A genome-wide linkage and association scan reveals novel loci for autism

Detalhes bibliográficos
Autor(a) principal: Weiss, LA
Data de Publicação: 2009
Outros Autores: Arking, DE, Daly, MJ, Chakravarti, A, Oliveira, G, Gene Discovery Project of Johns Hopkins & the Autism Consortium
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.4/1380
Resumo: Although autism is a highly heritable neurodevelopmental disorder, attempts to identify specific susceptibility genes have thus far met with limited success. Genome-wide association studies using half a million or more markers, particularly those with very large sample sizes achieved through meta-analysis, have shown great success in mapping genes for other complex genetic traits. Consequently, we initiated a linkage and association mapping study using half a million genome-wide single nucleotide polymorphisms (SNPs) in a common set of 1,031 multiplex autism families (1,553 affected offspring). We identified regions of suggestive and significant linkage on chromosomes 6q27 and 20p13, respectively. Initial analysis did not yield genome-wide significant associations; however, genotyping of top hits in additional families revealed an SNP on chromosome 5p15 (between SEMA5A and TAS2R1) that was significantly associated with autism (P = 2 x 10(-7)). We also demonstrated that expression of SEMA5A is reduced in brains from autistic patients, further implicating SEMA5A as an autism susceptibility gene. The linkage regions reported here provide targets for rare variation screening whereas the discovery of a single novel association demonstrates the action of common variants.
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spelling A genome-wide linkage and association scan reveals novel loci for autismPerturbação AutísticaPredisposição Genética para DoençaAlthough autism is a highly heritable neurodevelopmental disorder, attempts to identify specific susceptibility genes have thus far met with limited success. Genome-wide association studies using half a million or more markers, particularly those with very large sample sizes achieved through meta-analysis, have shown great success in mapping genes for other complex genetic traits. Consequently, we initiated a linkage and association mapping study using half a million genome-wide single nucleotide polymorphisms (SNPs) in a common set of 1,031 multiplex autism families (1,553 affected offspring). We identified regions of suggestive and significant linkage on chromosomes 6q27 and 20p13, respectively. Initial analysis did not yield genome-wide significant associations; however, genotyping of top hits in additional families revealed an SNP on chromosome 5p15 (between SEMA5A and TAS2R1) that was significantly associated with autism (P = 2 x 10(-7)). We also demonstrated that expression of SEMA5A is reduced in brains from autistic patients, further implicating SEMA5A as an autism susceptibility gene. The linkage regions reported here provide targets for rare variation screening whereas the discovery of a single novel association demonstrates the action of common variants.NatureRIHUCWeiss, LAArking, DEDaly, MJChakravarti, AOliveira, GGene Discovery Project of Johns Hopkins & the Autism Consortium2012-05-21T17:04:54Z20092009-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.4/1380engNature. 2009;461(7265):802-8.info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-11T14:22:39Zoai:rihuc.huc.min-saude.pt:10400.4/1380Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T18:03:53.872904Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv A genome-wide linkage and association scan reveals novel loci for autism
title A genome-wide linkage and association scan reveals novel loci for autism
spellingShingle A genome-wide linkage and association scan reveals novel loci for autism
Weiss, LA
Perturbação Autística
Predisposição Genética para Doença
title_short A genome-wide linkage and association scan reveals novel loci for autism
title_full A genome-wide linkage and association scan reveals novel loci for autism
title_fullStr A genome-wide linkage and association scan reveals novel loci for autism
title_full_unstemmed A genome-wide linkage and association scan reveals novel loci for autism
title_sort A genome-wide linkage and association scan reveals novel loci for autism
author Weiss, LA
author_facet Weiss, LA
Arking, DE
Daly, MJ
Chakravarti, A
Oliveira, G
Gene Discovery Project of Johns Hopkins & the Autism Consortium
author_role author
author2 Arking, DE
Daly, MJ
Chakravarti, A
Oliveira, G
Gene Discovery Project of Johns Hopkins & the Autism Consortium
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv RIHUC
dc.contributor.author.fl_str_mv Weiss, LA
Arking, DE
Daly, MJ
Chakravarti, A
Oliveira, G
Gene Discovery Project of Johns Hopkins & the Autism Consortium
dc.subject.por.fl_str_mv Perturbação Autística
Predisposição Genética para Doença
topic Perturbação Autística
Predisposição Genética para Doença
description Although autism is a highly heritable neurodevelopmental disorder, attempts to identify specific susceptibility genes have thus far met with limited success. Genome-wide association studies using half a million or more markers, particularly those with very large sample sizes achieved through meta-analysis, have shown great success in mapping genes for other complex genetic traits. Consequently, we initiated a linkage and association mapping study using half a million genome-wide single nucleotide polymorphisms (SNPs) in a common set of 1,031 multiplex autism families (1,553 affected offspring). We identified regions of suggestive and significant linkage on chromosomes 6q27 and 20p13, respectively. Initial analysis did not yield genome-wide significant associations; however, genotyping of top hits in additional families revealed an SNP on chromosome 5p15 (between SEMA5A and TAS2R1) that was significantly associated with autism (P = 2 x 10(-7)). We also demonstrated that expression of SEMA5A is reduced in brains from autistic patients, further implicating SEMA5A as an autism susceptibility gene. The linkage regions reported here provide targets for rare variation screening whereas the discovery of a single novel association demonstrates the action of common variants.
publishDate 2009
dc.date.none.fl_str_mv 2009
2009-01-01T00:00:00Z
2012-05-21T17:04:54Z
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url http://hdl.handle.net/10400.4/1380
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dc.relation.none.fl_str_mv Nature. 2009;461(7265):802-8.
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