A genetic chronology for the Indian Subcontinent points to heavily sex-biased dispersals

Detalhes bibliográficos
Autor(a) principal: Silva, Marina
Data de Publicação: 2017
Outros Autores: Oliveira, Marisa, Vieira, Daniel, Brandão, Andreia, Rito, Teresa S, Pereira, Joana B., Fraser, Ross M., Hudson, Bob, Gandini, Francesca, Edwards, Ceiridwen, Pala, Maria, Koch, John, Wilson, James F., Pereira, Luísa, Richards, Martin B., Soares, Pedro
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/1822/50717
Resumo: Background: India is a patchwork of tribal and non-tribal populations that speak many different languages from various language families. Indo-European, spoken across northern and central India, and also in Pakistan and Bangladesh, has been frequently connected to the so-called "Indo-Aryan invasions" from Central Asia similar to 3.5 ka and the establishment of the caste system, but the extent of immigration at this time remains extremely controversial. South India, on the other hand, is dominated by Dravidian languages. India displays a high level of endogamy due to its strict social boundaries, and high genetic drift as a result of long-term isolation which, together with a very complex history, makes the genetic study of Indian populations challenging. Results: We have combined a detailed, high-resolution mitogenome analysis with summaries of autosomal data and Y-chromosome lineages to establish a settlement chronology for the Indian Subcontinent. Maternal lineages document the earliest settlement similar to 55-65 ka (thousand years ago), and major population shifts in the later Pleistocene that explain previous dating discrepancies and neutrality violation. Whilst current genome-wide analyses conflate all dispersals from Southwest and Central Asia, we were able to tease out from the mitogenome data distinct dispersal episodes dating from between the Last Glacial Maximum to the Bronze Age. Moreover, we found an extremely marked sex bias by comparing the different genetic systems. Conclusions: Maternal lineages primarily reflect earlier, pre-Holocene processes, and paternal lineages predominantly episodes within the last 10 ka. In particular, genetic influx from Central Asia in the Bronze Age was strongly male-driven, consistent with the patriarchal, patrilocal and patrilineal social structure attributed to the inferred pastoralist early Indo-European society. This was part of a much wider process of Indo-European expansion, with an ultimate source in the Pontic-Caspian region, which carried closely related Y-chromosome lineages, a smaller fraction of autosomal genome-wide variation and an even smaller fraction of mitogenomes across a vast swathe of Eurasia between 5 and 3.5 ka.
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spelling A genetic chronology for the Indian Subcontinent points to heavily sex-biased dispersalsMitochondrial DNAIndian SubcontinentGenome-wideY chromosomeNeolithicIndo-EuropeanCiências Agrárias::Ciências VeterináriasScience & TechnologyBackground: India is a patchwork of tribal and non-tribal populations that speak many different languages from various language families. Indo-European, spoken across northern and central India, and also in Pakistan and Bangladesh, has been frequently connected to the so-called "Indo-Aryan invasions" from Central Asia similar to 3.5 ka and the establishment of the caste system, but the extent of immigration at this time remains extremely controversial. South India, on the other hand, is dominated by Dravidian languages. India displays a high level of endogamy due to its strict social boundaries, and high genetic drift as a result of long-term isolation which, together with a very complex history, makes the genetic study of Indian populations challenging. Results: We have combined a detailed, high-resolution mitogenome analysis with summaries of autosomal data and Y-chromosome lineages to establish a settlement chronology for the Indian Subcontinent. Maternal lineages document the earliest settlement similar to 55-65 ka (thousand