Landscape effects on gene flow of the Brown bear (Ursus arctos) on the Cantabrian Mountains

Detalhes bibliográficos
Autor(a) principal: Barbosa, Ana Rute Silva
Data de Publicação: 2021
Tipo de documento: Dissertação
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10773/33533
Resumo: As one of the smallest populations in Europe, the Cantabrian brown bear population is threatened, isolated and fragmented in two subpopulations. Despite the low connectivity between both subpopulations, the Cantabrian brown bear population has been recovering over the years and is the only one in Europe that has not been subject to populations reinforcements. However, a difference in the recovery rates has characterizes these two subpopulations (Western and Eastern) over the years. Understanding the environmental features that may be shaping the ecological characteristics of the subpopulations in the Cantabrian range, such as patterns of gene flow along their distribution, are of extreme importance for their conservation and recovery. In this study, microsatellites (nuclear autosomal markers and sex markers) were used to investigate the genetic structure of subpopulations. This analysis was carried out by assessing the correlation between genetic differences and landscape resistance models. Several functional relationships between genetic distances, land cover, temperature, elevation and human disturbance were also analyzed, thus testing for isolation by resistance (IBR) within each subpopulation. Additionally, isolation by distance (IBD) within each population was tested. All hypotheses were tested according to the reciprocal causal modelling method. Results show that agriculture/pastures (hyp2), agriculture/pastures + open areas (hyp13) and forest + agriculture/pastures (hyp9) were the supported landscape resistance models by reciprocal causal modelling, applied in each subpopulation. In the Western subpopulation hyp13 demonstrate the highest relative support (0.040441), and the model contained in this hypothesis was considered as the best. Gene flow in Western subpopulation is maximum in agriculture/pastures + open areas (Agr+Open) whereas in Eastern subpopulation is maximum in forest + agriculture/pastures (Forest+Agr). Western brown bears are dependent of ecosystems where agricultural, pasture and open areas covers are predominant. Eastern brown bears are dependent of ecosystems where forested, agricultural and pasture covers are most prominent. This study reveals a difference between the features that are drivers to gene flow in both subpopulation and provides new insights on the patterns of gene flow in the Cantabrian brown bear subpopulation. Conservation strategies are important to ensure the subpopulations viability and results obtained here will assist in the definition of new measures, thus promoting a more effective recovery of the threatened Cantabrian Mountain population.
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spelling Landscape effects on gene flow of the Brown bear (Ursus arctos) on the Cantabrian MountainsReciprocal causal modellingMicrosatellitesLandscape geneticsForestHumanazed landscapeOpen areasAs one of the smallest populations in Europe, the Cantabrian brown bear population is threatened, isolated and fragmented in two subpopulations. Despite the low connectivity between both subpopulations, the Cantabrian brown bear population has been recovering over the years and is the only one in Europe that has not been subject to populations reinforcements. However, a difference in the recovery rates has characterizes these two subpopulations (Western and Eastern) over the years. Understanding the environmental features that may be shaping the ecological characteristics of the subpopulations in the Cantabrian range, such as patterns of gene flow along their distribution, are of extreme importance for their conservation and recovery. In this study, microsatellites (nuclear autosomal markers and sex markers) were used to investigate the genetic structure of subpopulations. This analysis was carried out by assessing the correlation between genetic differences and landscape resistance models. Several functional relationships between genetic distances, land cover, temperature, elevation and human disturbance were also analyzed, thus testing for isolation by resistance (IBR) within each subpopulation. Additionally, isolation by distance (IBD) within each population was tested. All hypotheses were tested according to the reciprocal causal modelling method. Results show that agriculture/pastures (hyp2), agriculture/pastures + open areas (hyp13) and forest + agriculture/pastures (hyp9) were the supported landscape resistance models by reciprocal causal modelling, applied in each subpopulation. In the Western subpopulation hyp13 demonstrate the highest relative support (0.040441), and the model contained in this hypothesis was considered as the best. Gene flow in Western subpopulation is maximum in agriculture/pastures + open areas (Agr+Open) whereas in Eastern subpopulation is maximum in forest + agriculture/pastures (Forest+Agr). Western brown bears are dependent of ecosystems where agricultural, pasture and open areas covers are predominant. Eastern brown bears are dependent of ecosystems where forested, agricultural and pasture covers are most prominent. This study reveals a difference between the features that are drivers to gene flow in both subpopulation and provides new insights on the patterns of gene flow in the Cantabrian brown bear subpopulation. Conservation strategies are important to ensure the subpopulations viability and results obtained here will assist in the definition of new measures, thus promoting a more effective recovery of the threatened Cantabrian Mountain population.Sendo uma das populações mais pequenas da Europa, a população Cantábrica de urso pardo encontra-se ameaçada, isolada e fragmentada em duas subpopulações. Apesar da baixa conectividade entre ambas as subpopulações, a população Cantábrica de urso pardo tem vindo a recuperar ao longo dos anos, sendo a única na Europa que não foi alvo de reforços populacionais. Contudo, uma diferença nos ritmos de recuperação tem caracterizado estas duas subpopulações (Ocidental e Oriental) ao longo dos anos. Compreender as características ambientais que podem estar a moldar as características ecológicas das subpopulações da cordilheira Cantábrica, como os padrões de fluxo genético ao longo da sua distribuição, são de extrema importância para a sua conservação e recuperação. Neste estudo, para a investigação