MLPA analysis in a cohort of patients with autism

Detalhes bibliográficos
Autor(a) principal: Peixoto, Sara
Data de Publicação: 2017
Outros Autores: Melo, Joana B., Ferrão, José, Pires, Luís M., Lavoura, Nuno, Pinto, Marta, Oliveira, Guiomar, Carreira, Isabel M.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10316/108276
https://doi.org/10.1186/s13039-017-0302-z
Resumo: Background: Autism is a global neurodevelopmental disorder which generally manifests during the first 2 years and continues throughout life, with a range of symptomatic variations. Epidemiological studies show an important role of genetic factors in autism and several susceptible regions and genes have been identified. The aim of our study was to validate a cost-effective set of commercial Multiplex Ligation dependent Probe Amplification (MLPA) and methylation specific multiplex ligation dependent probe amplification (MS-MLPA) test in autistic children refered by the neurodevelopmental center and autism unit of a Paediatric Hospital. Results: In this study 150 unrelated children with autism spectrum disorders were analysed for copy number variation in specific regions of chromosomes 15, 16 and 22, using MLPA. All the patients had been previously studied by conventional karyotype and fluorescence in situ hybridization (FISH) analysis for 15(q11.2q13) and, with these techniques, four alterations were identified. The MLPA technique confirmed these four and identified further six alterations by the combined application of the two different panels. Conclusions: Our data show that MLPA is a cost effective straightforward and rapid method for detection of imbalances in a clinically characterized population with autism. It contributes to strengthen the relationship between genotype and phenotype of children with autism, showing the clinical difference between deletions and duplications.
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spelling MLPA analysis in a cohort of patients with autismAutismAutism spectrum disordersCopy number variantsGenotypeMultiplex Ligation-dependent Probe Amplification (MLPA)Methylation Specific Multiplex Ligation-dependent Probe Amplification (MS-MLPA)PhenotypeBackground: Autism is a global neurodevelopmental disorder which generally manifests during the first 2 years and continues throughout life, with a range of symptomatic variations. Epidemiological studies show an important role of genetic factors in autism and several susceptible regions and genes have been identified. The aim of our study was to validate a cost-effective set of commercial Multiplex Ligation dependent Probe Amplification (MLPA) and methylation specific multiplex ligation dependent probe amplification (MS-MLPA) test in autistic children refered by the neurodevelopmental center and autism unit of a Paediatric Hospital. Results: In this study 150 unrelated children with autism spectrum disorders were analysed for copy number variation in specific regions of chromosomes 15, 16 and 22, using MLPA. All the patients had been previously studied by conventional karyotype and fluorescence in situ hybridization (FISH) analysis for 15(q11.2q13) and, with these techniques, four alterations were identified. The MLPA technique confirmed these four and identified further six alterations by the combined application of the two different panels. Conclusions: Our data show that MLPA is a cost effective straightforward and rapid method for detection of imbalances in a clinically characterized population with autism. It contributes to strengthen the relationship between genotype and phenotype of children with autism, showing the clinical difference between deletions and duplications.Springer Nature2017info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/10316/108276http://hdl.handle.net/10316/108276https://doi.org/10.1186/s13039-017-0302-zeng1755-8166Peixoto, SaraMelo, Joana B.Ferrão, JoséPires, Luís M.Lavoura, NunoPinto, MartaOliveira, GuiomarCarreira, Isabel M.info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-10-04T10:19:33Zoai:estudogeral.uc.pt:10316/108276Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T21:24:34.972152Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv MLPA analysis in a cohort of patients with autism
title MLPA analysis in a cohort of patients with autism
spellingShingle MLPA analysis in a cohort of patients with autism
Peixoto, Sara
Autism
Autism spectrum disorders
Copy number variants
Genotype
Multiplex Ligation-dependent Probe Amplification (MLPA)
Methylation Specific Multiplex Ligation-dependent Probe Amplification (MS-MLPA)
Phenotype
title_short MLPA analysis in a cohort of patients with autism
title_full MLPA analysis in a cohort of patients with autism
title_fullStr MLPA analysis in a cohort of patients with autism
title_full_unstemmed MLPA analysis in a cohort of patients with autism
title_sort MLPA analysis in a cohort of patients with autism
author Peixoto, Sara
author_facet Peixoto, Sara
Melo, Joana B.
Ferrão, José
Pires, Luís M.
Lavoura, Nuno
Pinto, Marta
Oliveira, Guiomar
Carreira, Isabel M.
author_role author
author2 Melo, Joana B.
Ferrão, José
Pires, Luís M.
Lavoura, Nuno
Pinto, Marta
Oliveira, Guiomar
Carreira, Isabel M.
author2_role author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Peixoto, Sara
Melo, Joana B.
Ferrão, José
Pires, Luís M.
Lavoura, Nuno
Pinto, Marta
Oliveira, Guiomar
Carreira, Isabel M.
dc.subject.por.fl_str_mv Autism
Autism spectrum disorders
Copy number variants
Genotype
Multiplex Ligation-dependent Probe Amplification (MLPA)
Methylation Specific Multiplex Ligation-dependent Probe Amplification (MS-MLPA)
Phenotype
topic Autism
Autism spectrum disorders
Copy number variants
Genotype
Multiplex Ligation-dependent Probe Amplification (MLPA)
Methylation Specific Multiplex Ligation-dependent Probe Amplification (MS-MLPA)
Phenotype
description Background: Autism is a global neurodevelopmental disorder which generally manifests during the first 2 years and continues throughout life, with a range of symptomatic variations. Epidemiological studies show an important role of genetic factors in autism and several susceptible regions and genes have been identified. The aim of our study was to validate a cost-effective set of commercial Multiplex Ligation dependent Probe Amplification (MLPA) and methylation specific multiplex ligation dependent probe amplification (MS-MLPA) test in autistic children refered by the neurodevelopmental center and autism unit of a Paediatric Hospital. Results: In this study 150 unrelated children with autism spectrum disorders were analysed for copy number variation in specific regions of chromosomes 15, 16 and 22, using MLPA. All the patients had been previously studied by conventional karyotype and fluorescence in situ hybridization (FISH) analysis for 15(q11.2q13) and, with these techniques, four alterations were identified. The MLPA technique confirmed these four and identified further six alterations by the combined application of the two different panels. Conclusions: Our data show that MLPA is a cost effective straightforward and rapid method for detection of imbalances in a clinically characterized population with autism. It contributes to strengthen the relationship between genotype and phenotype of children with autism, showing the clinical difference between deletions and duplications.
publishDate 2017
dc.date.none.fl_str_mv 2017
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10316/108276
http://hdl.handle.net/10316/108276
https://doi.org/10.1186/s13039-017-0302-z
url http://hdl.handle.net/10316/108276
https://doi.org/10.1186/s13039-017-0302-z
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 1755-8166
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dc.publisher.none.fl_str_mv Springer Nature
publisher.none.fl_str_mv Springer Nature
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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