years ago), and major population shifts in the later Pleistocene that explain previous dating discrepancies and neutrality violation. Whilst current genome-wide analyses conflate all dispersals from Southwest and Central Asia, we were able to tease out from the mitogenome data distinct dispersal episodes dating from between the Last Glacial Maximum to the Bronze Age. Moreover, we found an extremely marked sex bias by comparing the different genetic systems. Conclusions: Maternal lineages primarily reflect earlier, pre-Holocene processes, and paternal lineages predominantly episodes within the last 10 ka. In particular, genetic influx from Central Asia in the Bronze Age was strongly male-driven, consistent with the patriarchal, patrilocal and patrilineal social structure attributed to the inferred pastoralist early Indo-European society. This was part of a much wider process of Indo-European expansion, with an ultimate source in the Pontic-Caspian region, which carried closely related Y-chromosome lineages, a smaller fraction of autosomal genome-wide variation and an even smaller fraction of mitogenomes across a vast swathe of Eurasia between 5 and 3.5 ka.This work was supported by FEDER funds through COMPETE (FCOMP-01-0124FEDER-029291) and COMPETE 2020 (Project number 016899) and by national funds through the Portuguese Foundation for Science and Technology (FCT) through the research projects PTDC/IVC-ANT/4917/2012 and PTDC/EPH-ARQ/4164/2014. MS is supported by a Leverhulme Doctoral Scholarship awarded to MBR.AB, MO and TR are supported by FCT grants (SFRH/BD/78990/2011, SFRH/BD/95626/2013 and SFRH/BPD/108126/2015). PS is supported by FCT, ESF, POPH and the FCT Investigator Programme (IF/01641/2013) and acknowledges FCT I. P. and ERDF (through COMPETE2020-POCI) for CBMA's strategic programme UID/BIA/04050/2013 (POCI-01-0145-FEDER-007569). I3S is financed by FEDER funds through the COMPETE 2020-POCI, Portugal 2020, and by Portuguese funds through FCT/Ministerio da Ciencia, Tecnologia e Inovacao in the framework of the project "Institute for Research and Innovation in Health Sciences" (POCI-01-0145-FEDER-007274).info:eu-repo/semantics/publishedVersionBioMed Central (BMC)Universidade do MinhoSilva, MarinaOliveira, MarisaVieira, DanielBrandão, AndreiaRito, Teresa SPereira, Joana B.Fraser, Ross M.Hudson, BobGandini, FrancescaEdwards, CeiridwenPala, MariaKoch, JohnWilson, James F.Pereira, LuísaRichards, Martin B.Soares, Pedro2017-03-232017-03-23T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/1822/50717engSilva, M., Oliveira, M., Vieira, D., et. al. (2017). A genetic chronology for the Indian Subcontinent points to heavily sex-biased dispersals. BMC evolutionary biology, 17(1), 881471-214810.1186/s12862-017-0936-928335724https://bmcevolbiol.biomedcentral.com/articles/10.1186/s12862-017-0936-9info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:35:59ZPortal AgregadorONG
dc.title.none.fl_str_mv A genetic chronology for the Indian Subcontinent points to heavily sex-biased dispersals
title A genetic chronology for the Indian Subcontinent points to heavily sex-biased dispersals
spellingShingle A genetic chronology for the Indian Subcontinent points to heavily sex-biased dispersals
Silva, Marina
Mitochondrial DNA
Indian Subcontinent
Genome-wide
Y chromosome
Neolithic
Indo-European
Ciências Agrárias::Ciências Veterinárias
Science & Technology
title_short A genetic chronology for the Indian Subcontinent points to heavily sex-biased dispersals
title_full A genetic chronology for the Indian Subcontinent points to heavily sex-biased dispersals
title_fullStr A genetic chronology for the Indian Subcontinent points to heavily sex-biased dispersals
title_full_unstemmed A genetic chronology for the Indian Subcontinent points to heavily sex-biased dispersals
title_sort A genetic chronology for the Indian Subcontinent points to heavily sex-biased dispersals
author Silva, Marina
author_facet Silva, Marina
Oliveira, Marisa
Vieira, Daniel
Brandão, Andreia
Rito, Teresa S
Pereira, Joana B.
Fraser, Ross M.
