Exploring anti-quorum sensing and anti-virulence based strategies to fight Candida albicans infections: an in silico approach
Autor(a) principal: | |
---|---|
Data de Publicação: | 2018 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/1822/59514 |
Resumo: | The complex virulence attributes of Candida albicans are an attractive target to exploit in the development of new antifungals and anti-virulence strategies to combat C. albicans infections. Particularly, quorum-sensing (QS) has been reported as critical for virulence regulation in C. albicans. This work presents two knowledge networks with up-to-date information about QS regulation and experimentally tested anti-QS and anti-virulence agents for C. albicans. A semi-automatic bioinformatics workflow that combines literature mining and expert curation was used to retrieve otherwise scattered information from the scientific literature. The network representation offers an innovative and continuously updatable means for the Candida research community to query QS and virulence data systematically and in a user-friendly way. Notably, the reconstructed networks show the complexity of QS regulation and the impact that some molecules have on the inhibition of virulence mechanisms responsible for infection establishment (e.g. hyphal development) and perseverance (e.g. biofilm formation). In the future, the compiled knowledge may be used to build decision-making models that help infer new knowledge of practical significance. The knowledge networks are publicly available at http://pcquorum.org/. This Web platform enables the exploration of fungal virulence cues as well as reported inhibitors in a user-friendly fashion. |
id |
RCAP_70550baa5ae89b02390eeaffeb8d9c65 |
---|---|
oai_identifier_str |
oai:repositorium.sdum.uminho.pt:1822/59514 |
network_acronym_str |
RCAP |
network_name_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository_id_str |
7160 |
spelling |
Exploring anti-quorum sensing and anti-virulence based strategies to fight Candida albicans infections: an in silico approachCandida albicansInfectionVirulence factorsQuorum sensingLiterature miningScience & TechnologyThe complex virulence attributes of Candida albicans are an attractive target to exploit in the development of new antifungals and anti-virulence strategies to combat C. albicans infections. Particularly, quorum-sensing (QS) has been reported as critical for virulence regulation in C. albicans. This work presents two knowledge networks with up-to-date information about QS regulation and experimentally tested anti-QS and anti-virulence agents for C. albicans. A semi-automatic bioinformatics workflow that combines literature mining and expert curation was used to retrieve otherwise scattered information from the scientific literature. The network representation offers an innovative and continuously updatable means for the Candida research community to query QS and virulence data systematically and in a user-friendly way. Notably, the reconstructed networks show the complexity of QS regulation and the impact that some molecules have on the inhibition of virulence mechanisms responsible for infection establishment (e.g. hyphal development) and perseverance (e.g. biofilm formation). In the future, the compiled knowledge may be used to build decision-making models that help infer new knowledge of practical significance. The knowledge networks are publicly available at http://pcquorum.org/. This Web platform enables the exploration of fungal virulence cues as well as reported inhibitors in a user-friendly fashion.This work was supported by the European Society of Clinical Microbiology and Infectious Diseases (ESCMID) [Research Grant 2014 of Analia Lourenc¸o], the Portuguese Foundation for Sci- ´ ence and Technology (FCT) under the scope of the strategic funding of UID/BIO/04469/2013 unit and COMPETE 2020 (POCI01-0145-FEDER-006684) and BioTecNorte operation ( NORTE01-0145-FEDER-000004) funded by the European Regional Development Fund under the scope of Norte2020—Programa Operacional Regional do Norte. MP and GPR were supported by pre-doctoral fellowships from the Xunta de Galicia.info:eu-repo/semantics/publishedVersionOxford University PressUniversidade do MinhoGraínha, Tânia Raquel RodriguesJorge, Paula Alexandra SilvaPérez-Pérez, MartínRodríguez, Gael PérezPereira, Maria OlíviaLourenço, Anália Maria Garcia20182018-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/1822/59514engGrainha, Tânia; Jorge, Paula; Pérez-Pérez, Martín; Rodríguez, Gael Pérez; Pereira, Maria Olívia; Lourenço, Anália, Exploring anti-quorum sensing and anti-virulence based strategies to fight Candida albicans infections: an in silico approach. FEMS Yeast Research, 18(3), foy022, 20181567-13641567-13561567-136410.1093/femsyr/foy02229518242http://femsyr.oxfordjournals.org/info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:44:56Zoai:repositorium.sdum.uminho.pt:1822/59514Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:42:44.149479Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Exploring anti-quorum sensing and anti-virulence based strategies to fight Candida albicans infections: an in silico approach |
