WGS analysis and molecular resistance mechanisms of azithromycin-resistant (MIC >2 mg/L) Neisseria gonorrhoeae isolates in Europe from 2009 to 2014

Detalhes bibliográficos
Autor(a) principal: Jacobsson, Susanne
Data de Publicação: 2016
Outros Autores: Golparian, Daniel, Cole, Michelle, Spiteri, Gianfranco, Martin, Irene, Bergheim, Thea, Borrego, Maria José, Crowley, Brendan, Crucitti, Tania, Van Dam, Alje P., Hoffmann, Steen, Jeverica, Samo, Kohl, Peter, Mlynarczyk-Bonikowska, Beata, Pakarna, Gatis, Stary, Angelika, Stefanelli, Paola, Pavlik, Peter, Tzelepi, Eva, Abad, Raquel, Harris, Simon R., Unemo, Magnus
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.18/4543
Resumo: OBJECTIVES: To elucidate the genome-based epidemiology and phylogenomics of azithromycin-resistant (MIC >2 mg/L) Neisseria gonorrhoeae strains collected in 2009-14 in Europe and clarify the azithromycin resistance mechanisms. METHODS: Seventy-five azithromycin-resistant (MIC 4 to >256 mg/L) N. gonorrhoeae isolates collected in 17 European countries during 2009-14 were examined using antimicrobial susceptibility testing and WGS. RESULTS: Thirty-six N. gonorrhoeae multi-antigen sequence typing STs and five phylogenomic clades, including 4-22 isolates from several countries per clade, were identified. The azithromycin target mutation A2059G (Escherichia coli numbering) was found in all four alleles of the 23S rRNA gene in all isolates with high-level azithromycin resistance (n = 4; MIC ≥256 mg/L). The C2611T mutation was identified in two to four alleles of the 23S rRNA gene in the remaining 71 isolates. Mutations in mtrR and its promoter were identified in 43 isolates, comprising isolates within the whole azithromycin MIC range. No mutations associated with azithromycin resistance were found in the rplD gene or the rplV gene and none of the macrolide resistance-associated genes [mef(A/E), ere(A), ere(B), erm(A), erm(B), erm(C) and erm(F)] were identified in any isolate. CONCLUSIONS: Clonal spread of relatively few N. gonorrhoeae strains accounts for the majority of the azithromycin resistance (MIC >2 mg/L) in Europe. The four isolates with high-level resistance to azithromycin (MIC ≥256 mg/L) were widely separated in the phylogenomic tree and did not belong to any of the main clades. The main azithromycin resistance mechanisms were the A2059G mutation (high-level resistance) and the C2611T mutation (low- and moderate-level resistance) in the 23S rRNA gene.
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spelling WGS analysis and molecular resistance mechanisms of azithromycin-resistant (MIC >2 mg/L) Neisseria gonorrhoeae isolates in Europe from 2009 to 2014Azithromycin-resistantNeisseria gonorrhoeaeEuropeAllelesAzithromycinMutationAntimicrobial Susceptibility TestInfecções Sexualmente TransmissíveisOBJECTIVES: To elucidate the genome-based epidemiology and phylogenomics of azithromycin-resistant (MIC >2 mg/L) Neisseria gonorrhoeae strains collected in 2009-14 in Europe and clarify the azithromycin resistance mechanisms. METHODS: Seventy-five azithromycin-resistant (MIC 4 to >256 mg/L) N. gonorrhoeae isolates collected in 17 European countries during 2009-14 were examined using antimicrobial susceptibility testing and WGS. RESULTS: Thirty-six N. gonorrhoeae multi-antigen sequence typing STs and five phylogenomic clades, including 4-22 isolates from several countries per clade, were identified. The azithromycin target mutation A2059G (Escherichia coli numbering) was found in all four alleles of the 23S rRNA gene in all isolates with high-level azithromycin resistance (n = 4; MIC ≥256 mg/L). The C2611T mutation was identified in two to four alleles of the 23S rRNA gene in the remaining 71 isolates. Mutations in mtrR and its