Hudson, Bob
Gandini, Francesca
Edwards, Ceiridwen
Pala, Maria
Koch, John
Wilson, James F.
Pereira, Luísa
Richards, Martin B.
Soares, Pedro
author_role author
author2 Oliveira, Marisa
Vieira, Daniel
Brandão, Andreia
Rito, Teresa S
Pereira, Joana B.
Fraser, Ross M.
Hudson, Bob
Gandini, Francesca
Edwards, Ceiridwen
Pala, Maria
Koch, John
Wilson, James F.
Pereira, Luísa
Richards, Martin B.
Soares, Pedro
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv Silva, Marina
Oliveira, Marisa
Vieira, Daniel
Brandão, Andreia
Rito, Teresa S
Pereira, Joana B.
Fraser, Ross M.
Hudson, Bob
Gandini, Francesca
Edwards, Ceiridwen
Pala, Maria
Koch, John
Wilson, James F.
Pereira, Luísa
Richards, Martin B.
Soares, Pedro
dc.subject.por.fl_str_mv Mitochondrial DNA
Indian Subcontinent
Genome-wide
Y chromosome
Neolithic
Indo-European
Ciências Agrárias::Ciências Veterinárias
Science & Technology
topic Mitochondrial DNA
Indian Subcontinent
Genome-wide
Y chromosome
Neolithic
Indo-European
Ciências Agrárias::Ciências Veterinárias
Science & Technology
description Background: India is a patchwork of tribal and non-tribal populations that speak many different languages from various language families. Indo-European, spoken across northern and central India, and also in Pakistan and Bangladesh, has been frequently connected to the so-called "Indo-Aryan invasions" from Central Asia similar to 3.5 ka and the establishment of the caste system, but the extent of immigration at this time remains extremely controversial. South India, on the other hand, is dominated by Dravidian languages. India displays a high level of endogamy due to its strict social boundaries, and high genetic drift as a result of long-term isolation which, together with a very complex history, makes the genetic study of Indian populations challenging. Results: We have combined a detailed, high-resolution mitogenome analysis with summaries of autosomal data and Y-chromosome lineages to establish a settlement chronology for the Indian Subcontinent. Maternal lineages document the earliest settlement similar to 55-65 ka (thousand years ago), and major population shifts in the later Pleistocene that explain previous dating discrepancies and neutrality violation. Whilst current genome-wide analyses conflate all dispersals from Southwest and Central Asia, we were able to tease out from the mitogenome data distinct dispersal episodes dating from between the Last Glacial Maximum to the Bronze Age. Moreover, we found an extremely marked sex bias by comparing the different genetic systems. Conclusions: Maternal lineages primarily reflect earlier, pre-Holocene processes, and paternal lineages predominantly episodes within the last 10 ka. In particular, genetic influx from Central Asia in the Bronze Age was strongly male-driven, consistent with the patriarchal, patrilocal and patrilineal social structure attributed to the inferred pastoralist early Indo-European society. This was part of a much wider process of Indo-European expansion, with an ultimate source in the Pontic-Caspian region, which carried closely related Y-chromosome lineages, a smaller fraction of autosomal genome-wide variation and an even smaller fraction of mitogenomes across a vast swathe of Eurasia between 5 and 3.5 ka.
publishDate 2017
dc.date.none.fl_str_mv 2017-03-23
2017-03-23T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/1822/50717
url http://hdl.handle.net/1822/50717
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Silva, M., Oliveira, M., Vieira, D., et. al. (2017). A genetic chronology for the Indian Subcontinent points to heavily sex-biased dispersals. BMC evolutionary biology, 17(1), 88
1471-2148
10.1186/s12862-017-0936-9
28335724
https://bmcevolbiol.biomedcentral.com/articles/10.1186/s12862-017-0936-9
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv BioMed Central (BMC)
publisher.none.fl_str_mv BioMed Central (BMC)
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