title |
Exploring anti-quorum sensing and anti-virulence based strategies to fight Candida albicans infections: an in silico approach |
spellingShingle |
Exploring anti-quorum sensing and anti-virulence based strategies to fight Candida albicans infections: an in silico approach Graínha, Tânia Raquel Rodrigues Candida albicans Infection Virulence factors Quorum sensing Literature mining Science & Technology |
title_short |
Exploring anti-quorum sensing and anti-virulence based strategies to fight Candida albicans infections: an in silico approach |
title_full |
Exploring anti-quorum sensing and anti-virulence based strategies to fight Candida albicans infections: an in silico approach |
title_fullStr |
Exploring anti-quorum sensing and anti-virulence based strategies to fight Candida albicans infections: an in silico approach |
title_full_unstemmed |
Exploring anti-quorum sensing and anti-virulence based strategies to fight Candida albicans infections: an in silico approach |
title_sort |
Exploring anti-quorum sensing and anti-virulence based strategies to fight Candida albicans infections: an in silico approach |
author |
Graínha, Tânia Raquel Rodrigues |
author_facet |
Graínha, Tânia Raquel Rodrigues Jorge, Paula Alexandra Silva Pérez-Pérez, Martín Rodríguez, Gael Pérez Pereira, Maria Olívia Lourenço, Anália Maria Garcia |
author_role |
author |
author2 |
Jorge, Paula Alexandra Silva Pérez-Pérez, Martín Rodríguez, Gael Pérez Pereira, Maria Olívia Lourenço, Anália Maria Garcia |
author2_role |
author author author author author |
dc.contributor.none.fl_str_mv |
Universidade do Minho |
dc.contributor.author.fl_str_mv |
Graínha, Tânia Raquel Rodrigues Jorge, Paula Alexandra Silva Pérez-Pérez, Martín Rodríguez, Gael Pérez Pereira, Maria Olívia Lourenço, Anália Maria Garcia |
dc.subject.por.fl_str_mv |
Candida albicans Infection Virulence factors Quorum sensing Literature mining Science & Technology |
topic |
Candida albicans Infection Virulence factors Quorum sensing Literature mining Science & Technology |
description |
The complex virulence attributes of Candida albicans are an attractive target to exploit in the development of new antifungals and anti-virulence strategies to combat C. albicans infections. Particularly, quorum-sensing (QS) has been reported as critical for virulence regulation in C. albicans. This work presents two knowledge networks with up-to-date information about QS regulation and experimentally tested anti-QS and anti-virulence agents for C. albicans. A semi-automatic bioinformatics workflow that combines literature mining and expert curation was used to retrieve otherwise scattered information from the scientific literature. The network representation offers an innovative and continuously updatable means for the Candida research community to query QS and virulence data systematically and in a user-friendly way. Notably, the reconstructed networks show the complexity of QS regulation and the impact that some molecules have on the inhibition of virulence mechanisms responsible for infection establishment (e.g. hyphal development) and perseverance (e.g. biofilm formation). In the future, the compiled knowledge may be used to build decision-making models that help infer new knowledge of practical significance. The knowledge networks are publicly available at http://pcquorum.org/. This Web platform enables the exploration of fungal virulence cues as well as reported inhibitors in a user-friendly fashion. |
publishDate |
2018 |
dc.date.none.fl_str_mv |
2018 2018-01-01T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/1822/59514 |
url |
http://hdl.handle.net/1822/59514 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Grainha, Tânia; Jorge, Paula; Pérez-Pérez, Martín; Rodríguez, Gael Pérez; Pereira, Maria Olívia; Lourenço, Anália, Exploring anti-quorum sensing and anti-virulence based strategies to fight Candida albicans infections: an in silico approach. FEMS Yeast Research, 18(3), foy022, 2018 1567-1364 1567-1356 1567-1364 10.1093/femsyr/foy022 29518242 http://femsyr.oxfordjournals.org/ |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Oxford University Press |
publisher.none.fl_str_mv |
Oxford University Press |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
instname_str |
Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
repository.mail.fl_str_mv |
|
_version_ |
1799132981949890560 |