Bioactivity assessment of indian origin-mangrove actinobacteria against candida albicans
Autor(a) principal: | |
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Data de Publicação: | 2018 |
Outros Autores: | , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | https://hdl.handle.net/10216/120473 |
Resumo: | Actinobacteria is found to have a potent metabolic activity against pathogens. The present study reveals the assessment of potent antifungal secondary metabolites from actinobacteria isolated from Indian marine mangrove sediments. The samples were collected from the coastal regions of Muthupet, Andaman and the Nicobar Islands. Identification was carried out using 16S rRNA analysis and biosynthetic genes (Polyketide synthase type I/II and Non-ribosomal peptide synthase) were screened. Actinobacteria were assayed for their antifungal activity against 16 clinical Candida albicans and the compound analysis was performed using gas chromatography-mass spectrometry GC-MS. The 31 actinobacterial strains were isolated and 16S rRNA gene sequencing revealed that this ecosystem is rich on actinobacteria, with Streptomyces as the predominant genus. The PCR based screening of biosynthetic genes revealed the presence of PKS-I in six strains, PKS-II in four strains and NRPS in 11 strains. The isolated actinobacteria VITGAP240 and VITGAP241 (two isolates) were found to have a potential antifungal activity against all the tested C. albicans. GC-MS results revealed that the actinobacterial compounds were belonging to heterocyclic, polyketides and peptides. Overall, the strains possess a wide spectrum of antifungal properties which affords the production of significant bioactive metabolites as potential antibiotics. © 2018 by the authors. |
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Bioactivity assessment of indian origin-mangrove actinobacteria against candida albicansActinobacteria extractantibiotic agentantifungal agentnonribosomal peptide synthetasepolyketide synthasepolyketide synthase type Ipolyketide synthase type IIRNA 16Sunclassified drugantifungal agentRNA 16SActinobacteriaAndaman and Nicobar Islandsantifungal activityArticlebacterial strainbacterium identificationbacterium isolateCandida albicanscontrolled studydrug isolationdrug screeningdrug synthesisecosystemgene sequencegenetic screeningmangrovemass fragmentographymetabolitenonhumannucleotide sequencephylogenyRNA analysissedimentStreptomycesActinobacteriaCandida albicanschemistrydrug effectgeneticsIndiamicrobial sensitivity testmicrobiologyRhizophoraceaeActinobacteriaAntifungal AgentsCandida albicansGas Chromatography-Mass SpectrometryGeologic SedimentsIndiaMicrobial Sensitivity TestsRhizophoraceaeRNA, Ribosomal, 16SStreptomycesActinobacteria is found to have a potent metabolic activity against pathogens. The present study reveals the assessment of potent antifungal secondary metabolites from actinobacteria isolated from Indian marine mangrove sediments. The samples were collected from the coastal regions of Muthupet, Andaman and the Nicobar Islands. Identification was carried out using 16S rRNA analysis and biosynthetic genes (Polyketide synthase type I/II and Non-ribosomal peptide synthase) were screened. Actinobacteria were assayed for their antifungal activity against 16 clinical Candida albicans and the compound analysis was performed using gas chromatography-mass spectrometry GC-MS. The 31 actinobacterial strains were isolated and 16S rRNA gene sequencing revealed that this ecosystem is rich on actinobacteria, with Streptomyces as the predominant genus. The PCR based screening of biosynthetic genes revealed the presence of PKS-I in six strains, PKS-II in four strains and NRPS in 11 strains. The isolated actinobacteria VITGAP240 and VITGAP241 (two isolates) were found to have a potential antifungal activity against all the tested C. albicans. GC-MS results revealed that the actinobacterial compounds were belonging to heterocyclic, polyketides and peptides. Overall, the strains possess a wide spectrum of antifungal properties which affords the production of significant bioactive metabolites as potential antibiotics. © 2018 by the authors.MDPI20182018-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttps://hdl.handle.net/10216/120473eng1660339710.3390/md16020060Kumar J.G.S.P.Gomathi A.Gothandam K.M.Vasconcelos V.info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-11-29T13:50:21Zoai:repositorio-aberto.up.pt:10216/120473Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T23:48:57.925525Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Bioactivity assessment of indian origin-mangrove actinobacteria against candida albicans |
title |
Bioactivity assessment of indian origin-mangrove actinobacteria against candida albicans |
spellingShingle |