promoter were identified in 43 isolates, comprising isolates within the whole azithromycin MIC range. No mutations associated with azithromycin resistance were found in the rplD gene or the rplV gene and none of the macrolide resistance-associated genes [mef(A/E), ere(A), ere(B), erm(A), erm(B), erm(C) and erm(F)] were identified in any isolate. CONCLUSIONS: Clonal spread of relatively few N. gonorrhoeae strains accounts for the majority of the azithromycin resistance (MIC >2 mg/L) in Europe. The four isolates with high-level resistance to azithromycin (MIC ≥256 mg/L) were widely separated in the phylogenomic tree and did not belong to any of the main clades. The main azithromycin resistance mechanisms were the A2059G mutation (high-level resistance) and the C2611T mutation (low- and moderate-level resistance) in the 23S rRNA gene.The present work was supported by grants from theO¨ rebro County Council Research Committee and the Foundation for Medical Research at O¨ rebro University Hospital, SwedenOxford University Press/ British Society for Antimicrobial ChemotherapyRepositório Científico do Instituto Nacional de SaúdeJacobsson, SusanneGolparian, DanielCole, MichelleSpiteri, GianfrancoMartin, IreneBergheim, TheaBorrego, Maria JoséCrowley, BrendanCrucitti, TaniaVan Dam, Alje P.Hoffmann, SteenJeverica, SamoKohl, PeterMlynarczyk-Bonikowska, BeataPakarna, GatisStary, AngelikaStefanelli, PaolaPavlik, PeterTzelepi, EvaAbad, RaquelHarris, Simon R.Unemo, Magnus2017-03-07T15:06:32Z2016-112016-11-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.18/4543engJ Antimicrob Chemother. 2016 Nov;71(11):3109-3116. Epub 2016 Jul 170305-745310.1093/jac/dkw279info:eu-repo/semantics/embargoedAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-20T15:40:23Zoai:repositorio.insa.pt:10400.18/4543Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T18:39:19.434332Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv WGS analysis and molecular resistance mechanisms of azithromycin-resistant (MIC >2 mg/L) Neisseria gonorrhoeae isolates in Europe from 2009 to 2014
title WGS analysis and molecular resistance mechanisms of azithromycin-resistant (MIC >2 mg/L) Neisseria gonorrhoeae isolates in Europe from 2009 to 2014
spellingShingle WGS analysis and molecular resistance mechanisms of azithromycin-resistant (MIC >2 mg/L) Neisseria gonorrhoeae isolates in Europe from 2009 to 2014
Jacobsson, Susanne
Azithromycin-resistant
Neisseria gonorrhoeae
Europe
Alleles
Azithromycin
Mutation
Antimicrobial Susceptibility Test
Infecções Sexualmente Transmissíveis
title_short WGS analysis and molecular resistance mechanisms of azithromycin-resistant (MIC >2 mg/L) Neisseria gonorrhoeae isolates in Europe from 2009 to 2014
title_full WGS analysis and molecular resistance mechanisms of azithromycin-resistant (MIC >2 mg/L) Neisseria gonorrhoeae isolates in Europe from 2009 to 2014
title_fullStr WGS analysis and molecular resistance mechanisms of azithromycin-resistant (MIC >2 mg/L) Neisseria gonorrhoeae isolates in Europe from 2009 to 2014
title_full_unstemmed WGS analysis and molecular resistance mechanisms of azithromycin-resistant (MIC >2 mg/L) Neisseria gonorrhoeae isolates in Europe from 2009 to 2014
title_sort WGS analysis and molecular resistance mechanisms of azithromycin-resistant (MIC >2 mg/L) Neisseria gonorrhoeae isolates in Europe from 2009 to 2014
author Jacobsson, Susanne
author_facet Jacobsson, Susanne
Golparian, Daniel
Cole, Michelle
Spiteri, Gianfranco
Martin, Irene
Bergheim, Thea
Borrego, Maria José
Crowley, Brendan
Crucitti, Tania
Van Dam, Alje P.
Hoffmann, Steen
Jeverica, Samo
Kohl, Peter
Mlynarczyk-Bonikowska, Beata
Pakarna, Gatis
Stary, Angelika
Stefanelli, Paola
Pavlik, Peter
Tzelepi, Eva
Abad, Raquel
Harris, Simon R.
