Call recognition and individual identification of fish vocalizations based on automatic speech recognition: An example with the Lusitanian toadfish
Autor(a) principal: | |
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Data de Publicação: | 2015 |
Outros Autores: | , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10400.12/5034 |
Resumo: | The study of acoustic communication in animals often requires not only the recognition of species specific acoustic signals but also the identification of individual subjects, all in a complex acoustic background. Moreover, when very long recordings are to be analyzed, automatic recognition and identification processes are invaluable tools to extract the relevant biological information. A pattern recognition methodology based on hidden Markov models is presented inspired by successful results obtained in the most widely known and complex acoustical communication signal: human speech. This methodology was applied here for the first time to the detection and recognition of fish acoustic signals, specifically in a stream of round-the-clock recordings of Lusitanian toadfish (Halobatrachus didactylus) in their natural estuarine habitat. The results show that this methodology is able not only to detect the mating sounds (boatwhistles) but also to identify individual male toadfish, reaching an identification rate of ca. 95%. Moreover this method also proved to be a powerful tool to assess signal durations in large data sets. However, the system failed in recognizing other sound types. |
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Call recognition and individual identification of fish vocalizations based on automatic speech recognition: An example with the Lusitanian toadfishAnimalsBatrachoidiformesEcosystemHumansMaleMarkov ChainsSound SpectrographySpeech Production MeasurementAcousticsPattern RecognitionSexual BehaviorSignal ProcessingSpeech AcousticsVocalizationThe study of acoustic communication in animals often requires not only the recognition of species specific acoustic signals but also the identification of individual subjects, all in a complex acoustic background. Moreover, when very long recordings are to be analyzed, automatic recognition and identification processes are invaluable tools to extract the relevant biological information. A pattern recognition methodology based on hidden Markov models is presented inspired by successful results obtained in the most widely known and complex acoustical communication signal: human speech. This methodology was applied here for the first time to the detection and recognition of fish acoustic signals, specifically in a stream of round-the-clock recordings of Lusitanian toadfish (Halobatrachus didactylus) in their natural estuarine habitat. The results show that this methodology is able not only to detect the mating sounds (boatwhistles) but also to identify individual male toadfish, reaching an identification rate of ca. 95%. Moreover this method also proved to be a powerful tool to assess signal durations in large data sets. However, the system failed in recognizing other sound types.Fundação para a Ciência e a Tecnologia (FCT)Acoustical Society of AmericaRepositório do ISPAVieira, ManuelFonseca, Paulo JorgeAmorim, Maria Clara PessoaTeixeira, Carlos J. C.2016-11-07T20:04:05Z2015-01-01T00:00:00Z2015-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.12/5034engJournal of the Acoustical Society of America, 138, 3941-3950. Doi: 10.1121/1.49368580001-496610.1121/1.4936858info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2022-09-05T16:40:46Zoai:repositorio.ispa.pt:10400.12/5034Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T15:22:52.220632Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Call recognition and individual identification of fish vocalizations based on automatic speech recognition: An example with the Lusitanian toadfish |
title |
Call recognition and individual identification of fish vocalizations based on automatic speech recognition: An example with the Lusitanian toadfish |
spellingShingle |
Call recognition and individual identification of fish vocalizations based on automatic speech recognition: An example with the Lusitanian toadfish Vieira, Manuel Animals Batrachoidiformes Ecosystem Humans Male Markov Chains Sound Spectrography Speech Production Measurement Acoustics Pattern Recognition Sexual Behavior Signal Processing Speech Acoustics Vocalization |
title_short |
Call recognition and individual identification of fish vocalizations based on automatic speech recognition: An example with the Lusitanian toadfish |
title_full |
Call recognition and individual identification of fish vocalizations based on automatic speech recognition: An example with the Lusitanian toadfish |
title_fullStr |
Call recognition and individual identification of fish vocalizations based on automatic speech recognition: An example with the Lusitanian toadfish |
title_full_unstemmed |
Call recognition and individual identification of fish vocalizations based on automatic speech recognition: An example with the Lusitanian toadfish |
title_sort |
Call recognition and individual identification of fish vocalizations based on automatic speech recognition: An example with the Lusitanian toadfish |
author |
Vieira, Manuel |
author_facet |
Vieira, Manuel Fonseca, Paulo Jorge Amorim, Maria Clara Pessoa Teixeira, Carlos J. C. |
author_role |
author |
author2 |
Fonseca, Paulo Jorge Amorim, Maria Clara Pessoa Teixeira, Carlos J. C. |
author2_role |
author author author |
dc.contributor.none.fl_str_mv |
Repositório do ISPA |
dc.contributor.author.fl_str_mv |
Vieira, Manuel Fonseca, Paulo Jorge Amorim, Maria Clara Pessoa Teixeira, Carlos J. C. |
dc.subject.por.fl_str_mv |
Animals Batrachoidiformes Ecosystem Humans Male Markov Chains Sound Spectrography Speech Production Measurement Acoustics Pattern Recognition Sexual Behavior Signal Processing Speech Acoustics Vocalization |
topic |
Animals Batrachoidiformes Ecosystem Humans Male Markov Chains Sound Spectrography Speech Production Measurement Acoustics Pattern Recognition Sexual Behavior Signal Processing Speech Acoustics Vocalization |
description |
The study of acoustic communication in animals often requires not only the recognition of species specific acoustic signals but also the identification of individual subjects, all in a complex acoustic background. Moreover, when very long recordings are to be analyzed, automatic recognition and identification processes are invaluable tools to extract the relevant biological information. A pattern recognition methodology based on hidden Markov models is presented inspired by successful results obtained in the most widely known and complex acoustical communication signal: human speech. This methodology was applied here for the first time to the detection and recognition of fish acoustic signals, specifically in a stream of round-the-clock recordings of Lusitanian toadfish (Halobatrachus didactylus) in their natural estuarine habitat. The results show that this methodology is able not only to detect the mating sounds (boatwhistles) but also to identify individual male toadfish, reaching an identification rate of ca. 95%. Moreover this method also proved to be a powerful tool to assess signal durations in large data sets. However, the system failed in recognizing other sound types. |
publishDate |
2015 |
dc.date.none.fl_str_mv |
2015-01-01T00:00:00Z 2015-01-01T00:00:00Z 2016-11-07T20:04:05Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10400.12/5034 |
url |
http://hdl.handle.net/10400.12/5034 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Journal of the Acoustical Society of America, 138, 3941-3950. Doi: 10.1121/1.4936858 0001-4966 10.1121/1.4936858 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Acoustical Society of America |
publisher.none.fl_str_mv |
Acoustical Society of America |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
instname_str |
Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
repository.mail.fl_str_mv |
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1817550519020814336 |