da estrutura genética das subpopulações foram utilizados microssatélites (marcadores nucleares autossómicos e marcadores sexuais). Essa análise foi realizada através da avaliação da correlação entre as diferenças genéticas e modelos de resistência da paisagem. Foram ainda analisadas várias relações funcionais entre distâncias genéticas, cobertura de solo, temperatura, elevação e perturbação humana, testando assim o isolamento por resistência (IBR) dentro de cada subpopulação. Adicionalmente foi testado o isolamento por distância (IBD) dentro de cada população. Todas as hipóteses foram testadas segundo o método de modelação causal recíproca. Os resultados demonstram que áreas agrícolas/pastagem (hyp2), áreas agrícolas/pastagem + áreas abertas (hyp13), e áreas de florestas + áreas agrícolas/pastagem (hyp9) foram os modelos de resistência à paisagem suportados pela modelação causal recíproca, aplicada em cada subpopulação. Na subpopulação Ocidental, hyp13 demostrou maior suporte relativo (0.040441), sendo o modelo contido nesta hipótese considerado como o melhor. O fluxo genético da subpopulação Ocidental é máximo nas áreas agrícolas/pastagem + áreas abertas (Agr+Open), enquanto que na subpopulação Oriental este é máximo em áreas de florestas+ áreas agrícolas/pastagem (Forest+Agr). Os ursos ocidentais são dependentes de ecossistemas onde o coberto predominante são as áreas agrícolas, pastagem e áreas abertas. Os ursos orientais são dependentes de ecossistemas onde o coberto proeminente é composto por áreas de floresta, agrícolas e de pastagem. Este estudo revelou uma diferença entre as características que atuam como promotoras do fluxo genético em ambas as subpopulações e providencia novas perspetivas sobre os padrões de fluxo genético na população de urso-pardo da Cantábria. As estratégias de conservação são importantes para assegurar a viabilidade das subpopulações e os resultados aqui obtidos iram auxiliar na definição de novas medidas, promovendo assim uma recuperação mais efetiva da ameaçada população da cordilheira Cantábrica.2022-12-21T00:00:00Z2021-12-10T00:00:00Z2021-12-10info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfhttp://hdl.handle.net/10773/33533engBarbosa, Ana Rute Silvainfo:eu-repo/semantics/embargoedAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-02-22T12:04:33Zoai:ria.ua.pt:10773/33533Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T03:04:57.325121Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Landscape effects on gene flow of the Brown bear (Ursus arctos) on the Cantabrian Mountains
title Landscape effects on gene flow of the Brown bear (Ursus arctos) on the Cantabrian Mountains
spellingShingle Landscape effects on gene flow of the Brown bear (Ursus arctos) on the Cantabrian Mountains
Barbosa, Ana Rute Silva
Reciprocal causal modelling
Microsatellites
Landscape genetics
Forest
Humanazed landscape
Open areas
title_short Landscape effects on gene flow of the Brown bear (Ursus arctos) on the Cantabrian Mountains
title_full Landscape effects on gene flow of the Brown bear (Ursus arctos) on the Cantabrian Mountains
title_fullStr Landscape effects on gene flow of the Brown bear (Ursus arctos) on the Cantabrian Mountains
title_full_unstemmed Landscape effects on gene flow of the Brown bear (Ursus arctos) on the Cantabrian Mountains
title_sort Landscape effects on gene flow of the Brown bear (Ursus arctos) on the Cantabrian Mountains
author Barbosa, Ana Rute Silva
author_facet Barbosa, Ana Rute Silva
author_role author
dc.contributor.author.fl_str_mv Barbosa, Ana Rute Silva
dc.subject.por.fl_str_mv Reciprocal causal modelling
Microsatellites
Landscape genetics
Forest
Humanazed landscape
Open areas
topic Reciprocal causal modelling
Microsatellites
Landscape genetics
Forest
Humanazed landscape
Open areas
description As one of the smallest populations in Europe, the Cantabrian brown bear population is threatened, isolated and fragmented in two subpopulations. Despite the low connectivity between both subpopulations, the Cantabrian brown bear population has been recovering over the years and is the only one in Europe that has not been subject to populations reinforcements. However, a difference in the recovery rates has characterizes these two subpopulations (Western and Eastern) over the years. Understanding the environmental features that may be shaping the ecological characteristics of the subpopulations in the Cantabrian range, such as patterns of gene flow along their distribution, are of extreme importance for their conservation and recovery. In this study, microsatellites (nuclear autosomal markers and sex markers) were used to investigate the genetic structure of subpopulations. This analysis was carried out by assessing the correlation between genetic differences and landscape resistance models. Several functional relationships between genetic distances, land cover, temperature, elevation and human disturbance were also analyzed, thus testing for isolation by resistance (IBR) within each subpopulation. Additionally, isolation by distance (IBD) within each population was tested. All hypotheses were tested according to the reciprocal causal modelling method. Results show that agriculture/pastures (hyp2), agriculture/pastures + open areas (hyp13) and forest + agriculture/pastures (hyp9) were the supported landscape resistance models by reciprocal causal modelling, applied in each subpopulation. In the Western subpopulation hyp13 demonstrate the highest relative support (0.040441), and the model contained in this hypothesis was considered as the best. Gene flow in Western subpopulation is maximum in agriculture/pastures + open areas (Agr+Open) whereas in Eastern subpopulation is maximum in forest + agriculture/pastures (Forest+Agr). Western brown bears are dependent of ecosystems where agricultural, pasture and open areas covers are predominant. Eastern brown bears are dependent of ecosystems where forested, agricultural and pasture covers are most prominent. This study reveals a difference between the features that are drivers to gene flow in both subpopulation and provides new insights on the patterns of gene flow in the Cantabrian brown bear subpopulation. Conservation strategies are important to ensure the subpopulations viability and results obtained here will assist in the definition of new measures, thus promoting a more effective recovery of the threatened Cantabrian Mountain population.
publishDate 2021
dc.date.none.fl_str_mv 2021-12-10T00:00:00Z
2021-12-10
2022-12-21T00:00:00Z
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