Unemo, Magnus
author_role author
author2 Golparian, Daniel
Cole, Michelle
Spiteri, Gianfranco
Martin, Irene
Bergheim, Thea
Borrego, Maria José
Crowley, Brendan
Crucitti, Tania
Van Dam, Alje P.
Hoffmann, Steen
Jeverica, Samo
Kohl, Peter
Mlynarczyk-Bonikowska, Beata
Pakarna, Gatis
Stary, Angelika
Stefanelli, Paola
Pavlik, Peter
Tzelepi, Eva
Abad, Raquel
Harris, Simon R.
Unemo, Magnus
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Repositório Científico do Instituto Nacional de Saúde
dc.contributor.author.fl_str_mv Jacobsson, Susanne
Golparian, Daniel
Cole, Michelle
Spiteri, Gianfranco
Martin, Irene
Bergheim, Thea
Borrego, Maria José
Crowley, Brendan
Crucitti, Tania
Van Dam, Alje P.
Hoffmann, Steen
Jeverica, Samo
Kohl, Peter
Mlynarczyk-Bonikowska, Beata
Pakarna, Gatis
Stary, Angelika
Stefanelli, Paola
Pavlik, Peter
Tzelepi, Eva
Abad, Raquel
Harris, Simon R.
Unemo, Magnus
dc.subject.por.fl_str_mv Azithromycin-resistant
Neisseria gonorrhoeae
Europe
Alleles
Azithromycin
Mutation
Antimicrobial Susceptibility Test
Infecções Sexualmente Transmissíveis
topic Azithromycin-resistant
Neisseria gonorrhoeae
Europe
Alleles
Azithromycin
Mutation
Antimicrobial Susceptibility Test
Infecções Sexualmente Transmissíveis
description OBJECTIVES: To elucidate the genome-based epidemiology and phylogenomics of azithromycin-resistant (MIC >2 mg/L) Neisseria gonorrhoeae strains collected in 2009-14 in Europe and clarify the azithromycin resistance mechanisms. METHODS: Seventy-five azithromycin-resistant (MIC 4 to >256 mg/L) N. gonorrhoeae isolates collected in 17 European countries during 2009-14 were examined using antimicrobial susceptibility testing and WGS. RESULTS: Thirty-six N. gonorrhoeae multi-antigen sequence typing STs and five phylogenomic clades, including 4-22 isolates from several countries per clade, were identified. The azithromycin target mutation A2059G (Escherichia coli numbering) was found in all four alleles of the 23S rRNA gene in all isolates with high-level azithromycin resistance (n = 4; MIC ≥256 mg/L). The C2611T mutation was identified in two to four alleles of the 23S rRNA gene in the remaining 71 isolates. Mutations in mtrR and its promoter were identified in 43 isolates, comprising isolates within the whole azithromycin MIC range. No mutations associated with azithromycin resistance were found in the rplD gene or the rplV gene and none of the macrolide resistance-associated genes [mef(A/E), ere(A), ere(B), erm(A), erm(B), erm(C) and erm(F)] were identified in any isolate. CONCLUSIONS: Clonal spread of relatively few N. gonorrhoeae strains accounts for the majority of the azithromycin resistance (MIC >2 mg/L) in Europe. The four isolates with high-level resistance to azithromycin (MIC ≥256 mg/L) were widely separated in the phylogenomic tree and did not belong to any of the main clades. The main azithromycin resistance mechanisms were the A2059G mutation (high-level resistance) and the C2611T mutation (low- and moderate-level resistance) in the 23S rRNA gene.
publishDate 2016
dc.date.none.fl_str_mv 2016-11
2016-11-01T00:00:00Z
2017-03-07T15:06:32Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.18/4543
url http://hdl.handle.net/10400.18/4543
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv J Antimicrob Chemother. 2016 Nov;71(11):3109-3116. Epub 2016 Jul 17
0305-7453
10.1093/jac/dkw279
dc.rights.driver.fl_str_mv info:eu-repo/semantics/embargoedAccess
eu_rights_str_mv embargoedAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Oxford University Press/ British Society for Antimicrobial Chemotherapy
publisher.none.fl_str_mv Oxford University Press/ British Society for Antimicrobial Chemotherapy
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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