Exploring anti-quorum sensing and anti-virulence based strategies to fight Candida albicans infections: an in silico approach

Detalhes bibliográficos
Autor(a) principal: Graínha, Tânia Raquel Rodrigues
Data de Publicação: 2018
Outros Autores: Jorge, Paula Alexandra Silva, Pérez-Pérez, Martín, Rodríguez, Gael Pérez, Pereira, Maria Olívia, Lourenço, Anália Maria Garcia
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/1822/59514
Resumo: The complex virulence attributes of Candida albicans are an attractive target to exploit in the development of new antifungals and anti-virulence strategies to combat C. albicans infections. Particularly, quorum-sensing (QS) has been reported as critical for virulence regulation in C. albicans. This work presents two knowledge networks with up-to-date information about QS regulation and experimentally tested anti-QS and anti-virulence agents for C. albicans. A semi-automatic bioinformatics workflow that combines literature mining and expert curation was used to retrieve otherwise scattered information from the scientific literature. The network representation offers an innovative and continuously updatable means for the Candida research community to query QS and virulence data systematically and in a user-friendly way. Notably, the reconstructed networks show the complexity of QS regulation and the impact that some molecules have on the inhibition of virulence mechanisms responsible for infection establishment (e.g. hyphal development) and perseverance (e.g. biofilm formation). In the future, the compiled knowledge may be used to build decision-making models that help infer new knowledge of practical significance. The knowledge networks are publicly available at http://pcquorum.org/. This Web platform enables the exploration of fungal virulence cues as well as reported inhibitors in a user-friendly fashion.
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spelling Exploring anti-quorum sensing and anti-virulence based strategies to fight Candida albicans infections: an in silico approachCandida albicansInfectionVirulence factorsQuorum sensingLiterature miningScience & TechnologyThe complex virulence attributes of Candida albicans are an attractive target to exploit in the development of new antifungals and anti-virulence strategies to combat C. albicans infections. Particularly, quorum-sensing (QS) has been reported as critical for virulence regulation in C. albicans. This work presents two knowledge networks with up-to-date information about QS regulation and experimentally tested anti-QS and anti-virulence agents for C. albicans. A semi-automatic bioinformatics workflow that combines literature mining and expert curation was used to retrieve otherwise scattered information from the scientific literature. The network representation offers an innovative and continuously updatable means for the Candida research community to query QS and virulence data systematically and in a user-friendly way. Notably, the reconstructed networks show the complexity of QS regulation and the impact that some molecules have on the inhibition of virulence mechanisms responsible for infection establishment (e.g. hyphal development) and perseverance (e.g. biofilm formation). In the future, the compiled knowledge may be used to build decision-making models that help infer new knowledge of practical significance. The knowledge networks are publicly available at http://pcquorum.org/. This Web platform enables the exploration of fungal virulence cues as well as reported inhibitors in a user-friendly fashion.This work was supported by the European Society of Clinical Microbiology and Infectious Diseases (ESCMID) [Research Grant 2014 of Analia Lourenc¸o], the Portuguese Foundation for Sci- ´ ence and Technology (FCT) under the scope of the strategic funding of UID/BIO/04469/2013 unit and COMPETE 2020 (POCI01-0145-FEDER-006684) and BioTecNorte operation ( NORTE01-0145-FEDER-000004) funded by the European Regional Development Fund under the scope of Norte2020—Programa Operacional Regional do Norte. MP and GPR were supported by pre-doctoral fellowships from the Xunta de Galicia.info:eu-repo/semantics/publishedVersionOxford University PressUniversidade do MinhoGraínha, Tânia Raquel RodriguesJorge, Paula Alexandra SilvaPérez-Pérez, MartínRodríguez, Gael PérezPereira, Maria OlíviaLourenço, Anália Maria Garcia20182018-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/1822/59514engGrainha, Tânia; Jorge, Paula; Pérez-Pérez, Martín; Rodríguez, Gael Pérez; Pereira, Maria Olívia; Lourenço, Anália, Exploring anti-quorum sensing and anti-virulence based strategies to fight Candida albicans infections: an in silico approach. FEMS Yeast Research, 18(3), foy022, 20181567-13641567-13561567-136410.1093/femsyr/foy02229518242http://femsyr.oxfordjournals.org/info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:44:56Zoai:repositorium.sdum.uminho.pt:1822/59514Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:42:44.149479Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Exploring anti-quorum sensing and anti-virulence based strategies to fight Candida albicans infections: an in silico approach
