Characterization of a large cluster of HIV-1 A1 infections detected in Portugal and connected to several Western European countries

Detalhes bibliográficos
Autor(a) principal: Araújo, PM
Data de Publicação: 2019
Outros Autores: Carvalho, A, Pingarilho, M, Abecasis, AB, Osório, NS
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.23/1324
Resumo: HIV-1 subtypes associate with differences in transmission and disease progression. Thus, the existence of geographic hotspots of subtype diversity deepens the complexity of HIV-1/AIDS control. The already high subtype diversity in Portugal seems to be increasing due to infections with sub-subtype A1 virus. We performed phylogenetic analysis of 65 A1 sequences newly obtained from 14 Portuguese hospitals and 425 closely related database sequences. 80% of the A1 Portuguese isolates gathered in a main phylogenetic clade (MA1). Six transmission clusters were identified in MA1, encompassing isolates from Portugal, Spain, France, and United Kingdom. The most common transmission route identified was men who have sex with men. The origin of the MA1 was linked to Greece, with the first introduction to Portugal dating back to 1996 (95% HPD: 1993.6-1999.2). Individuals infected with MA1 virus revealed lower viral loads and higher CD4+ T-cell counts in comparison with those infected by subtype B. The expanding A1 clusters in Portugal are connected to other European countries and share a recent common ancestor with the Greek A1 outbreak. The recent expansion of this HIV-1 subtype might be related to a slower disease progression leading to a population level delay in its diagnostic.
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spelling Characterization of a large cluster of HIV-1 A1 infections detected in Portugal and connected to several Western European countriesInfecção por HIVHIV-1 subtypes associate with differences in transmission and disease progression. Thus, the existence of geographic hotspots of subtype diversity deepens the complexity of HIV-1/AIDS control. The already high subtype diversity in Portugal seems to be increasing due to infections with sub-subtype A1 virus. We performed phylogenetic analysis of 65 A1 sequences newly obtained from 14 Portuguese hospitals and 425 closely related database sequences. 80% of the A1 Portuguese isolates gathered in a main phylogenetic clade (MA1). Six transmission clusters were identified in MA1, encompassing isolates from Portugal, Spain, France, and United Kingdom. The most common transmission route identified was men who have sex with men. The origin of the MA1 was linked to Greece, with the first introduction to Portugal dating back to 1996 (95% HPD: 1993.6-1999.2). Individuals infected with MA1 virus revealed lower viral loads and higher CD4+ T-cell counts in comparison with those infected by subtype B. The expanding A1 clusters in Portugal are connected to other European countries and share a recent common ancestor with the Greek A1 outbreak. The recent expansion of this HIV-1 subtype might be related to a slower disease progression leading to a population level delay in its diagnostic.Repositório Científico do Hospital de BragaAraújo, PMCarvalho, APingarilho, MAbecasis, ABOsório, NS2019-05-16T12:50:26Z2019-05-10T00:00:00Z2019-05-10T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.23/1324engSci Rep. 2019 May 10;9(1):7223.10.1038/s41598-019-43420-2info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2022-09-21T09:03:14Zoai:repositorio.hospitaldebraga.pt:10400.23/1324Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T15:55:51.196160Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Characterization of a large cluster of HIV-1 A1 infections detected in Portugal and connected to several Western European countries
title Characterization of a large cluster of HIV-1 A1 infections detected in Portugal and connected to several Western European countries
spellingShingle Characterization of a large cluster of HIV-1 A1 infections detected in Portugal and connected to several Western European countries
Araújo, PM
Infecção por HIV
title_short Characterization of a large cluster of HIV-1 A1 infections detected in Portugal and connected to several Western European countries
title_full Characterization of a large cluster of HIV-1 A1 infections detected in Portugal and connected to several Western European countries
title_fullStr Characterization of a large cluster of HIV-1 A1 infections detected in Portugal and connected to several Western European countries
title_full_unstemmed Characterization of a large cluster of HIV-1 A1 infections detected in Portugal and connected to several Western European countries
title_sort Characterization of a large cluster of HIV-1 A1 infections detected in Portugal and connected to several Western European countries
author Araújo, PM
author_facet Araújo, PM
Carvalho, A
Pingarilho, M
Abecasis, AB
Osório, NS
author_role author
author2 Carvalho, A
Pingarilho, M
Abecasis, AB
Osório, NS
author2_role author
author
author
author
dc.contributor.none.fl_str_mv Repositório Científico do Hospital de Braga
dc.contributor.author.fl_str_mv Araújo, PM
Carvalho, A
Pingarilho, M
Abecasis, AB
Osório, NS
dc.subject.por.fl_str_mv Infecção por HIV
topic Infecção por HIV
description HIV-1 subtypes associate with differences in transmission and disease progression. Thus, the existence of geographic hotspots of subtype diversity deepens the complexity of HIV-1/AIDS control. The already high subtype diversity in Portugal seems to be increasing due to infections with sub-subtype A1 virus. We performed phylogenetic analysis of 65 A1 sequences newly obtained from 14 Portuguese hospitals and 425 closely related database sequences. 80% of the A1 Portuguese isolates gathered in a main phylogenetic clade (MA1). Six transmission clusters were identified in MA1, encompassing isolates from Portugal, Spain, France, and United Kingdom. The most common transmission route identified was men who have sex with men. The origin of the MA1 was linked to Greece, with the first introduction to Portugal dating back to 1996 (95% HPD: 1993.6-1999.2). Individuals infected with MA1 virus revealed lower viral loads and higher CD4+ T-cell counts in comparison with those infected by subtype B. The expanding A1 clusters in Portugal are connected to other European countries and share a recent common ancestor with the Greek A1 outbreak. The recent expansion of this HIV-1 subtype might be related to a slower disease progression leading to a population level delay in its diagnostic.
publishDate 2019
dc.date.none.fl_str_mv 2019-05-16T12:50:26Z
2019-05-10T00:00:00Z
2019-05-10T00:00:00Z
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dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.23/1324
url http://hdl.handle.net/10400.23/1324
dc.language.iso.fl_str_mv eng
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dc.relation.none.fl_str_mv Sci Rep. 2019 May 10;9(1):7223.
10.1038/s41598-019-43420-2
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