuracy for mortality prediction of ICU patients with COVID-19.Elsevier2024-012024-01-01T00:00:00Z2026-01-31T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10773/39320eng0957-417410.1016/j.eswa.2023.121089Wu, YunanRocha, Bruno MachadoKaimakamis, EvangelosCheimariotis, Grigorios-ArisPetmezas, GeorgiosChatzis, EvangelosKilintzis, VassilisStefanopoulos, LeandrosPessoa, DiogoMarques, AldaCarvalho, PauloPaiva, Rui PedroKotoulas, SerafeimBitzani, MilitsaKatsaggelos, Aggelos K.Maglaveras, Nicosinfo:eu-repo/semantics/embargoedAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-02-22T12:16:40Zoai:ria.ua.pt:10773/39320Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T03:09:29.038946Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv A deep learning method for predicting the COVID-19 ICU patient outcome fusing X-rays, respiratory sounds, and ICU parameters
title A deep learning method for predicting the COVID-19 ICU patient outcome fusing X-rays, respiratory sounds, and ICU parameters
spellingShingle A deep learning method for predicting the COVID-19 ICU patient outcome fusing X-rays, respiratory sounds, and ICU parameters
Wu, Yunan
COVID-19
Deep learning fusion
Respiratory sounds
Clinical variables
Chest X-rays
ICU mortality
title_short A deep learning method for predicting the COVID-19 ICU patient outcome fusing X-rays, respiratory sounds, and ICU parameters
title_full A deep learning method for predicting the COVID-19 ICU patient outcome fusing X-rays, respiratory sounds, and ICU parameters
title_fullStr A deep learning method for predicting the COVID-19 ICU patient outcome fusing X-rays, respiratory sounds, and ICU parameters
title_full_unstemmed A deep learning method for predicting the COVID-19 ICU patient outcome fusing X-rays, respiratory sounds, and ICU parameters
title_sort A deep learning method for predicting the COVID-19 ICU patient outcome fusing X-rays, respiratory sounds, and ICU parameters
author Wu, Yunan
author_facet Wu, Yunan
Rocha, Bruno Machado
Kaimakamis, Evangelos
Cheimariotis, Grigorios-Aris
Petmezas, Georgios
Chatzis, Evangelos
Kilintzis, Vassilis
Stefanopoulos, Leandros
Pessoa, Diogo
Marques, Alda
Carvalho, Paulo
Paiva, Rui Pedro
Kotoulas, Serafeim
Bitzani, Militsa
Katsaggelos, Aggelos K.
Maglaveras, Nicos
author_role author
author2 Rocha, Bruno Machado
Kaimakamis, Evangelos
Cheimariotis, Grigorios-Aris
Petmezas, Georgios
Chatzis, Evangelos
Kilintzis, Vassilis
Stefanopoulos, Leandros
Pessoa, Diogo
Marques, Alda
Carvalho, Paulo
Paiva, Rui Pedro
Kotoulas, Serafeim
Bitzani, Militsa
Katsaggelos, Aggelos K.
Maglaveras, Nicos
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Wu, Yunan
Rocha, Bruno Machado
Kaimakamis, Evangelos
Cheimariotis, Grigorios-Aris
Petmezas, Georgios
Chatzis, Evangelos
Kilintzis, Vassilis
Stefanopoulos, Leandros
Pessoa, Diogo
Marques, Alda
Carvalho, Paulo
Paiva, Rui Pedro
Kotoulas, Serafeim
Bitzani, Militsa
Katsaggelos, Aggelos K.
Maglaveras, Nicos
dc.subject.por.fl_str_mv COVID-19
Deep learning fusion
Respiratory sounds
Clinical variables
Chest X-rays
ICU mortality
topic COVID-19
Deep learning fusion
Respiratory sounds
Clinical variables
Chest X-rays
ICU mortality
description Assessing the health status of critically ill patients with COVID-19 and predicting their outcome are highly challenging problems and one of the reasons for poor management of ICU resources worldwide. A better pathophysiological understanding of patients’ state evolution in the ICU can enhance effective medical interventions. Therefore, there is a need to monitor and analyze the pulmonary function of a ICU patient with COVID-19 and its impact on cardiovascular and other systems. To achieve this, chest X-rays (CXRs), respiratory sounds and all the routinely monitored parameters, scores and metrics in the COVID-19 ICU were recorded from 171 ICU patients with COVID-19 from June 2020 until December 2021. Features were extracted from respiratory sounds, deep learning analysis was conducted on CXRs, and logistic regression analysis was performed on routine ICU clinical variables. Deep learning pipelines were established to classify patients’ outcomes (survival or death) at two time points (ICU mortality or 90-day mortality) using three input configurations: (a) CXRs, (b) a fusion of CXRs and respiratory sounds features, or (c) a fusion of CXRs, respiratory sounds features, and principal features of the ICU clinical measurements. The performance of the latter approach was promising, achieving, for ICU mortality, an accuracy of 0.761 and an AUC of 0.759, and for 90-day mortality, an accuracy of 0.743 and an AUC of 0.752, while the performance of approaches (a) and (b) was worse. Therefore, using multi-source data and longitudinal COVID-19 ICU data offers a better prediction of the outcome in the ICU, thereby optimizing medical decisions and interventions. Furthermore, we show that adding the adventitious respiratory sounds features significantly increased AUC and accuracy for mortality prediction of ICU patients with COVID-19.
publishDate 2024
dc.date.none.fl_str_mv 2024-01
2024-01-01T00:00:00Z
2026-01-31T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10773/39320
url http://hdl.handle.net/10773/39320
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 0957-4174
10.1016/j.eswa.2023.121089
dc.rights.driver.fl_str_mv info:eu-repo/semantics/embargoedAccess
eu_rights_str_mv embargoedAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Elsevier
publisher.none.fl_str_mv Elsevier
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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