title Exploring anti-quorum sensing and anti-virulence based strategies to fight Candida albicans infections: an in silico approach
spellingShingle Exploring anti-quorum sensing and anti-virulence based strategies to fight Candida albicans infections: an in silico approach
Graínha, Tânia Raquel Rodrigues
Candida albicans
Infection
Virulence factors
Quorum sensing
Literature mining
Science & Technology
title_short Exploring anti-quorum sensing and anti-virulence based strategies to fight Candida albicans infections: an in silico approach
title_full Exploring anti-quorum sensing and anti-virulence based strategies to fight Candida albicans infections: an in silico approach
title_fullStr Exploring anti-quorum sensing and anti-virulence based strategies to fight Candida albicans infections: an in silico approach
title_full_unstemmed Exploring anti-quorum sensing and anti-virulence based strategies to fight Candida albicans infections: an in silico approach
title_sort Exploring anti-quorum sensing and anti-virulence based strategies to fight Candida albicans infections: an in silico approach
author Graínha, Tânia Raquel Rodrigues
author_facet Graínha, Tânia Raquel Rodrigues
Jorge, Paula Alexandra Silva
Pérez-Pérez, Martín
Rodríguez, Gael Pérez
Pereira, Maria Olívia
Lourenço, Anália Maria Garcia
author_role author
author2 Jorge, Paula Alexandra Silva
Pérez-Pérez, Martín
Rodríguez, Gael Pérez
Pereira, Maria Olívia
Lourenço, Anália Maria Garcia
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv Graínha, Tânia Raquel Rodrigues
Jorge, Paula Alexandra Silva
Pérez-Pérez, Martín
Rodríguez, Gael Pérez
Pereira, Maria Olívia
Lourenço, Anália Maria Garcia
dc.subject.por.fl_str_mv Candida albicans
Infection
Virulence factors
Quorum sensing
Literature mining
Science & Technology
topic Candida albicans
Infection
Virulence factors
Quorum sensing
Literature mining
Science & Technology
description The complex virulence attributes of Candida albicans are an attractive target to exploit in the development of new antifungals and anti-virulence strategies to combat C. albicans infections. Particularly, quorum-sensing (QS) has been reported as critical for virulence regulation in C. albicans. This work presents two knowledge networks with up-to-date information about QS regulation and experimentally tested anti-QS and anti-virulence agents for C. albicans. A semi-automatic bioinformatics workflow that combines literature mining and expert curation was used to retrieve otherwise scattered information from the scientific literature. The network representation offers an innovative and continuously updatable means for the Candida research community to query QS and virulence data systematically and in a user-friendly way. Notably, the reconstructed networks show the complexity of QS regulation and the impact that some molecules have on the inhibition of virulence mechanisms responsible for infection establishment (e.g. hyphal development) and perseverance (e.g. biofilm formation). In the future, the compiled knowledge may be used to build decision-making models that help infer new knowledge of practical significance. The knowledge networks are publicly available at http://pcquorum.org/. This Web platform enables the exploration of fungal virulence cues as well as reported inhibitors in a user-friendly fashion.
publishDate 2018
dc.date.none.fl_str_mv 2018
2018-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/1822/59514
url http://hdl.handle.net/1822/59514
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Grainha, Tânia; Jorge, Paula; Pérez-Pérez, Martín; Rodríguez, Gael Pérez; Pereira, Maria Olívia; Lourenço, Anália, Exploring anti-quorum sensing and anti-virulence based strategies to fight Candida albicans infections: an in silico approach. FEMS Yeast Research, 18(3), foy022, 2018
1567-1364
1567-1356
1567-1364
10.1093/femsyr/foy022
29518242
http://femsyr.oxfordjournals.org/
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Oxford University Press
publisher.none.fl_str_mv Oxford University Press
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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