Bioactivity assessment of indian origin-mangrove actinobacteria against candida albicans Kumar J.G.S.P. Actinobacteria extract antibiotic agent antifungal agent nonribosomal peptide synthetase polyketide synthase polyketide synthase type I polyketide synthase type II RNA 16S unclassified drug antifungal agent RNA 16S Actinobacteria Andaman and Nicobar Islands antifungal activity Article bacterial strain bacterium identification bacterium isolate Candida albicans controlled study drug isolation drug screening drug synthesis ecosystem gene sequence genetic screening mangrove mass fragmentography metabolite nonhuman nucleotide sequence phylogeny RNA analysis sediment Streptomyces Actinobacteria Candida albicans chemistry drug effect genetics India microbial sensitivity test microbiology Rhizophoraceae Actinobacteria Antifungal Agents Candida albicans Gas Chromatography-Mass Spectrometry Geologic Sediments India Microbial Sensitivity Tests Rhizophoraceae RNA, Ribosomal, 16S Streptomyces |
title_short |
Bioactivity assessment of indian origin-mangrove actinobacteria against candida albicans |
title_full |
Bioactivity assessment of indian origin-mangrove actinobacteria against candida albicans |
title_fullStr |
Bioactivity assessment of indian origin-mangrove actinobacteria against candida albicans |
title_full_unstemmed |
Bioactivity assessment of indian origin-mangrove actinobacteria against candida albicans |
title_sort |
Bioactivity assessment of indian origin-mangrove actinobacteria against candida albicans |
author |
Kumar J.G.S.P. |
author_facet |
Kumar J.G.S.P. Gomathi A. Gothandam K.M. Vasconcelos V. |
author_role |
author |
author2 |
Gomathi A. Gothandam K.M. Vasconcelos V. |
author2_role |
author author author |
dc.contributor.author.fl_str_mv |
Kumar J.G.S.P. Gomathi A. Gothandam K.M. Vasconcelos V. |
dc.subject.por.fl_str_mv |
Actinobacteria extract antibiotic agent antifungal agent nonribosomal peptide synthetase polyketide synthase polyketide synthase type I polyketide synthase type II RNA 16S unclassified drug antifungal agent RNA 16S Actinobacteria Andaman and Nicobar Islands antifungal activity Article bacterial strain bacterium identification bacterium isolate Candida albicans controlled study drug isolation drug screening drug synthesis ecosystem gene sequence genetic screening mangrove mass fragmentography metabolite nonhuman nucleotide sequence phylogeny RNA analysis sediment Streptomyces Actinobacteria Candida albicans chemistry drug effect genetics India microbial sensitivity test microbiology Rhizophoraceae Actinobacteria Antifungal Agents Candida albicans Gas Chromatography-Mass Spectrometry Geologic Sediments India Microbial Sensitivity Tests Rhizophoraceae RNA, Ribosomal, 16S Streptomyces |
topic |
Actinobacteria extract antibiotic agent antifungal agent nonribosomal peptide synthetase polyketide synthase polyketide synthase type I polyketide synthase type II RNA 16S unclassified drug antifungal agent RNA 16S Actinobacteria Andaman and Nicobar Islands antifungal activity Article bacterial strain bacterium identification bacterium isolate Candida albicans controlled study drug isolation drug screening drug synthesis ecosystem gene sequence genetic screening mangrove mass fragmentography metabolite nonhuman nucleotide sequence phylogeny RNA analysis sediment Streptomyces Actinobacteria Candida albicans chemistry drug effect genetics India microbial sensitivity test microbiology Rhizophoraceae Actinobacteria Antifungal Agents Candida albicans Gas Chromatography-Mass Spectrometry Geologic Sediments India Microbial Sensitivity Tests Rhizophoraceae RNA, Ribosomal, 16S Streptomyces |
description |
Actinobacteria is found to have a potent metabolic activity against pathogens. The present study reveals the assessment of potent antifungal secondary metabolites from actinobacteria isolated from Indian marine mangrove sediments. The samples were collected from the coastal regions of Muthupet, Andaman and the Nicobar Islands. Identification was carried out using 16S rRNA analysis and biosynthetic genes (Polyketide synthase type I/II and Non-ribosomal peptide synthase) were screened. Actinobacteria were assayed for their antifungal activity against 16 clinical Candida albicans and the compound analysis was performed using gas chromatography-mass spectrometry GC-MS. The 31 actinobacterial strains were isolated and 16S rRNA gene sequencing revealed that this ecosystem is rich on actinobacteria, with Streptomyces as the predominant genus. The PCR based screening of biosynthetic genes revealed the presence of PKS-I in six strains, PKS-II in four strains and NRPS in 11 strains. The isolated actinobacteria VITGAP240 and VITGAP241 (two isolates) were found to have a potential antifungal activity against all the tested C. albicans. GC-MS results revealed that the actinobacterial compounds were belonging to heterocyclic, polyketides and peptides. Overall, the strains possess a wide spectrum of antifungal properties which affords the production of significant bioactive metabolites as potential antibiotics. © 2018 by the authors. |
publishDate |
2018 |
dc.date.none.fl_str_mv |
2018 2018-01-01T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://hdl.handle.net/10216/120473 |
url |
https://hdl.handle.net/10216/120473 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
16603397 10.3390/md16020060 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
MDPI |
publisher.none.fl_str_mv |
MDPI |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
instname_str |
Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
repository.mail.fl_str_mv |
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1799135808574193665 |